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Lsi11G015460 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G015460
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationchr11:23788105..23805530
RNA-Seq ExpressionLsi11G015460
SyntenyLsi11G015460
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038691760.1 E3 ubiquitin-protein ligase DIS1-like [Tripterygium wilfordii]9.8e-0484.38Show/hide
Query:  NSFDGLIIQRNMAFFFSYGDRKELKLRVGKRI
        +SFDGLIIQRNMA FFS GDRKELKLRV  RI
Subjt:  NSFDGLIIQRNMAFFFSYGDRKELKLRVGKRI

TrEMBL top hitse value%identityAlignment
A0A1U8J7G7 RING-type E3 ubiquitin transferase8.1e-0484.38Show/hide
Query:  NSFDGLIIQRNMAFFFSYGDRKELKLRVGKRI
        +SFDGLIIQRNMA FFS GDRKELKLRV  RI
Subjt:  NSFDGLIIQRNMAFFFSYGDRKELKLRVGKRI

A0A1U8MA80 RING-type E3 ubiquitin transferase4.7e-0481.82Show/hide
Query:  NSFDGLIIQRNMAFFFSYGDRKELKLRVGKRIK
        +SFDGLIIQRNMA FFS GDRKELKLRV  RI+
Subjt:  NSFDGLIIQRNMAFFFSYGDRKELKLRVGKRIK

A0A498I7C9 RING-type E3 ubiquitin transferase6.2e-0475.68Show/hide
Query:  NSFDGLIIQRNMAFFFSYGDRKELKLRVGKRIKYDFS
        NS DGLIIQRNMA FFS GDRKELKLR+  RI  D S
Subjt:  NSFDGLIIQRNMAFFFSYGDRKELKLRVGKRIKYDFS

A0A5D2GNG9 RING-type E3 ubiquitin transferase8.1e-0484.38Show/hide
Query:  NSFDGLIIQRNMAFFFSYGDRKELKLRVGKRI
        +SFDGLIIQRNMA FFS GDRKELKLRV  RI
Subjt:  NSFDGLIIQRNMAFFFSYGDRKELKLRVGKRI

A0A7J7C5U6 RING-type E3 ubiquitin transferase4.7e-0484.38Show/hide
Query:  NSFDGLIIQRNMAFFFSYGDRKELKLRVGKRI
        +SFDGLIIQRNMA FFS GDRKELKLRV  RI
Subjt:  NSFDGLIIQRNMAFFFSYGDRKELKLRVGKRI

SwissProt top hitse value%identityAlignment
Q10L91 E3 ubiquitin-protein ligase DIS11.4e-0578.12Show/hide
Query:  NSFDGLIIQRNMAFFFSYGDRKELKLRVGKRI
        +S+DGLIIQRNMA FFS G+RKELKLRV  RI
Subjt:  NSFDGLIIQRNMAFFFSYGDRKELKLRVGKRI

Q84JL3 E3 ubiquitin-protein ligase SINAT31.4e-0581.25Show/hide
Query:  NSFDGLIIQRNMAFFFSYGDRKELKLRVGKRI
        +S DGLIIQRNMA FFS GDRKELKLRV  RI
Subjt:  NSFDGLIIQRNMAFFFSYGDRKELKLRVGKRI

Q8S3N1 E3 ubiquitin-protein ligase SINAT53.2e-0578.12Show/hide
Query:  NSFDGLIIQRNMAFFFSYGDRKELKLRVGKRI
        +S DGLIIQRNMA FFS GD+KELKLRV  RI
Subjt:  NSFDGLIIQRNMAFFFSYGDRKELKLRVGKRI

Q9STN8 E3 ubiquitin-protein ligase SINAT45.4e-0578.12Show/hide
Query:  NSFDGLIIQRNMAFFFSYGDRKELKLRVGKRI
        +S DGLIIQRNMA FFS GDRKELKLRV  +I
Subjt:  NSFDGLIIQRNMAFFFSYGDRKELKLRVGKRI

Arabidopsis top hitse value%identityAlignment
AT3G58040.1 seven in absentia of Arabidopsis 21.2e-0468.75Show/hide
Query:  NSFDGLIIQRNMAFFFSYGDRKELKLRVGKRI
        +S DGLII RN+A +FS GDR+ELKLRV  RI
Subjt:  NSFDGLIIQRNMAFFFSYGDRKELKLRVGKRI

AT3G61790.1 Protein with RING/U-box and TRAF-like domains1.0e-0681.25Show/hide
Query:  NSFDGLIIQRNMAFFFSYGDRKELKLRVGKRI
        +S DGLIIQRNMA FFS GDRKELKLRV  RI
Subjt:  NSFDGLIIQRNMAFFFSYGDRKELKLRVGKRI

AT4G27880.1 Protein with RING/U-box and TRAF-like domains3.8e-0678.12Show/hide
Query:  NSFDGLIIQRNMAFFFSYGDRKELKLRVGKRI
        +S DGLIIQRNMA FFS GDRKELKLRV  +I
Subjt:  NSFDGLIIQRNMAFFFSYGDRKELKLRVGKRI

AT5G53360.1 TRAF-like superfamily protein2.2e-0678.12Show/hide
Query:  NSFDGLIIQRNMAFFFSYGDRKELKLRVGKRI
        +S DGLIIQRNMA FFS GD+KELKLRV  RI
Subjt:  NSFDGLIIQRNMAFFFSYGDRKELKLRVGKRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGTCTCAAAGAAAGCACATACCTGGAATCTCATTGTTGAAGAAGAGAAGGTTTCTCTCTCTCTTTCAACAAAAGCCCTCTCCTTGCAATTTCTTTCAAAATGCAA
CAGTTTCGATGGGCTCATTATTCAACGCAACATGGCATTCTTCTTCTCCTATGGGGATCGAAAGGAACTAAAGCTTAGGGTGGGCAAAAGGATCAAGTATGACTTTAGCT
TAAGGCAAATAGATGGATCTAGGTATGTCGTAAAGAAAACAAAGAAGGCTTTGGATTCGAAAGAAAAGAGTGTCAAAAAAGAAAAAGAAAAAGAAAATACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATGTCTCAAAGAAAGCACATACCTGGAATCTCATTGTTGAAGAAGAGAAGGTTTCTCTCTCTCTTTCAACAAAAGCCCTCTCCTTGCAATTTCTTTCAAAATGCAA
CAGTTTCGATGGGCTCATTATTCAACGCAACATGGCATTCTTCTTCTCCTATGGGGATCGAAAGGAACTAAAGCTTAGGGTGGGCAAAAGGATCAAGTATGACTTTAGCT
TAAGGCAAATAGATGGATCTAGGTATGTCGTAAAGAAAACAAAGAAGGCTTTGGATTCGAAAGAAAAGAGTGTCAAAAAAGAAAAAGAAAAAGAAAATACCTGA
Protein sequenceShow/hide protein sequence
MYVSKKAHTWNLIVEEEKVSLSLSTKALSLQFLSKCNSFDGLIIQRNMAFFFSYGDRKELKLRVGKRIKYDFSLRQIDGSRYVVKKTKKALDSKEKSVKKEKEKENT