; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G016110 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G016110
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAuxin-responsive protein
Genome locationchr11:24441584..24441967
RNA-Seq ExpressionLsi11G016110
SyntenyLsi11G016110
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051102.1 auxin-responsive protein SAUR71-like [Cucumis melo var. makuwa]1.5e-5996.12Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRSDSPS--AAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIPCHVLL
        MKQLIRRLSRVADSSQYCLLRSDSPS  AAATKLRRSRILRS TVPQGHVPVYVGEEMERFVVSAQLLNHPVF+ELLDKSAQEYGYEQKGVLHIPCHVLL
Subjt:  MKQLIRRLSRVADSSQYCLLRSDSPS--AAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIPCHVLL

Query:  FERVLEALRLGDYDSPHLQDLLSNLSLQS
        FERVLEALRLGDYDS HLQDLLSNLSLQS
Subjt:  FERVLEALRLGDYDSPHLQDLLSNLSLQS

XP_008466916.1 PREDICTED: auxin-responsive protein SAUR71-like [Cucumis melo]2.0e-5995.38Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRSDSPS---AAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIPCHVL
        MKQLIRRLSRVADSSQYCLLRSDSPS   AAATKLRRSRILRS TVPQGHVPVYVGEEMERFVVSAQLLNHPVF+ELLDKSAQEYGYEQKGVLHIPCHVL
Subjt:  MKQLIRRLSRVADSSQYCLLRSDSPS---AAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIPCHVL

Query:  LFERVLEALRLGDYDSPHLQDLLSNLSLQS
        LFERVLEALRLGDYDS HLQDLLSNLSLQS
Subjt:  LFERVLEALRLGDYDSPHLQDLLSNLSLQS

XP_022952057.1 auxin-responsive protein SAUR71-like [Cucurbita moschata]9.7e-5995.31Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRSDS-PSAAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIPCHVLLF
        MKQLIRRLSRVADSSQYCLLRSDS  +AAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVF+ELLDKSAQEYGYEQKGVLHIPCHVLLF
Subjt:  MKQLIRRLSRVADSSQYCLLRSDS-PSAAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIPCHVLLF

Query:  ERVLEALRLGDYDSPHLQDLLSNLSLQS
        ERVLEALRLGDYDS HLQDLLSNLSL+S
Subjt:  ERVLEALRLGDYDSPHLQDLLSNLSLQS

XP_023553664.1 auxin-responsive protein SAUR71-like [Cucurbita pepo subsp. pepo]1.3e-5894.57Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRSDS--PSAAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIPCHVLL
        MKQLIRRLSRVADSSQYCLLRSDS   +AAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVF+ELLDKSAQEYGYEQKGVLHIPCHVLL
Subjt:  MKQLIRRLSRVADSSQYCLLRSDS--PSAAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIPCHVLL

Query:  FERVLEALRLGDYDSPHLQDLLSNLSLQS
        FERVLEALRLGDYDS HLQDLLSNLSL+S
Subjt:  FERVLEALRLGDYDSPHLQDLLSNLSLQS

XP_038888278.1 auxin-responsive protein SAUR71 [Benincasa hispida]3.0e-6096.92Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRSDSPS---AAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIPCHVL
        MKQLIRRLSRVADSSQYCLLRSDSPS   AAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIPCHVL
Subjt:  MKQLIRRLSRVADSSQYCLLRSDSPS---AAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIPCHVL

Query:  LFERVLEALRLGDYDSPHLQDLLSNLSLQS
        LFERVLEALRLGDYDS HLQDLLSNLSLQS
Subjt:  LFERVLEALRLGDYDSPHLQDLLSNLSLQS

TrEMBL top hitse value%identityAlignment
A0A0A0K901 Uncharacterized protein2.6e-5792.13Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRSDSPSAAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIPCHVLLFE
        MKQLIRRLSRVADSS Y LLRSDSPS+AA KLRRSRILRS TVPQGHVPVYVGEEMERFVVSA LLNHPVF+ELLDKSAQEYGY+QKGVLHIPCHVLLFE
Subjt:  MKQLIRRLSRVADSSQYCLLRSDSPSAAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIPCHVLLFE

Query:  RVLEALRLGDYDSPHLQDLLSNLSLQS
        RVLEALRLGD+DS HLQDLLSNLSLQS
Subjt:  RVLEALRLGDYDSPHLQDLLSNLSLQS

A0A1S3CSH0 auxin-responsive protein SAUR71-like9.5e-6095.38Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRSDSPS---AAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIPCHVL
        MKQLIRRLSRVADSSQYCLLRSDSPS   AAATKLRRSRILRS TVPQGHVPVYVGEEMERFVVSAQLLNHPVF+ELLDKSAQEYGYEQKGVLHIPCHVL
Subjt:  MKQLIRRLSRVADSSQYCLLRSDSPS---AAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIPCHVL

Query:  LFERVLEALRLGDYDSPHLQDLLSNLSLQS
        LFERVLEALRLGDYDS HLQDLLSNLSLQS
Subjt:  LFERVLEALRLGDYDSPHLQDLLSNLSLQS

A0A5A7U5G4 Auxin-responsive protein SAUR71-like7.2e-6096.12Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRSDSPS--AAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIPCHVLL
        MKQLIRRLSRVADSSQYCLLRSDSPS  AAATKLRRSRILRS TVPQGHVPVYVGEEMERFVVSAQLLNHPVF+ELLDKSAQEYGYEQKGVLHIPCHVLL
Subjt:  MKQLIRRLSRVADSSQYCLLRSDSPS--AAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIPCHVLL

Query:  FERVLEALRLGDYDSPHLQDLLSNLSLQS
        FERVLEALRLGDYDS HLQDLLSNLSLQS
Subjt:  FERVLEALRLGDYDSPHLQDLLSNLSLQS

A0A6J1GJB9 auxin-responsive protein SAUR71-like4.7e-5995.31Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRSDS-PSAAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIPCHVLLF
        MKQLIRRLSRVADSSQYCLLRSDS  +AAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVF+ELLDKSAQEYGYEQKGVLHIPCHVLLF
Subjt:  MKQLIRRLSRVADSSQYCLLRSDS-PSAAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIPCHVLLF

Query:  ERVLEALRLGDYDSPHLQDLLSNLSLQS
        ERVLEALRLGDYDS HLQDLLSNLSL+S
Subjt:  ERVLEALRLGDYDSPHLQDLLSNLSLQS

A0A6J1HZY4 auxin-responsive protein SAUR712.3e-5895.28Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRSDSPSAAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIPCHVLLFE
        MKQLIRRLSRVADSSQYCLLRSDS  A ATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVF+ELLDKSAQEYGYEQKGVLHIPCHVLLFE
Subjt:  MKQLIRRLSRVADSSQYCLLRSDSPSAAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIPCHVLLFE

Query:  RVLEALRLGDYDSPHLQDLLSNLSLQS
        RVLEALRLGDYDS HLQDLLSNLSL+S
Subjt:  RVLEALRLGDYDSPHLQDLLSNLSLQS

SwissProt top hitse value%identityAlignment
O64538 Auxin-responsive protein SAUR401.9e-2854.96Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRS-------DSPSAAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIP
        MK LIRRLSR+ADSS     RS        + S++   ++R+ +  + +VP GHVPV VGE+ ERFVVSA+LLNHPVFV LL++SAQEYGY QKGVLHIP
Subjt:  MKQLIRRLSRVADSSQYCLLRS-------DSPSAAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIP

Query:  CHVLLFERVLEALRLGDYDSPHLQDLLSNLS
        C+V +FE+V+E+LR G  D     +L+++LS
Subjt:  CHVLLFERVLEALRLGDYDSPHLQDLLSNLS

Q9LTV3 Auxin-responsive protein SAUR725.2e-3965.89Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRSDS--PSAAATKLRRSRILR-----SGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIP
        MKQLIRRLSRVADS+QY LLRSDS  PS  +    RS + R     + +VP+GHVPVYVG+EMERFVVSA+LLNHPVF+ LL++SAQEYGYEQKGVL IP
Subjt:  MKQLIRRLSRVADSSQYCLLRSDS--PSAAATKLRRSRILR-----SGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIP

Query:  CHVLLFERVLEALRLGDYDSPHLQDLLSN
        CHVL+FER++E+LRLG      +QDL+ +
Subjt:  CHVLLFERVLEALRLGDYDSPHLQDLLSN

Q9SA49 Auxin-responsive protein SAUR415.6e-3358.09Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRSDSPSAAATKLRRSRI------------LRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKG
        MK LIRRLSRVADSS    +R  S S+   +    R+             R  TVP GHVPVYVGEEMERFVVSA+L+NHP+FV LL++SAQEYGY QKG
Subjt:  MKQLIRRLSRVADSSQYCLLRSDSPSAAATKLRRSRI------------LRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKG

Query:  VLHIPCHVLLFERVLEALRLGDYD-SPHLQDLLSNL
        VLHIPCHV++FERV+E LRLG ++ S  L++L+++L
Subjt:  VLHIPCHVLLFERVLEALRLGDYD-SPHLQDLLSNL

Q9SGU2 Auxin-responsive protein SAUR711.2e-3570.64Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRSDSPSAAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIPCHVLLFE
        MKQLIRRLSRVADS+QY LLRS+S      K +         VP+GHVPVYVG EMERFVV+A+LLNHPVFV LL +SAQEYGYEQ+GVL IPCHVL+FE
Subjt:  MKQLIRRLSRVADSSQYCLLRSDSPSAAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIPCHVLLFE

Query:  RVLEALRLG
        R+LE+LRLG
Subjt:  RVLEALRLG

Q9ZUZ3 Auxin-responsive protein SAUR321.0e-1040.96Show/hide
Query:  KLRRSRILRSGTVPQGHVPVYV---GEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIPCHVLLFERVLEALRLGD
        +L R + ++   VP+G + + V   GEE +RF+V     NHP+F++LL ++  EYG++QKG + IPCHV  F R ++AL  G+
Subjt:  KLRRSRILRSGTVPQGHVPVYV---GEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIPCHVLLFERVLEALRLGD

Arabidopsis top hitse value%identityAlignment
AT1G16510.1 SAUR-like auxin-responsive protein family4.0e-3458.09Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRSDSPSAAATKLRRSRI------------LRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKG
        MK LIRRLSRVADSS    +R  S S+   +    R+             R  TVP GHVPVYVGEEMERFVVSA+L+NHP+FV LL++SAQEYGY QKG
Subjt:  MKQLIRRLSRVADSSQYCLLRSDSPSAAATKLRRSRI------------LRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKG

Query:  VLHIPCHVLLFERVLEALRLGDYD-SPHLQDLLSNL
        VLHIPCHV++FERV+E LRLG ++ S  L++L+++L
Subjt:  VLHIPCHVLLFERVLEALRLGDYD-SPHLQDLLSNL

AT1G56150.1 SAUR-like auxin-responsive protein family8.5e-3770.64Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRSDSPSAAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIPCHVLLFE
        MKQLIRRLSRVADS+QY LLRS+S      K +         VP+GHVPVYVG EMERFVV+A+LLNHPVFV LL +SAQEYGYEQ+GVL IPCHVL+FE
Subjt:  MKQLIRRLSRVADSSQYCLLRSDSPSAAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIPCHVLLFE

Query:  RVLEALRLG
        R+LE+LRLG
Subjt:  RVLEALRLG

AT1G79130.1 SAUR-like auxin-responsive protein family1.3e-2954.96Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRS-------DSPSAAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIP
        MK LIRRLSR+ADSS     RS        + S++   ++R+ +  + +VP GHVPV VGE+ ERFVVSA+LLNHPVFV LL++SAQEYGY QKGVLHIP
Subjt:  MKQLIRRLSRVADSSQYCLLRS-------DSPSAAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIP

Query:  CHVLLFERVLEALRLGDYDSPHLQDLLSNLS
        C+V +FE+V+E+LR G  D     +L+++LS
Subjt:  CHVLLFERVLEALRLGDYDSPHLQDLLSNLS

AT3G12830.1 SAUR-like auxin-responsive protein family3.7e-4065.89Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRSDS--PSAAATKLRRSRILR-----SGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIP
        MKQLIRRLSRVADS+QY LLRSDS  PS  +    RS + R     + +VP+GHVPVYVG+EMERFVVSA+LLNHPVF+ LL++SAQEYGYEQKGVL IP
Subjt:  MKQLIRRLSRVADSSQYCLLRSDS--PSAAATKLRRSRILR-----SGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIP

Query:  CHVLLFERVLEALRLGDYDSPHLQDLLSN
        CHVL+FER++E+LRLG      +QDL+ +
Subjt:  CHVLLFERVLEALRLGDYDSPHLQDLLSN

AT3G20220.1 SAUR-like auxin-responsive protein family2.5e-1248.39Show/hide
Query:  VPQGHVPVYVG-EEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIPCHVLLFERVL
        VP+GH+ VYVG EE +RFV+  + L +P F  L+D+ A E+GY+ +G +HIPC   +FE +L
Subjt:  VPQGHVPVYVG-EEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIPCHVLLFERVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAGTTGATCCGCCGCCTTTCTCGTGTTGCCGATTCCTCGCAGTATTGTCTTCTCCGCTCCGACTCTCCTTCCGCCGCCGCCACCAAACTTCGCCGTTCTCGAAT
CCTCCGTTCCGGCACCGTCCCGCAAGGCCACGTCCCCGTTTACGTCGGCGAAGAGATGGAACGCTTCGTCGTCAGCGCTCAACTCTTAAATCACCCTGTTTTCGTCGAGC
TACTCGATAAATCCGCCCAAGAGTACGGTTACGAACAGAAAGGCGTTCTACATATTCCTTGTCACGTTCTTCTCTTTGAGCGTGTTCTTGAGGCTCTCAGACTCGGTGAT
TACGATTCTCCCCATCTTCAAGATCTTCTTTCCAATCTCTCTCTCCAGTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCAGTTGATCCGCCGCCTTTCTCGTGTTGCCGATTCCTCGCAGTATTGTCTTCTCCGCTCCGACTCTCCTTCCGCCGCCGCCACCAAACTTCGCCGTTCTCGAAT
CCTCCGTTCCGGCACCGTCCCGCAAGGCCACGTCCCCGTTTACGTCGGCGAAGAGATGGAACGCTTCGTCGTCAGCGCTCAACTCTTAAATCACCCTGTTTTCGTCGAGC
TACTCGATAAATCCGCCCAAGAGTACGGTTACGAACAGAAAGGCGTTCTACATATTCCTTGTCACGTTCTTCTCTTTGAGCGTGTTCTTGAGGCTCTCAGACTCGGTGAT
TACGATTCTCCCCATCTTCAAGATCTTCTTTCCAATCTCTCTCTCCAGTCATGA
Protein sequenceShow/hide protein sequence
MKQLIRRLSRVADSSQYCLLRSDSPSAAATKLRRSRILRSGTVPQGHVPVYVGEEMERFVVSAQLLNHPVFVELLDKSAQEYGYEQKGVLHIPCHVLLFERVLEALRLGD
YDSPHLQDLLSNLSLQS