; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G014940 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G014940
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionfasciclin-like arabinogalactan protein 21
Genome locationchr11:23426291..23427373
RNA-Seq ExpressionLsi11G014940
SyntenyLsi11G014940
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000782 - FAS1 domain
IPR036378 - FAS1 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031618.1 fasciclin-like arabinogalactan protein 21 [Cucumis melo var. makuwa]2.8e-18089.81Show/hide
Query:  MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHSATPPNKAMADELSLNASTALRRAGFNTIATLLQVFPEHFFSPQNSTIFAIKDSAISNISLPPW
        MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSH+ATPPNK+M DELSLNAS ALRRAGFNTIATLLQV PEHFF PQNSTIFAIKDSAISN SLPPW
Subjt:  MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHSATPPNKAMADELSLNASTALRRAGFNTIATLLQVFPEHFFSPQNSTIFAIKDSAISNISLPPW

Query:  LLKNLVQYHTSPSKLSMADLLKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLDASQGWSFIQAPFCDSN
        LLKNLV+YHTSP KLSM DLLKKPQG CL TLL PKKIAIT+MDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLD  QGWS IQ+P+CDSN
Subjt:  LLKNLVQYHTSPSKLSMADLLKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLDASQGWSFIQAPFCDSN

Query:  ATVISDPLETKN---GVEVEVEWRRIIRWLSANGFVSYAIGLQSVLEGILQDFEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPT
         T+ISDP ET N   GV VEVEWRRIIRWLSANGFVSYAIGLQ+VLEG+LQDF GLRSITVFAPPNL SV SPSPVLNRAVRLHIVPQMVTYKSLASLP 
Subjt:  ATVISDPLETKN---GVEVEVEWRRIIRWLSANGFVSYAIGLQSVLEGILQDFEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPT

Query:  RTSLKTLVSGQDLEILGGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPHSSR
        RTSLKTLVSGQD+EILGGVRVPRG VVVNGVEIVSPEIFRS NCVIHGISRSLEIAG+PHSSR
Subjt:  RTSLKTLVSGQDLEILGGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPHSSR

XP_004144575.2 fasciclin-like arabinogalactan protein 21 [Cucumis sativus]5.5e-18491.74Show/hide
Query:  MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHSATPPNKAMADELSLNASTALRRAGFNTIATLLQVFPEHFFSPQNSTIFAIKDSAISNISLPPW
        MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHS TPPNK+MAD+LSLNAS ALRRAGFNTIATLLQV PEHFFSPQNSTIFAIKDSAISN SLPPW
Subjt:  MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHSATPPNKAMADELSLNASTALRRAGFNTIATLLQVFPEHFFSPQNSTIFAIKDSAISNISLPPW

Query:  LLKNLVQYHTSPSKLSMADLLKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLDASQGWSFIQAPFCDSN
        LLKNLVQYHTSP KLSMADLLKKP+GVCL TLL PKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLD  QGWSFIQ+P+CD+N
Subjt:  LLKNLVQYHTSPSKLSMADLLKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLDASQGWSFIQAPFCDSN

Query:  ATVISDPLETKN---GVEVEVEWRRIIRWLSANGFVSYAIGLQSVLEGILQDFEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPT
        AT+ISDP ET N   GV VEVEWRRIIRWLSANGF+SYAIGLQ+VLEG+LQDFEGLRSITVFAPPNL+SVASPSPVLNRAVRLHIVPQMVTYKSLASLPT
Subjt:  ATVISDPLETKN---GVEVEVEWRRIIRWLSANGFVSYAIGLQSVLEGILQDFEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPT

Query:  RTSLKTLVSGQDLEILGGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPHSSR
        RTSLKTLVSGQD+EILGGVRVPRG V VNGVEIVSPEIFRS NCVIHGISRSLEIAGLPHSSR
Subjt:  RTSLKTLVSGQDLEILGGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPHSSR

XP_008455382.1 PREDICTED: fasciclin-like arabinogalactan protein 21 [Cucumis melo]2.8e-18090.08Show/hide
Query:  MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHSATPPNKAMADELSLNASTALRRAGFNTIATLLQVFPEHFFSPQNSTIFAIKDSAISNISLPPW
        MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSH+ATPPNK+MADELSLNAS ALRRAGFNTIATLLQV PEHFF PQNSTIFAIKDSAISN SLPPW
Subjt:  MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHSATPPNKAMADELSLNASTALRRAGFNTIATLLQVFPEHFFSPQNSTIFAIKDSAISNISLPPW

Query:  LLKNLVQYHTSPSKLSMADLLKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLDASQGWSFIQAPFCDSN
        LLKNLV+YHTSP KLSM DLLKKPQG CL TLL PKKIAIT+MDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLD  QGWS IQ+P+CDSN
Subjt:  LLKNLVQYHTSPSKLSMADLLKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLDASQGWSFIQAPFCDSN

Query:  ATVISDPLETKN---GVEVEVEWRRIIRWLSANGFVSYAIGLQSVLEGILQDFEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPT
         T+ISDP E  N   GV VEVEWRRIIRWLSANGFVSYAIGLQ+VLEG+LQDF GLRSITVFAPPNL SV SPSPVLNRAVRLHIVPQMVTYKSLASLP 
Subjt:  ATVISDPLETKN---GVEVEVEWRRIIRWLSANGFVSYAIGLQSVLEGILQDFEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPT

Query:  RTSLKTLVSGQDLEILGGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPHSSR
        RTSLKTLVSGQD+EILGGVRVPRG VVVNGVEIVSPEIFRS NCVIHGISRSLEIAGLPHSSR
Subjt:  RTSLKTLVSGQDLEILGGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPHSSR

XP_022952208.1 fasciclin-like arabinogalactan protein 21 [Cucurbita moschata]2.7e-17589.47Show/hide
Query:  MAKCSFEWWHAPIVFSISVVLAFFAISTALHS-STSHSATPPNKAMADELSLNASTALRRAGFNTIATLLQVFPEHFFSPQNSTIFAIKDSAISNISLPP
        M KCSFEWWHAPI F++SVVLAFFAISTAL+S +TSHSATPP KA+ADELS+NAS ALRRAGFNTIATLLQV PEHFFSPQNSTIFAIKDSAISN SLPP
Subjt:  MAKCSFEWWHAPIVFSISVVLAFFAISTALHS-STSHSATPPNKAMADELSLNASTALRRAGFNTIATLLQVFPEHFFSPQNSTIFAIKDSAISNISLPP

Query:  WLLKNLVQYHTSPSKLSMADLLKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLDASQGWSFIQAPFCDS
        WLLKNLVQYHTSPSKLSMADLLKKPQGVCL TLL PKKIAIT+MDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLD  QGWSFIQAPFCDS
Subjt:  WLLKNLVQYHTSPSKLSMADLLKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLDASQGWSFIQAPFCDS

Query:  NATVISDPLETKNGVEVEVEWRRIIRWLSANGFVSYAIGLQSVLEGILQDFEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPTRT
         AT+ISD LE K G  VEVEWRRIIRWLSANGFVSYAIGLQSVLEGILQDFEGLRSITVFAPPNLASVAS SPVL RAVRLHIVP+MVTYK LASLP RT
Subjt:  NATVISDPLETKNGVEVEVEWRRIIRWLSANGFVSYAIGLQSVLEGILQDFEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPTRT

Query:  SLKTLVSGQDLEILGGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPHSSR
        S KTLVSGQDL++LGGVRVPRG VVVNGVEIVSPEIFRS NCVIHGISRSLE A LPH SR
Subjt:  SLKTLVSGQDLEILGGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPHSSR

XP_038886823.1 fasciclin-like arabinogalactan protein 21 [Benincasa hispida]1.8e-18794.46Show/hide
Query:  MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHSATPPNKAMADELSLNASTALRRAGFNTIATLLQVFPEHFFSPQNSTIFAIKDSAISNISLPPW
        MAKCSFEWWHAPIVFSISVVLAFFAI+TALHS+TSHSATPPNKAMADELSLNAS ALRRAGFNTIATLLQV PEHFFSPQNSTIFAIKDSAISN SLPPW
Subjt:  MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHSATPPNKAMADELSLNASTALRRAGFNTIATLLQVFPEHFFSPQNSTIFAIKDSAISNISLPPW

Query:  LLKNLVQYHTSPSKLSMADLLKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLDASQGWSFIQAPFCDSN
        LLKNLVQYHTSPSKLSMADLLKKPQGVCL TLL PKKIAIT+M+STARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLD  QGWSFIQAPFCDSN
Subjt:  LLKNLVQYHTSPSKLSMADLLKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLDASQGWSFIQAPFCDSN

Query:  ATVISDPLETKNG-VEVEVEWRRIIRWLSANGFVSYAIGLQSVLEGILQDFEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPTRT
        ATVISDPLETKNG V VEVEWRRIIRWLSANGFVSYAIGLQSVLEGILQ+FEGL+SITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLP +T
Subjt:  ATVISDPLETKNG-VEVEVEWRRIIRWLSANGFVSYAIGLQSVLEGILQDFEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPTRT

Query:  SLKTLVSGQDLEILGGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPHSSR
        SLKTLVSGQDLEILGGVRVPRG VVVNGVEIVSPEIFRS NCVIHGISRSLEI GLPHSSR
Subjt:  SLKTLVSGQDLEILGGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPHSSR

TrEMBL top hitse value%identityAlignment
A0A0A0K1P3 FAS1 domain-containing protein2.7e-18491.74Show/hide
Query:  MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHSATPPNKAMADELSLNASTALRRAGFNTIATLLQVFPEHFFSPQNSTIFAIKDSAISNISLPPW
        MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHS TPPNK+MAD+LSLNAS ALRRAGFNTIATLLQV PEHFFSPQNSTIFAIKDSAISN SLPPW
Subjt:  MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHSATPPNKAMADELSLNASTALRRAGFNTIATLLQVFPEHFFSPQNSTIFAIKDSAISNISLPPW

Query:  LLKNLVQYHTSPSKLSMADLLKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLDASQGWSFIQAPFCDSN
        LLKNLVQYHTSP KLSMADLLKKP+GVCL TLL PKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLD  QGWSFIQ+P+CD+N
Subjt:  LLKNLVQYHTSPSKLSMADLLKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLDASQGWSFIQAPFCDSN

Query:  ATVISDPLETKN---GVEVEVEWRRIIRWLSANGFVSYAIGLQSVLEGILQDFEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPT
        AT+ISDP ET N   GV VEVEWRRIIRWLSANGF+SYAIGLQ+VLEG+LQDFEGLRSITVFAPPNL+SVASPSPVLNRAVRLHIVPQMVTYKSLASLPT
Subjt:  ATVISDPLETKN---GVEVEVEWRRIIRWLSANGFVSYAIGLQSVLEGILQDFEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPT

Query:  RTSLKTLVSGQDLEILGGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPHSSR
        RTSLKTLVSGQD+EILGGVRVPRG V VNGVEIVSPEIFRS NCVIHGISRSLEIAGLPHSSR
Subjt:  RTSLKTLVSGQDLEILGGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPHSSR

A0A1S3C0C6 fasciclin-like arabinogalactan protein 211.4e-18090.08Show/hide
Query:  MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHSATPPNKAMADELSLNASTALRRAGFNTIATLLQVFPEHFFSPQNSTIFAIKDSAISNISLPPW
        MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSH+ATPPNK+MADELSLNAS ALRRAGFNTIATLLQV PEHFF PQNSTIFAIKDSAISN SLPPW
Subjt:  MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHSATPPNKAMADELSLNASTALRRAGFNTIATLLQVFPEHFFSPQNSTIFAIKDSAISNISLPPW

Query:  LLKNLVQYHTSPSKLSMADLLKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLDASQGWSFIQAPFCDSN
        LLKNLV+YHTSP KLSM DLLKKPQG CL TLL PKKIAIT+MDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLD  QGWS IQ+P+CDSN
Subjt:  LLKNLVQYHTSPSKLSMADLLKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLDASQGWSFIQAPFCDSN

Query:  ATVISDPLETKN---GVEVEVEWRRIIRWLSANGFVSYAIGLQSVLEGILQDFEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPT
         T+ISDP E  N   GV VEVEWRRIIRWLSANGFVSYAIGLQ+VLEG+LQDF GLRSITVFAPPNL SV SPSPVLNRAVRLHIVPQMVTYKSLASLP 
Subjt:  ATVISDPLETKN---GVEVEVEWRRIIRWLSANGFVSYAIGLQSVLEGILQDFEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPT

Query:  RTSLKTLVSGQDLEILGGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPHSSR
        RTSLKTLVSGQD+EILGGVRVPRG VVVNGVEIVSPEIFRS NCVIHGISRSLEIAGLPHSSR
Subjt:  RTSLKTLVSGQDLEILGGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPHSSR

A0A5A7SLY0 Fasciclin-like arabinogalactan protein 211.4e-18089.81Show/hide
Query:  MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHSATPPNKAMADELSLNASTALRRAGFNTIATLLQVFPEHFFSPQNSTIFAIKDSAISNISLPPW
        MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSH+ATPPNK+M DELSLNAS ALRRAGFNTIATLLQV PEHFF PQNSTIFAIKDSAISN SLPPW
Subjt:  MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHSATPPNKAMADELSLNASTALRRAGFNTIATLLQVFPEHFFSPQNSTIFAIKDSAISNISLPPW

Query:  LLKNLVQYHTSPSKLSMADLLKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLDASQGWSFIQAPFCDSN
        LLKNLV+YHTSP KLSM DLLKKPQG CL TLL PKKIAIT+MDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLD  QGWS IQ+P+CDSN
Subjt:  LLKNLVQYHTSPSKLSMADLLKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLDASQGWSFIQAPFCDSN

Query:  ATVISDPLETKN---GVEVEVEWRRIIRWLSANGFVSYAIGLQSVLEGILQDFEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPT
         T+ISDP ET N   GV VEVEWRRIIRWLSANGFVSYAIGLQ+VLEG+LQDF GLRSITVFAPPNL SV SPSPVLNRAVRLHIVPQMVTYKSLASLP 
Subjt:  ATVISDPLETKN---GVEVEVEWRRIIRWLSANGFVSYAIGLQSVLEGILQDFEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPT

Query:  RTSLKTLVSGQDLEILGGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPHSSR
        RTSLKTLVSGQD+EILGGVRVPRG VVVNGVEIVSPEIFRS NCVIHGISRSLEIAG+PHSSR
Subjt:  RTSLKTLVSGQDLEILGGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPHSSR

A0A6J1GJX5 fasciclin-like arabinogalactan protein 211.3e-17589.47Show/hide
Query:  MAKCSFEWWHAPIVFSISVVLAFFAISTALHS-STSHSATPPNKAMADELSLNASTALRRAGFNTIATLLQVFPEHFFSPQNSTIFAIKDSAISNISLPP
        M KCSFEWWHAPI F++SVVLAFFAISTAL+S +TSHSATPP KA+ADELS+NAS ALRRAGFNTIATLLQV PEHFFSPQNSTIFAIKDSAISN SLPP
Subjt:  MAKCSFEWWHAPIVFSISVVLAFFAISTALHS-STSHSATPPNKAMADELSLNASTALRRAGFNTIATLLQVFPEHFFSPQNSTIFAIKDSAISNISLPP

Query:  WLLKNLVQYHTSPSKLSMADLLKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLDASQGWSFIQAPFCDS
        WLLKNLVQYHTSPSKLSMADLLKKPQGVCL TLL PKKIAIT+MDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLD  QGWSFIQAPFCDS
Subjt:  WLLKNLVQYHTSPSKLSMADLLKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLDASQGWSFIQAPFCDS

Query:  NATVISDPLETKNGVEVEVEWRRIIRWLSANGFVSYAIGLQSVLEGILQDFEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPTRT
         AT+ISD LE K G  VEVEWRRIIRWLSANGFVSYAIGLQSVLEGILQDFEGLRSITVFAPPNLASVAS SPVL RAVRLHIVP+MVTYK LASLP RT
Subjt:  NATVISDPLETKNGVEVEVEWRRIIRWLSANGFVSYAIGLQSVLEGILQDFEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPTRT

Query:  SLKTLVSGQDLEILGGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPHSSR
        S KTLVSGQDL++LGGVRVPRG VVVNGVEIVSPEIFRS NCVIHGISRSLE A LPH SR
Subjt:  SLKTLVSGQDLEILGGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPHSSR

A0A6J1I056 fasciclin-like arabinogalactan protein 211.3e-17589.47Show/hide
Query:  MAKCSFEWWHAPIVFSISVVLAFFAISTALHS-STSHSATPPNKAMADELSLNASTALRRAGFNTIATLLQVFPEHFFSPQNSTIFAIKDSAISNISLPP
        M KCSFEWWHAPI F++SVVLAFFAISTAL+S +TSHSATPP KA+ADELS+NAS ALRRAGFNTIATLLQV PEHFFSPQNSTIFAIKDSAISN SLPP
Subjt:  MAKCSFEWWHAPIVFSISVVLAFFAISTALHS-STSHSATPPNKAMADELSLNASTALRRAGFNTIATLLQVFPEHFFSPQNSTIFAIKDSAISNISLPP

Query:  WLLKNLVQYHTSPSKLSMADLLKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLDASQGWSFIQAPFCDS
        WLLKNLVQYHTSPSKLSMADLLKKPQGVCL TLL PKKIAIT+MDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLD  QGWSFIQAPFCDS
Subjt:  WLLKNLVQYHTSPSKLSMADLLKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLDASQGWSFIQAPFCDS

Query:  NATVISDPLETKNGVEVEVEWRRIIRWLSANGFVSYAIGLQSVLEGILQDFEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPTRT
         AT+ISD LE K G  VEVEWRRIIRWLSANGFVSYAIGLQSVLEGILQDFEGLRSITVFAPPNLASVAS SPVL RAVRLHIVP+MVTYK LASLP RT
Subjt:  NATVISDPLETKNGVEVEVEWRRIIRWLSANGFVSYAIGLQSVLEGILQDFEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPTRT

Query:  SLKTLVSGQDLEILGGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPHSSR
        S KTLVSGQDL++LGGVRVPRG VVVNGVEIVSPEIFRS NCVIHGISRSLE A LPH SR
Subjt:  SLKTLVSGQDLEILGGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPHSSR

SwissProt top hitse value%identityAlignment
Q9FL53 Fasciclin-like arabinogalactan protein 212.9e-7146.18Show/hide
Query:  IVFSISVVLAFFAISTALHSSTSHSATPP--NKAMADELSLNASTALRRAGFNTIATLLQVFPEHFFSPQ-NSTIFAIKDSAISNI-SLPPWLLKNLVQY
        + F +S+ LAF AIST L S      T P    + +  LSLNAS  LR++ F  IATLL + PE F S   N+T+FAI+D++  N  SL P  LK L+ Y
Subjt:  IVFSISVVLAFFAISTALHSSTSHSATPP--NKAMADELSLNASTALRRAGFNTIATLLQVFPEHFFSPQ-NSTIFAIKDSAISNI-SLPPWLLKNLVQY

Query:  HTSPSKLSMADLLKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLDASQGWSFIQAPFCDSNATVISDPL
        HT P  LSM DLLKKPQG CL TLL  K + I+ ++  +R  E+NHV +T PD+FLG ++ IHGV+GPFSPL P         I  P C S+ T   +  
Subjt:  HTSPSKLSMADLLKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLDASQGWSFIQAPFCDSNATVISDPL

Query:  ETKNGVEVEVEWRRIIRWLSANGFVSYAIGLQSVLEGILQD---FEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPTRTSLKTLV
             V V ++W RI++ LS+NGFV +AIGL SVL  I+ D    + L  +T+ A PNL S++S SP L   VR HI+ Q +TYK  AS+  + ++KTL 
Subjt:  ETKNGVEVEVEWRRIIRWLSANGFVSYAIGLQSVLEGILQD---FEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPTRTSLKTLV

Query:  SGQDLEIL-GGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPH
          QDL I    V    G  +++GVEIV P++F S+N VIHGIS +LEI   PH
Subjt:  SGQDLEIL-GGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPH

Arabidopsis top hitse value%identityAlignment
AT1G30800.1 Fasciclin-like arabinogalactan family protein2.4e-0433.33Show/hide
Query:  ATLLQVFPEHFFSPQNSTIFAIKD-----------SAISNISLPPWLLKNLVQYHTSPSKLSMADL-LKKPQGVCLSTLLTPKKIAITKMDSTARLVEIN
        A  L    + F  P ++TIF   D           S   N +  P  L   V YH  P +LS  DL L KP    L TLL    I +T  +++     ++
Subjt:  ATLLQVFPEHFFSPQNSTIFAIKD-----------SAISNISLPPWLLKNLVQYHTSPSKLSMADL-LKKPQGVCLSTLLTPKKIAITKMDSTARLVEIN

Query:  HVLVTDPDIFLGGNVSIHGV
         VLV++PD+FL  +++IHGV
Subjt:  HVLVTDPDIFLGGNVSIHGV

AT5G06920.1 FASCICLIN-like arabinogalactan protein 21 precursor2.1e-7246.18Show/hide
Query:  IVFSISVVLAFFAISTALHSSTSHSATPP--NKAMADELSLNASTALRRAGFNTIATLLQVFPEHFFSPQ-NSTIFAIKDSAISNI-SLPPWLLKNLVQY
        + F +S+ LAF AIST L S      T P    + +  LSLNAS  LR++ F  IATLL + PE F S   N+T+FAI+D++  N  SL P  LK L+ Y
Subjt:  IVFSISVVLAFFAISTALHSSTSHSATPP--NKAMADELSLNASTALRRAGFNTIATLLQVFPEHFFSPQ-NSTIFAIKDSAISNI-SLPPWLLKNLVQY

Query:  HTSPSKLSMADLLKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLDASQGWSFIQAPFCDSNATVISDPL
        HT P  LSM DLLKKPQG CL TLL  K + I+ ++  +R  E+NHV +T PD+FLG ++ IHGV+GPFSPL P         I  P C S+ T   +  
Subjt:  HTSPSKLSMADLLKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLDASQGWSFIQAPFCDSNATVISDPL

Query:  ETKNGVEVEVEWRRIIRWLSANGFVSYAIGLQSVLEGILQD---FEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPTRTSLKTLV
             V V ++W RI++ LS+NGFV +AIGL SVL  I+ D    + L  +T+ A PNL S++S SP L   VR HI+ Q +TYK  AS+  + ++KTL 
Subjt:  ETKNGVEVEVEWRRIIRWLSANGFVSYAIGLQSVLEGILQD---FEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPTRTSLKTLV

Query:  SGQDLEIL-GGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPH
          QDL I    V    G  +++GVEIV P++F S+N VIHGIS +LEI   PH
Subjt:  SGQDLEIL-GGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAGTGTTCATTCGAATGGTGGCATGCACCCATCGTCTTCTCCATCTCTGTAGTTTTAGCCTTCTTCGCCATCTCCACAGCTCTGCATTCCTCTACTTCCCACTC
TGCAACTCCACCCAACAAAGCCATGGCCGACGAACTCTCTTTAAACGCATCAACAGCCTTAAGAAGAGCCGGTTTCAACACCATTGCCACACTCCTTCAGGTCTTCCCTG
AACATTTCTTCTCCCCTCAAAACTCCACCATCTTCGCCATTAAAGATTCCGCCATCTCCAATATCTCCCTCCCTCCATGGCTCCTCAAGAATCTTGTCCAATACCACACT
TCCCCTTCCAAGCTTTCCATGGCTGACCTGTTAAAGAAGCCTCAAGGGGTCTGTCTCTCGACCCTTTTGACGCCAAAGAAAATTGCTATCACTAAAATGGATTCCACTGC
CAGATTGGTTGAGATCAATCATGTTCTTGTCACTGACCCTGATATTTTTCTTGGTGGGAATGTTTCCATTCATGGAGTTCTTGGGCCATTTTCTCCTCTGGATCCTCTTG
ATGCTAGTCAGGGATGGAGTTTCATTCAAGCGCCGTTCTGCGATTCAAACGCCACTGTAATTTCAGATCCTCTTGAAACCAAGAATGGGGTTGAGGTTGAAGTCGAATGG
AGAAGAATCATACGGTGGCTTAGTGCAAATGGGTTTGTTTCTTATGCAATCGGATTGCAATCCGTTCTCGAAGGGATTCTTCAAGATTTCGAAGGATTGAGATCGATTAC
CGTCTTTGCGCCGCCGAATTTGGCTTCTGTAGCATCTCCATCGCCTGTTCTGAATCGAGCTGTGAGGCTTCATATTGTTCCTCAAATGGTTACATACAAATCCCTAGCTT
CGTTGCCGACCAGAACTTCGCTCAAGACGCTCGTCTCCGGCCAAGATCTCGAGATCCTCGGAGGAGTTCGAGTTCCGAGAGGAATGGTGGTCGTTAACGGCGTGGAGATT
GTCTCACCAGAGATCTTCCGATCTGCGAACTGTGTAATCCATGGAATTTCCCGGTCGCTTGAGATCGCCGGTTTACCTCATTCATCAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAGTGTTCATTCGAATGGTGGCATGCACCCATCGTCTTCTCCATCTCTGTAGTTTTAGCCTTCTTCGCCATCTCCACAGCTCTGCATTCCTCTACTTCCCACTC
TGCAACTCCACCCAACAAAGCCATGGCCGACGAACTCTCTTTAAACGCATCAACAGCCTTAAGAAGAGCCGGTTTCAACACCATTGCCACACTCCTTCAGGTCTTCCCTG
AACATTTCTTCTCCCCTCAAAACTCCACCATCTTCGCCATTAAAGATTCCGCCATCTCCAATATCTCCCTCCCTCCATGGCTCCTCAAGAATCTTGTCCAATACCACACT
TCCCCTTCCAAGCTTTCCATGGCTGACCTGTTAAAGAAGCCTCAAGGGGTCTGTCTCTCGACCCTTTTGACGCCAAAGAAAATTGCTATCACTAAAATGGATTCCACTGC
CAGATTGGTTGAGATCAATCATGTTCTTGTCACTGACCCTGATATTTTTCTTGGTGGGAATGTTTCCATTCATGGAGTTCTTGGGCCATTTTCTCCTCTGGATCCTCTTG
ATGCTAGTCAGGGATGGAGTTTCATTCAAGCGCCGTTCTGCGATTCAAACGCCACTGTAATTTCAGATCCTCTTGAAACCAAGAATGGGGTTGAGGTTGAAGTCGAATGG
AGAAGAATCATACGGTGGCTTAGTGCAAATGGGTTTGTTTCTTATGCAATCGGATTGCAATCCGTTCTCGAAGGGATTCTTCAAGATTTCGAAGGATTGAGATCGATTAC
CGTCTTTGCGCCGCCGAATTTGGCTTCTGTAGCATCTCCATCGCCTGTTCTGAATCGAGCTGTGAGGCTTCATATTGTTCCTCAAATGGTTACATACAAATCCCTAGCTT
CGTTGCCGACCAGAACTTCGCTCAAGACGCTCGTCTCCGGCCAAGATCTCGAGATCCTCGGAGGAGTTCGAGTTCCGAGAGGAATGGTGGTCGTTAACGGCGTGGAGATT
GTCTCACCAGAGATCTTCCGATCTGCGAACTGTGTAATCCATGGAATTTCCCGGTCGCTTGAGATCGCCGGTTTACCTCATTCATCAAGATGA
Protein sequenceShow/hide protein sequence
MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHSATPPNKAMADELSLNASTALRRAGFNTIATLLQVFPEHFFSPQNSTIFAIKDSAISNISLPPWLLKNLVQYHT
SPSKLSMADLLKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLDASQGWSFIQAPFCDSNATVISDPLETKNGVEVEVEW
RRIIRWLSANGFVSYAIGLQSVLEGILQDFEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPTRTSLKTLVSGQDLEILGGVRVPRGMVVVNGVEI
VSPEIFRSANCVIHGISRSLEIAGLPHSSR