; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G016200 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G016200
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTranscription factor JUNGBRUNNEN 1-like
Genome locationchr11:24541579..24542961
RNA-Seq ExpressionLsi11G016200
SyntenyLsi11G016200
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056532.1 transcription factor JUNGBRUNNEN 1-like [Cucumis melo var. makuwa]9.5e-4364.44Show/hide
Query:  WTLCRIFKRNVSGRRYGSSGN--WNNKQAAAAATTIKNP-MNVEKNSEI---------MMGSGAGAEKG---NNNNGEISYINF-SCE-SMIIQTEKKPL
        W +  IFKRNVSGRRYG+SG+  WNNKQ   AA +IKNP ++ +KN  +         +M     +EKG   NNNNGEISYINF SCE SMIIQTEKKPL
Subjt:  WTLCRIFKRNVSGRRYGSSGN--WNNKQAAAAATTIKNP-MNVEKNSEI---------MMGSGAGAEKG---NNNNGEISYINF-SCE-SMIIQTEKKPL

Query:  LLD-QNYLNHNN----NNHYQEWNSNSNNNNNNNYDQYSSCSSSGIISPPIAYPTNQLVDVNDFFTNSNWDELRSMVDML
        LLD  NYLN+NN    ++H+QEWN+     NNN+YDQYSSCSSSGIISP I YPTNQ +D+NDFFTNSNWDELRSMVDML
Subjt:  LLD-QNYLNHNN----NNHYQEWNSNSNNNNNNNYDQYSSCSSSGIISPPIAYPTNQLVDVNDFFTNSNWDELRSMVDML

KAE8646102.1 hypothetical protein Csa_016723 [Cucumis sativus]1.8e-4968.16Show/hide
Query:  EIWTLCRIFKRNVSGRRYGSSG--NWNNKQAAAAATT-IKNP-MNVEKNSEIMMGSG---------AGAEKG---NNNNGEISYINF-SCE-SMIIQTEK
        EIWTLCRIFKRNVSGRRYG+SG  NWNNKQ AA +TT IKNP ++ +KN  +   +            +EKG   NNNNGEISYINF SC+ SMIIQTEK
Subjt:  EIWTLCRIFKRNVSGRRYGSSG--NWNNKQAAAAATT-IKNP-MNVEKNSEIMMGSG---------AGAEKG---NNNNGEISYINF-SCE-SMIIQTEK

Query:  KPLLLD-QNYLNHNNNNHYQEWNSNSNNNNNNNYDQYSSCSSSGIISPPIAYPTNQLVDVNDFFTNSNWDELRSMVDML
        KPLLLD  NYLN+N+++H+QEWN+     NNN+YDQYSSCSSSGIISP I YPTNQ +D+NDFFTNSNWDELRSMVDML
Subjt:  KPLLLD-QNYLNHNNNNHYQEWNSNSNNNNNNNYDQYSSCSSSGIISPPIAYPTNQLVDVNDFFTNSNWDELRSMVDML

XP_004139890.2 transcription factor JUNGBRUNNEN 1 [Cucumis sativus]1.8e-4968.16Show/hide
Query:  EIWTLCRIFKRNVSGRRYGSSG--NWNNKQAAAAATT-IKNP-MNVEKNSEIMMGSG---------AGAEKG---NNNNGEISYINF-SCE-SMIIQTEK
        EIWTLCRIFKRNVSGRRYG+SG  NWNNKQ AA +TT IKNP ++ +KN  +   +            +EKG   NNNNGEISYINF SC+ SMIIQTEK
Subjt:  EIWTLCRIFKRNVSGRRYGSSG--NWNNKQAAAAATT-IKNP-MNVEKNSEIMMGSG---------AGAEKG---NNNNGEISYINF-SCE-SMIIQTEK

Query:  KPLLLD-QNYLNHNNNNHYQEWNSNSNNNNNNNYDQYSSCSSSGIISPPIAYPTNQLVDVNDFFTNSNWDELRSMVDML
        KPLLLD  NYLN+N+++H+QEWN+     NNN+YDQYSSCSSSGIISP I YPTNQ +D+NDFFTNSNWDELRSMVDML
Subjt:  KPLLLD-QNYLNHNNNNHYQEWNSNSNNNNNNNYDQYSSCSSSGIISPPIAYPTNQLVDVNDFFTNSNWDELRSMVDML

XP_023553947.1 transcription factor JUNGBRUNNEN 1-like [Cucurbita pepo subsp. pepo]2.4e-3056.02Show/hide
Query:  EIWTLCRIFKRNVSGRRYGSSGNWNNKQAAAAATTIKNPMNVEKNSEIMMGSGAGAEKGNNNNGEISYINFSCESMIIQTEKKPLLLDQNYLNHNNNNHY
        EIWTLCRIFKRNVS RRYG               T KN M+ EKN+  M            +N +   +NFSCESMIIQTEKKP L   NY NH      
Subjt:  EIWTLCRIFKRNVSGRRYGSSGNWNNKQAAAAATTIKNPMNVEKNSEIMMGSGAGAEKGNNNNGEISYINFSCESMIIQTEKKPLLLDQNYLNHNNNNHY

Query:  QEWNSNSNNNNNNNYDQYSSCS------SSGIISPPIAYPTNQLVDVNDFFTNSNWDELRSMVDML
        QEW         NNYDQYSS S      SSGIISPPI YPTNQ +DVNDFFTNSNWDELRS+VDML
Subjt:  QEWNSNSNNNNNNNYDQYSSCS------SSGIISPPIAYPTNQLVDVNDFFTNSNWDELRSMVDML

XP_038888171.1 putative NAC domain-containing protein 94 [Benincasa hispida]8.6e-6077.84Show/hide
Query:  EIWTLCRIFKRNVSGRRYGSSGNWNNKQAAAAATTIKNPMNVEKNSEIMMGS------GAGAEKGNNNNGEISYINFSCESMIIQTEKKPLLLDQNYLNH
        EIWTLCRIFKRNVSGRRYG +GNWNNKQAAAAAT IKNPM  EKNS + M +      G+ AE+G NN+GEISYINFSCESMIIQTEKKPLLLD NYLN+
Subjt:  EIWTLCRIFKRNVSGRRYGSSGNWNNKQAAAAATTIKNPMNVEKNSEIMMGS------GAGAEKGNNNNGEISYINFSCESMIIQTEKKPLLLDQNYLNH

Query:  NNNN---HYQEWNSNSNNNNNNNYDQYSSCS-------SSGIISPPIAYPTNQLVDVNDFFTNSNWDELRSMVDML
        NNNN   H+QEWNS    NNNNNYDQYSSCS       SSGIISPPI YPTNQLVDVNDFFTNSNWDELRSMVDML
Subjt:  NNNN---HYQEWNSNSNNNNNNNYDQYSSCS-------SSGIISPPIAYPTNQLVDVNDFFTNSNWDELRSMVDML

TrEMBL top hitse value%identityAlignment
A0A0A0K418 NAC domain-containing protein8.7e-5068.16Show/hide
Query:  EIWTLCRIFKRNVSGRRYGSSG--NWNNKQAAAAATT-IKNP-MNVEKNSEIMMGSG---------AGAEKG---NNNNGEISYINF-SCE-SMIIQTEK
        EIWTLCRIFKRNVSGRRYG+SG  NWNNKQ AA +TT IKNP ++ +KN  +   +            +EKG   NNNNGEISYINF SC+ SMIIQTEK
Subjt:  EIWTLCRIFKRNVSGRRYGSSG--NWNNKQAAAAATT-IKNP-MNVEKNSEIMMGSG---------AGAEKG---NNNNGEISYINF-SCE-SMIIQTEK

Query:  KPLLLD-QNYLNHNNNNHYQEWNSNSNNNNNNNYDQYSSCSSSGIISPPIAYPTNQLVDVNDFFTNSNWDELRSMVDML
        KPLLLD  NYLN+N+++H+QEWN+     NNN+YDQYSSCSSSGIISP I YPTNQ +D+NDFFTNSNWDELRSMVDML
Subjt:  KPLLLD-QNYLNHNNNNHYQEWNSNSNNNNNNNYDQYSSCSSSGIISPPIAYPTNQLVDVNDFFTNSNWDELRSMVDML

A0A5A7UL49 Transcription factor JUNGBRUNNEN 1-like4.6e-4364.44Show/hide
Query:  WTLCRIFKRNVSGRRYGSSGN--WNNKQAAAAATTIKNP-MNVEKNSEI---------MMGSGAGAEKG---NNNNGEISYINF-SCE-SMIIQTEKKPL
        W +  IFKRNVSGRRYG+SG+  WNNKQ   AA +IKNP ++ +KN  +         +M     +EKG   NNNNGEISYINF SCE SMIIQTEKKPL
Subjt:  WTLCRIFKRNVSGRRYGSSGN--WNNKQAAAAATTIKNP-MNVEKNSEI---------MMGSGAGAEKG---NNNNGEISYINF-SCE-SMIIQTEKKPL

Query:  LLD-QNYLNHNN----NNHYQEWNSNSNNNNNNNYDQYSSCSSSGIISPPIAYPTNQLVDVNDFFTNSNWDELRSMVDML
        LLD  NYLN+NN    ++H+QEWN+     NNN+YDQYSSCSSSGIISP I YPTNQ +D+NDFFTNSNWDELRSMVDML
Subjt:  LLD-QNYLNHNN----NNHYQEWNSNSNNNNNNNYDQYSSCSSSGIISPPIAYPTNQLVDVNDFFTNSNWDELRSMVDML

A0A6J1D1B7 transcription factor JUNGBRUNNEN 1-like2.0e-3058.14Show/hide
Query:  EIWTLCRIFKRNVSGRRYGSSGNWNNKQAAAAATTIK-NPMNVEKNSEIMMG-SGAGAEKGNNNNGEISYINFSCESMII---QTEKKPLLLDQNYLNHN
        EIWTLCRIFKRNVS RRYGSS  WN +   +  TT K NPM    N+ I     GA  +  +  +GEISYINFSCESMII   Q EKKP +L QNY N  
Subjt:  EIWTLCRIFKRNVSGRRYGSSGNWNNKQAAAAATTIK-NPMNVEKNSEIMMG-SGAGAEKGNNNNGEISYINFSCESMII---QTEKKPLLLDQNYLNHN

Query:  NNNHYQEWNSNSNNNNNNNYDQYSSC-------SSSGIISPPIAYPTNQLVDVNDFFTNSNWDELRSMVDML
              EWNSN NNN  +  +  S C       SSSGIISPP+   TNQL DVNDFFTNSNWDELRSMV ML
Subjt:  NNNHYQEWNSNSNNNNNNNYDQYSSC-------SSSGIISPPIAYPTNQLVDVNDFFTNSNWDELRSMVDML

A0A6J1GLV8 transcription factor JUNGBRUNNEN 1-like7.6e-3055.42Show/hide
Query:  EIWTLCRIFKRNVSGRRYGSSGNWNNKQAAAAATTIKNPMNVEKNSEIMMGSGAGAEKGNNNNGEISYINFSCESMIIQTEKKPLLLDQNYLNHNNNNHY
        EIWTLCRIFKRNVS RRYG               T KN M+ EKN+  M             N +   +N SCESMIIQTEKKP L   NY NH      
Subjt:  EIWTLCRIFKRNVSGRRYGSSGNWNNKQAAAAATTIKNPMNVEKNSEIMMGSGAGAEKGNNNNGEISYINFSCESMIIQTEKKPLLLDQNYLNHNNNNHY

Query:  QEWNSNSNNNNNNNYDQYSSCS------SSGIISPPIAYPTNQLVDVNDFFTNSNWDELRSMVDML
        QEW         NNYDQYSS S      SSGIISPPI YPTNQ +DVNDFFTNSNWDELRS+VDML
Subjt:  QEWNSNSNNNNNNNYDQYSSCS------SSGIISPPIAYPTNQLVDVNDFFTNSNWDELRSMVDML

A0A6J1HZZ9 transcription factor JUNGBRUNNEN 1-like1.4e-2854.82Show/hide
Query:  EIWTLCRIFKRNVSGRRYGSSGNWNNKQAAAAATTIKNPMNVEKNSEIMMGSGAGAEKGNNNNGEISYINFSCESMIIQTEKKPLLLDQNYLNHNNNNHY
        EIWTLCRIFKRNVS RRYG               T KN M+ EKN+  M             N +   +NFS ES IIQTEKKP L   NY NH      
Subjt:  EIWTLCRIFKRNVSGRRYGSSGNWNNKQAAAAATTIKNPMNVEKNSEIMMGSGAGAEKGNNNNGEISYINFSCESMIIQTEKKPLLLDQNYLNHNNNNHY

Query:  QEWNSNSNNNNNNNYDQYSSCS------SSGIISPPIAYPTNQLVDVNDFFTNSNWDELRSMVDML
        QEW         NNYDQYSS S      SSGIISPPI YPTNQ +DVNDFFTNSNWDELRS+VDML
Subjt:  QEWNSNSNNNNNNNYDQYSSCS------SSGIISPPIAYPTNQLVDVNDFFTNSNWDELRSMVDML

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAATTTGGACATTGTGTAGGATATTCAAGAGGAATGTGAGTGGGAGAAGATATGGATCATCAGGAAATTGGAATAACAAGCAGGCGGCGGCAGCAGCAACAAC
AATCAAAAACCCTATGAATGTAGAAAAGAACAGTGAAATTATGATGGGATCAGGAGCTGGTGCTGAAAAAGGTAATAATAATAATGGAGAAATTAGTTACATCAACTTCA
GCTGTGAATCCATGATTATCCAGACAGAGAAGAAGCCATTACTTCTTGATCAAAATTACCTCAACCACAATAATAATAATCATTATCAAGAATGGAATAGCAATAGCAAT
AATAATAATAATAATAACTATGATCAATATAGCAGCTGTTCTTCAAGTGGTATTATTTCACCTCCAATTGCTTACCCAACAAATCAGCTTGTTGATGTCAATGATTTCTT
CACTAATAGCAATTGGGATGAGCTGAGATCAATGGTGGACATGTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAAATTTGGACATTGTGTAGGATATTCAAGAGGAATGTGAGTGGGAGAAGATATGGATCATCAGGAAATTGGAATAACAAGCAGGCGGCGGCAGCAGCAACAAC
AATCAAAAACCCTATGAATGTAGAAAAGAACAGTGAAATTATGATGGGATCAGGAGCTGGTGCTGAAAAAGGTAATAATAATAATGGAGAAATTAGTTACATCAACTTCA
GCTGTGAATCCATGATTATCCAGACAGAGAAGAAGCCATTACTTCTTGATCAAAATTACCTCAACCACAATAATAATAATCATTATCAAGAATGGAATAGCAATAGCAAT
AATAATAATAATAATAACTATGATCAATATAGCAGCTGTTCTTCAAGTGGTATTATTTCACCTCCAATTGCTTACCCAACAAATCAGCTTGTTGATGTCAATGATTTCTT
CACTAATAGCAATTGGGATGAGCTGAGATCAATGGTGGACATGTTGTAGATCCAGATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTAAAATCC
ATCACATAATTCTCT
Protein sequenceShow/hide protein sequence
MEEIWTLCRIFKRNVSGRRYGSSGNWNNKQAAAAATTIKNPMNVEKNSEIMMGSGAGAEKGNNNNGEISYINFSCESMIIQTEKKPLLLDQNYLNHNNNNHYQEWNSNSN
NNNNNNYDQYSSCSSSGIISPPIAYPTNQLVDVNDFFTNSNWDELRSMVDML