CuGenDBv2

Gene ID	Lsi11G015170
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Wound-responsive family protein
Genome location	chr11:23585377..23585655
RNA-Seq Expression	Lsi11G015170
Synteny	Lsi11G015170
Gene Ontology terms	NA
InterPro domains	IPR022251 - Protein of unknown function wound-induced

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0031600.1 wound-responsive family protein [Cucumis melo var. makuwa]

1.7e-41

95.65

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Query:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGVVRSCDVDERMAQTEDSLRRVMYLNCWGQG
        MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG G VRSCDVDER+AQ+EDSLRRVMYLNCWGQG
Subjt:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGVVRSCDVDERMAQTEDSLRRVMYLNCWGQG

KAE8645762.1 hypothetical protein Csa_020269 [Cucumis sativus]

1.7e-41

95.65

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Query:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGVVRSCDVDERMAQTEDSLRRVMYLNCWGQG
        MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG G VRSCDVDER+AQ+EDSLRRVMYLNCWGQG
Subjt:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGVVRSCDVDERMAQTEDSLRRVMYLNCWGQG

KAG6572339.1 hypothetical protein SDJN03_29067, partial [Cucurbita argyrosperma subsp. sororia]

5.1e-41

94.57

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Query:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGVVRSCDVDERMAQTEDSLRRVMYLNCWGQG
        MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGEN ADLRPLSSLVGSEGPG VR+ D DERMAQTEDSLRRVMYLNCWGQG
Subjt:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGVVRSCDVDERMAQTEDSLRRVMYLNCWGQG

KAG6589197.1 hypothetical protein SDJN03_17762, partial [Cucurbita argyrosperma subsp. sororia]

9.9e-37

86.96

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Query:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGVVRSCDVDERMAQTEDSLRRVMYLNCWGQG
        MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKS RQGR+LLSSGEN ADLRPLSSLVGSEGP  V+S D  ER+AQ+E+SLRRVMYLNCWGQG
Subjt:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGVVRSCDVDERMAQTEDSLRRVMYLNCWGQG

KAG7011951.1 hypothetical protein SDJN02_26859, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.3e-41

95.65

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Query:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGVVRSCDVDERMAQTEDSLRRVMYLNCWGQG
        MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGEN ADLRPLSSLVGSEGPG VRS D DERMAQTEDSLRRVMYLNCWGQG
Subjt:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGVVRSCDVDERMAQTEDSLRRVMYLNCWGQG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K6Z3 Uncharacterized protein

8.4e-42

95.65

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Query:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGVVRSCDVDERMAQTEDSLRRVMYLNCWGQG
        MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG G VRSCDVDER+AQ+EDSLRRVMYLNCWGQG
Subjt:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGVVRSCDVDERMAQTEDSLRRVMYLNCWGQG

A0A2N9HZV9 Uncharacterized protein

3.0e-23

59.78

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Query:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGVVRSCDVDERMAQTEDSLRRVMYLNCWGQG
        MSYLNRV MAA VAV QG T+ GHKWKSG+KS++  ++ L SG +++DLRPLS ++GS+  G + + D DER    ++SLRRVMYLNCWGQG
Subjt:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGVVRSCDVDERMAQTEDSLRRVMYLNCWGQG

A0A5A7SLJ2 Wound-responsive family protein

8.4e-42

95.65

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Query:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGVVRSCDVDERMAQTEDSLRRVMYLNCWGQG
        MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG G VRSCDVDER+AQ+EDSLRRVMYLNCWGQG
Subjt:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGVVRSCDVDERMAQTEDSLRRVMYLNCWGQG

A0A5N6RB28 Uncharacterized protein

4.6e-24

64.13

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Query:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGVVRSCDVDERMAQTEDSLRRVMYLNCWGQG
        MSYLNR+ MAASVAV QGHT+ G K K GLKSL+ G+R   SG +SADLRP+S ++G +  G + S D DER  Q E+SLRRVMYLNCWGQG
Subjt:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGVVRSCDVDERMAQTEDSLRRVMYLNCWGQG

A0A6A1VB48 Uncharacterized protein

2.5e-22

60.87

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Query:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGVVRSCDVDERMAQTEDSLRRVMYLNCWGQG
        MSY+NRV MAASVAV QGH + G K KSG+ SL+ GRR   SG +S+D+RPLS ++GS+  G + + D DER  Q ++SLRRVMYLNCWGQG
Subjt:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGVVRSCDVDERMAQTEDSLRRVMYLNCWGQG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G28240.1 Wound-responsive family protein

4.0e-12

46.81

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Query:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSS--LVGSEGPGVVRSCDVDERMAQTEDSLRRVMYLNCWGQG
        MSYLN+V MAAS    QG+ + G K KSGL S  + +R LSS     DLRPL++  L G   P   R        +  ++SLR+VMYLNCW QG
Subjt:  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSS--LVGSEGPGVVRSCDVDERMAQTEDSLRRVMYLNCWGQG

Sequences

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CDS sequence

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ATGAGTTACCTGAACAGAGTTGGAATGGCGGCGAGCGTGGCGGTGGCTCAAGGACACACGGAGATCGGACACAAGTGGAAATCTGGACTCAAATCTCTTCGACAAGGTCG
GAGGCTTTTGTCTTCCGGTGAAAATTCGGCGGATCTCCGCCCACTTTCCAGTTTGGTTGGATCGGAAGGTCCTGGAGTTGTCCGGAGCTGTGACGTTGATGAGAGGATGG
CGCAAACGGAGGATTCTCTCCGGAGAGTAATGTACTTGAACTGTTGGGGCCAAGGGTGA

mRNA sequence

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Protein sequence

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MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGPGVVRSCDVDERMAQTEDSLRRVMYLNCWGQG

Lsi11G015170 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome