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Lsi11G016190 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G016190
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionNAC domain-containing protein
Genome locationchr11:24541161..24541412
RNA-Seq ExpressionLsi11G016190
SyntenyLsi11G016190
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003441 - NAC domain
IPR036093 - NAC domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056532.1 transcription factor JUNGBRUNNEN 1-like [Cucumis melo var. makuwa]2.5e-2375Show/hide
Query:  METPEVCNGEG-EDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLPCKPKLSSNISKM
        METPEVCNGEG ++++I+LPGFRFHPTDEELVSFYLRRKVEKR +S+ELIKQ+DIYK+NPWDLP      S+ SKM
Subjt:  METPEVCNGEG-EDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLPCKPKLSSNISKM

TYK12100.1 transcription factor JUNGBRUNNEN 1-like [Cucumis melo var. makuwa]2.5e-2375Show/hide
Query:  METPEVCNGEG-EDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLPCKPKLSSNISKM
        METPEVCNGEG ++++I+LPGFRFHPTDEELVSFYLRRKVEKR +S+ELIKQ+DIYK+NPWDLP      S+ SKM
Subjt:  METPEVCNGEG-EDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLPCKPKLSSNISKM

XP_004139890.2 transcription factor JUNGBRUNNEN 1 [Cucumis sativus]8.6e-2476.32Show/hide
Query:  METPEVCNGEG-EDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLPCKPKLSSNISKM
        METPEVCNGEG ++D+I+LPGFRFHPTDEELVSFYLRRKVEKR +S+ELIKQ+DIYK+NPWDLP      S+ SKM
Subjt:  METPEVCNGEG-EDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLPCKPKLSSNISKM

XP_008466914.1 PREDICTED: transcription factor JUNGBRUNNEN 1-like, partial [Cucumis melo]2.5e-2375Show/hide
Query:  METPEVCNGEG-EDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLPCKPKLSSNISKM
        METPEVCNGEG ++++I+LPGFRFHPTDEELVSFYLRRKVEKR +S+ELIKQ+DIYK+NPWDLP      S+ SKM
Subjt:  METPEVCNGEG-EDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLPCKPKLSSNISKM

XP_038888171.1 putative NAC domain-containing protein 94 [Benincasa hispida]7.1e-2692.06Show/hide
Query:  METPEVCNGEGEDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLP
        METPEVCNGEG+DDQI LPGFRFHPTDEELVSFYLRRKVEKR ISLELIKQ+DIYK+NPWDLP
Subjt:  METPEVCNGEGEDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLP

TrEMBL top hitse value%identityAlignment
A0A0A0K418 NAC domain-containing protein4.2e-2476.32Show/hide
Query:  METPEVCNGEG-EDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLPCKPKLSSNISKM
        METPEVCNGEG ++D+I+LPGFRFHPTDEELVSFYLRRKVEKR +S+ELIKQ+DIYK+NPWDLP      S+ SKM
Subjt:  METPEVCNGEG-EDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLPCKPKLSSNISKM

A0A1S3CSB0 transcription factor JUNGBRUNNEN 1-like1.2e-2375Show/hide
Query:  METPEVCNGEG-EDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLPCKPKLSSNISKM
        METPEVCNGEG ++++I+LPGFRFHPTDEELVSFYLRRKVEKR +S+ELIKQ+DIYK+NPWDLP      S+ SKM
Subjt:  METPEVCNGEG-EDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLPCKPKLSSNISKM

A0A5A7UL49 Transcription factor JUNGBRUNNEN 1-like1.2e-2375Show/hide
Query:  METPEVCNGEG-EDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLPCKPKLSSNISKM
        METPEVCNGEG ++++I+LPGFRFHPTDEELVSFYLRRKVEKR +S+ELIKQ+DIYK+NPWDLP      S+ SKM
Subjt:  METPEVCNGEG-EDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLPCKPKLSSNISKM

A0A5D3CL13 Transcription factor JUNGBRUNNEN 1-like1.2e-2375Show/hide
Query:  METPEVCNGEG-EDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLPCKPKLSSNISKM
        METPEVCNGEG ++++I+LPGFRFHPTDEELVSFYLRRKVEKR +S+ELIKQ+DIYK+NPWDLP      S+ SKM
Subjt:  METPEVCNGEG-EDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLPCKPKLSSNISKM

A0A6J1GLV8 transcription factor JUNGBRUNNEN 1-like1.8e-2287.3Show/hide
Query:  ETPEVCNGEGE-DDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLP
        ETPEV NG+G+ DDQI LPGFRFHPTDEELVSFYLRRKVEKR ISLELIKQ+DIYK+NPWDLP
Subjt:  ETPEVCNGEGE-DDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLP

SwissProt top hitse value%identityAlignment
Q9FFI5 NAC domain-containing protein 869.3e-1357.69Show/hide
Query:  PGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLPCKPKLSS
        PGFRFHPTDEEL+++YL+RK+  + I LE+I ++D+YK  PWDLP K  + S
Subjt:  PGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLPCKPKLSS

Q9FIW5 Putative NAC domain-containing protein 945.3e-1663.49Show/hide
Query:  METPEVCNGEGEDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLP
        M+  E  N E  DD + LPGFRFHPTDEELVSFYL+RKV  + +  +LIK++DIYKY+PWDLP
Subjt:  METPEVCNGEGEDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLP

Q9SK55 Transcription factor JUNGBRUNNEN 13.7e-1773.08Show/hide
Query:  EDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLP
        E+++  LPGFRFHPTDEEL+ +YLRRKVE + I LELIKQ+DIYKY+PWDLP
Subjt:  EDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLP

Q9ZVH0 Protein FEZ3.7e-1766.07Show/hide
Query:  NGEGEDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLP
        +G+ + + + LPGFRFHPTDEELVSFYL+RKV+   +S+ELI+Q+DIYKY+PWDLP
Subjt:  NGEGEDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLP

Q9ZVP8 NAC domain-containing protein 351.1e-1355.56Show/hide
Query:  EGEDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLP
        +  D  + +PGFRFHPT+EEL+ FYLRRKVE +  ++ELI  +D+Y+Y+PW+LP
Subjt:  EGEDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLP

Arabidopsis top hitse value%identityAlignment
AT1G26870.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein2.6e-1866.07Show/hide
Query:  NGEGEDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLP
        +G+ + + + LPGFRFHPTDEELVSFYL+RKV+   +S+ELI+Q+DIYKY+PWDLP
Subjt:  NGEGEDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLP

AT2G02450.1 NAC domain containing protein 357.8e-1555.56Show/hide
Query:  EGEDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLP
        +  D  + +PGFRFHPT+EEL+ FYLRRKVE +  ++ELI  +D+Y+Y+PW+LP
Subjt:  EGEDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLP

AT2G02450.2 NAC domain containing protein 357.8e-1555.56Show/hide
Query:  EGEDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLP
        +  D  + +PGFRFHPT+EEL+ FYLRRKVE +  ++ELI  +D+Y+Y+PW+LP
Subjt:  EGEDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLP

AT2G43000.1 NAC domain containing protein 422.6e-1873.08Show/hide
Query:  EDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLP
        E+++  LPGFRFHPTDEEL+ +YLRRKVE + I LELIKQ+DIYKY+PWDLP
Subjt:  EDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLP

AT5G39820.1 NAC domain containing protein 943.7e-1763.49Show/hide
Query:  METPEVCNGEGEDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLP
        M+  E  N E  DD + LPGFRFHPTDEELVSFYL+RKV  + +  +LIK++DIYKY+PWDLP
Subjt:  METPEVCNGEGEDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACTCCAGAAGTTTGCAACGGCGAAGGCGAGGACGATCAAATCACGCTCCCCGGATTCCGCTTTCATCCGACGGACGAAGAACTCGTGAGCTTTTACCTCCGACG
AAAAGTAGAGAAAAGACACATCAGCCTTGAACTCATCAAACAAATGGACATCTACAAATACAATCCATGGGATCTTCCTTGTAAGCCTAAACTTAGTAGTAATATTAGTA
AAATGTTATTATTACAGAATATATTGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACTCCAGAAGTTTGCAACGGCGAAGGCGAGGACGATCAAATCACGCTCCCCGGATTCCGCTTTCATCCGACGGACGAAGAACTCGTGAGCTTTTACCTCCGACG
AAAAGTAGAGAAAAGACACATCAGCCTTGAACTCATCAAACAAATGGACATCTACAAATACAATCCATGGGATCTTCCTTGTAAGCCTAAACTTAGTAGTAATATTAGTA
AAATGTTATTATTACAGAATATATTGATTTGA
Protein sequenceShow/hide protein sequence
METPEVCNGEGEDDQITLPGFRFHPTDEELVSFYLRRKVEKRHISLELIKQMDIYKYNPWDLPCKPKLSSNISKMLLLQNILI