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Lsi11G015380 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G015380
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein of unknown function (DUF789)
Genome locationchr11:23712573..23712836
RNA-Seq ExpressionLsi11G015380
SyntenyLsi11G015380
Gene Ontology termsNA
InterPro domainsIPR008507 - Protein of unknown function DUF789


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572354.1 hypothetical protein SDJN03_29082, partial [Cucurbita argyrosperma subsp. sororia]3.6e-2880.72Show/hide
Query:  DMEMDEEEGGGTKRCRRREEREGISVSAFGVVTYKMQGNLWVAGNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYFTGLRRG
        D+EM+EE  G  KR  RRE  EGI+V+AFGV TYKMQG+LWVAGNGGRDQERLV+LSSVAESWLKQLRVQHHDFNYFTGLR G
Subjt:  DMEMDEEEGGGTKRCRRREEREGISVSAFGVVTYKMQGNLWVAGNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYFTGLRRG

XP_008455334.1 PREDICTED: uncharacterized protein LOC103495524 [Cucumis melo]6.9e-3287.95Show/hide
Query:  DMEMDEEEGGGTKRCRRREEREGISVSAFGVVTYKMQGNLWVAGNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYFTGLRRG
        DM+M EEEGGGTKR  RRE  EGI V+AFGV TYKMQGNLWVAGNGGRDQERL+SLSSVAESWLKQLRVQHHDFNYFTGLRRG
Subjt:  DMEMDEEEGGGTKRCRRREEREGISVSAFGVVTYKMQGNLWVAGNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYFTGLRRG

XP_011658743.1 uncharacterized protein LOC101214941 [Cucumis sativus]8.2e-3389.16Show/hide
Query:  DMEMDEEEGGGTKRCRRREEREGISVSAFGVVTYKMQGNLWVAGNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYFTGLRRG
        DM+M EE GGGTKR +RRE REGI V+AFGV TYKMQGNLWVAGNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYFTGLRRG
Subjt:  DMEMDEEEGGGTKRCRRREEREGISVSAFGVVTYKMQGNLWVAGNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYFTGLRRG

XP_023554553.1 uncharacterized protein LOC111811759 isoform X1 [Cucurbita pepo subsp. pepo]3.6e-2880.72Show/hide
Query:  DMEMDEEEGGGTKRCRRREEREGISVSAFGVVTYKMQGNLWVAGNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYFTGLRRG
        D+EM+EE  G  KR  RRE  EGI+V+AFGV TYKMQG+LWVAGNGGRDQERLV+LSSVAESWLKQLRVQHHDFNYFTGLR G
Subjt:  DMEMDEEEGGGTKRCRRREEREGISVSAFGVVTYKMQGNLWVAGNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYFTGLRRG

XP_038886925.1 uncharacterized protein LOC120077111 [Benincasa hispida]6.3e-3389.29Show/hide
Query:  DMEMDEEE-GGGTKRCRRREEREGISVSAFGVVTYKMQGNLWVAGNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYFTGLRRG
        DMEM+EEE GGG KR +RRE  EGISV+AFGVVTYKMQG+LWVAGNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYFTGLRRG
Subjt:  DMEMDEEE-GGGTKRCRRREEREGISVSAFGVVTYKMQGNLWVAGNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYFTGLRRG

TrEMBL top hitse value%identityAlignment
A0A0A0K709 Uncharacterized protein4.0e-3389.16Show/hide
Query:  DMEMDEEEGGGTKRCRRREEREGISVSAFGVVTYKMQGNLWVAGNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYFTGLRRG
        DM+M EE GGGTKR +RRE REGI V+AFGV TYKMQGNLWVAGNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYFTGLRRG
Subjt:  DMEMDEEEGGGTKRCRRREEREGISVSAFGVVTYKMQGNLWVAGNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYFTGLRRG

A0A1S3C1E3 uncharacterized protein LOC1034955243.3e-3287.95Show/hide
Query:  DMEMDEEEGGGTKRCRRREEREGISVSAFGVVTYKMQGNLWVAGNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYFTGLRRG
        DM+M EEEGGGTKR  RRE  EGI V+AFGV TYKMQGNLWVAGNGGRDQERL+SLSSVAESWLKQLRVQHHDFNYFTGLRRG
Subjt:  DMEMDEEEGGGTKRCRRREEREGISVSAFGVVTYKMQGNLWVAGNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYFTGLRRG

A0A6J1D162 uncharacterized protein LOC1110166572.9e-2877.91Show/hide
Query:  DMEMDEE---EGGGTKRCRRREEREGISVSAFGVVTYKMQGNLWVAGNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYFTGLRRG
        DME +EE   E GG  R R+RE  EGISV+AFGV TYKMQG+LWVAGNGGRD ERLV+LSSVAESWLKQLRVQHHDFNYF GL RG
Subjt:  DMEMDEE---EGGGTKRCRRREEREGISVSAFGVVTYKMQGNLWVAGNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYFTGLRRG

A0A6J1GJG5 uncharacterized protein LOC111454841 isoform X15.0e-2879.52Show/hide
Query:  DMEMDEEEGGGTKRCRRREEREGISVSAFGVVTYKMQGNLWVAGNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYFTGLRRG
        D+EM+EE  G  KR  +RE  EGI+V+AFGV TYKMQG+LWVAGNGGRDQERLV+LSSVAESWLKQLRVQHHDFNYFTGLR G
Subjt:  DMEMDEEEGGGTKRCRRREEREGISVSAFGVVTYKMQGNLWVAGNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYFTGLRRG

A0A6J1HZ89 uncharacterized protein LOC111468258 isoform X11.5e-2777.11Show/hide
Query:  DMEMDEEEGGGTKRCRRREEREGISVSAFGVVTYKMQGNLWVAGNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYFTGLRRG
        D+EM+EE   G  + +RRE  EGI+V+AFGV TYKMQG+LWV+GNGGRDQERLV+LSSVAESWLKQLRVQHHDFNYFTGLR G
Subjt:  DMEMDEEEGGGTKRCRRREEREGISVSAFGVVTYKMQGNLWVAGNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYFTGLRRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G03610.1 Protein of unknown function (DUF789)7.2e-1958.97Show/hide
Query:  EMDEEEGGGTKRCRRREEREGISVSAFGVVTYKMQGNLWVAGNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYFTGL
        +M+ EE GG K  R R E E I++  FG+ TYKMQG++W++ +   DQERL SL SVA+SWLKQLRVQHHDFNYF  +
Subjt:  EMDEEEGGGTKRCRRREEREGISVSAFGVVTYKMQGNLWVAGNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYFTGL

AT1G73210.1 Protein of unknown function (DUF789)4.5e-1348.05Show/hide
Query:  DMEMDEEEGGGTKRCRRREEREGISVSAFGVVTYKMQGNLWVAGNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYF
        D   + EE   T+ C      + + +  FGV TYKMQG+LW  G  G DQ+RL+ L S A+SWLKQL V HHD+N+F
Subjt:  DMEMDEEEGGGTKRCRRREEREGISVSAFGVVTYKMQGNLWVAGNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYF

AT4G03420.1 Protein of unknown function (DUF789)4.5e-2161.04Show/hide
Query:  EMDEEEGGGTKRCRRREEREGISVSAFGVVTYKMQGNLWVA-GNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYFT
        +M+ EE GG K  R R+E EG+++  FG+ TYKMQGN+W++  + G+DQER++SL SVA+SWLKQLRVQHHDFNYF+
Subjt:  EMDEEEGGGTKRCRRREEREGISVSAFGVVTYKMQGNLWVA-GNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYFT

AT4G28150.1 Protein of unknown function (DUF789)8.8e-1763.49Show/hide
Query:  RRREEREGISVSAFGVVTYKMQGNLWVAGNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYFT
        +R EE+E ISVSAFG+ TYKMQG LW       D +RL+   SVA+SWLKQLRV HHDF YFT
Subjt:  RRREEREGISVSAFGVVTYKMQGNLWVAGNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYFT

AT4G28150.2 Protein of unknown function (DUF789)8.8e-1763.49Show/hide
Query:  RRREEREGISVSAFGVVTYKMQGNLWVAGNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYFT
        +R EE+E ISVSAFG+ TYKMQG LW       D +RL+   SVA+SWLKQLRV HHDF YFT
Subjt:  RRREEREGISVSAFGVVTYKMQGNLWVAGNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYFT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGTGGTAGATATGGAGATGGACGAGGAGGAGGGGGGAGGAACGAAGAGGTGTCGGAGGAGGGAAGAAAGGGAAGGGATATCGGTGTCAGCATTTGGGGTGGTGAC
GTACAAGATGCAGGGGAACCTATGGGTGGCGGGCAACGGCGGTCGGGACCAAGAGAGGCTGGTATCGCTGTCGAGCGTGGCGGAGTCATGGCTAAAGCAGCTGAGGGTCC
AACACCATGACTTCAACTACTTTACAGGCCTTCGCCGTGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTATGTGGTAGATATGGAGATGGACGAGGAGGAGGGGGGAGGAACGAAGAGGTGTCGGAGGAGGGAAGAAAGGGAAGGGATATCGGTGTCAGCATTTGGGGTGGTGAC
GTACAAGATGCAGGGGAACCTATGGGTGGCGGGCAACGGCGGTCGGGACCAAGAGAGGCTGGTATCGCTGTCGAGCGTGGCGGAGTCATGGCTAAAGCAGCTGAGGGTCC
AACACCATGACTTCAACTACTTTACAGGCCTTCGCCGTGGCTAA
Protein sequenceShow/hide protein sequence
MYVVDMEMDEEEGGGTKRCRRREEREGISVSAFGVVTYKMQGNLWVAGNGGRDQERLVSLSSVAESWLKQLRVQHHDFNYFTGLRRG