; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G016260 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G016260
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRWP-RK domain-containing protein
Genome locationchr11:24613189..24614861
RNA-Seq ExpressionLsi11G016260
SyntenyLsi11G016260
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148047.1 uncharacterized protein LOC111016830 [Momordica charantia]1.4e-6178.92Show/hide
Query:  MSKLNGAPQS-LQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFK-VVNDGFISLIDQEKSESIE
        MSKLNGAPQS LQQQ GNIN QMRR Q+VQSTN VQG   L+EFKYGFPSGGLPS+SNKWWGSS  DETNN ED KH+FK VV DG ISLIDQEKSESIE
Subjt:  MSKLNGAPQS-LQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFK-VVNDGFISLIDQEKSESIE

Query:  EDLQADLQGTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS
        EDLQADL GTRLLTALRKRS+ERGRK LK+G+Y H   +NKLSK+E+SLLLNIF+SS PNEW++NS
Subjt:  EDLQADLQGTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS

XP_022930611.1 uncharacterized protein LOC111437021 isoform X1 [Cucurbita moschata]3.9e-7569.33Show/hide
Query:  DLSTAIPAAALVRVTASSRPPLLFLTPS---PNTSLCHFTGRCPVPYKQSLPIGIDQKIATITKNFNKPVVNKKMSKLNGAPQSLQQQLGNINTQMRRSQ
        DLST IPAAALVRV+        FL PS   PN    +F     +   Q  P  I Q             VN+KMSKLNG PQSLQ   GNIN Q+RR  
Subjt:  DLSTAIPAAALVRVTASSRPPLLFLTPS---PNTSLCHFTGRCPVPYKQSLPIGIDQKIATITKNFNKPVVNKKMSKLNGAPQSLQQQLGNINTQMRRSQ

Query:  NVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEEDLQADLQGTRLLTALRKRSVERGRKVL
        NVQSTNWVQGP SLDEFKYGFPSGGLPSISNKWWGSSC DETNN  DDKHHFKVVNDG  S+IDQEKS SIEEDLQADLQGT LLTALRKRS+ERGRKVL
Subjt:  NVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEEDLQADLQGTRLLTALRKRSVERGRKVL

Query:  KHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS
        KHGN  HG  LNKLSKKE+SLLLNIFRSS P+EW+NNS
Subjt:  KHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS

XP_022989266.1 uncharacterized protein LOC111486389 [Cucurbita maxima]3.3e-6682.04Show/hide
Query:  MSKLNGAPQSLQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEED
        MSKLNG PQSLQ   GNIN Q+RR  NVQSTNWVQGP SLDEFKYGFPSGGLPSISNKWWGSSC DETNN   DKHHFKVVNDG  S+IDQEKS SIEED
Subjt:  MSKLNGAPQSLQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEED

Query:  LQADLQGTRLLTALRKRSVERGRKVLKHGNYSHG---QSLNKLSKKEQSLLLNIFRSSTPNEWMNNS
        LQADLQGT LLTALRKRS+ERGRKVLKHGN  HG     LNKLSKKE+SLLLNIFRSS P+EW+NNS
Subjt:  LQADLQGTRLLTALRKRSVERGRKVLKHGNYSHG---QSLNKLSKKEQSLLLNIFRSSTPNEWMNNS

XP_023529351.1 uncharacterized protein LOC111792233 [Cucurbita pepo subsp. pepo]1.2e-6884.15Show/hide
Query:  MSKLNGAPQSLQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEED
        MSKLNG PQSLQ   GNIN Q+RR  NVQSTNWVQGP SLDEFKYGFPSGGLPSISNKWWGSSC DETNN  DDKHHFKVVNDG  S+IDQEKS SIEED
Subjt:  MSKLNGAPQSLQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEED

Query:  LQADLQGTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS
        LQADLQGT LLTALRKRS+ERGRKVLKHGN  HG  LNKLSKKE+SLLLNIFRSS P+EW+NNS
Subjt:  LQADLQGTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS

XP_038887241.1 uncharacterized protein LOC120077433 [Benincasa hispida]3.5e-7691.46Show/hide
Query:  MSKLNGAPQSLQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEED
        MSKLNGAPQSL QQLGNIN QMRRSQNVQSTNWVQGP+SLDEFKYGFPSGGLPS+SNKWWGSSC DETNN EDDKHHFKVVNDGF SLID EKSESI ED
Subjt:  MSKLNGAPQSLQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEED

Query:  LQADLQGTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS
        LQADLQGT LLTALRKRSV RGRKVL+HG YSHGQSLNKLSKKEQSLLLNIFRSSTPNEWM+NS
Subjt:  LQADLQGTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS

TrEMBL top hitse value%identityAlignment
A0A6J1D407 uncharacterized protein LOC1110168306.9e-6278.92Show/hide
Query:  MSKLNGAPQS-LQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFK-VVNDGFISLIDQEKSESIE
        MSKLNGAPQS LQQQ GNIN QMRR Q+VQSTN VQG   L+EFKYGFPSGGLPS+SNKWWGSS  DETNN ED KH+FK VV DG ISLIDQEKSESIE
Subjt:  MSKLNGAPQS-LQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFK-VVNDGFISLIDQEKSESIE

Query:  EDLQADLQGTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS
        EDLQADL GTRLLTALRKRS+ERGRK LK+G+Y H   +NKLSK+E+SLLLNIF+SS PNEW++NS
Subjt:  EDLQADLQGTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS

A0A6J1ER19 uncharacterized protein LOC111437021 isoform X23.2e-5966.83Show/hide
Query:  DLSTAIPAAALVRVTASSRPPLLFLTPS---PNTSLCHFTGRCPVPYKQSLPIGIDQKIATITKNFNKPVVNKKMSKLNGAPQSLQQQLGNINTQMRRSQ
        DLST IPAAALVRV+        FL PS   PN    +F     +   Q  P  I Q             VN+KMSKLNG PQSLQ   GNIN Q+RR  
Subjt:  DLSTAIPAAALVRVTASSRPPLLFLTPS---PNTSLCHFTGRCPVPYKQSLPIGIDQKIATITKNFNKPVVNKKMSKLNGAPQSLQQQLGNINTQMRRSQ

Query:  NVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEEDLQADLQGTRLLTALRKRSVERGRKVL
        NVQSTNWVQGP SLDEFKYGFPSGGLPSISNKWWGSSC DETNN  DDKHHFKVVNDG  S+IDQEKS SIEEDLQADLQGT LLTALRKRS+ERGRKVL
Subjt:  NVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEEDLQADLQGTRLLTALRKRSVERGRKVL

Query:  KHGNY
        KH  +
Subjt:  KHGNY

A0A6J1ERE4 uncharacterized protein LOC111437021 isoform X11.9e-7569.33Show/hide
Query:  DLSTAIPAAALVRVTASSRPPLLFLTPS---PNTSLCHFTGRCPVPYKQSLPIGIDQKIATITKNFNKPVVNKKMSKLNGAPQSLQQQLGNINTQMRRSQ
        DLST IPAAALVRV+        FL PS   PN    +F     +   Q  P  I Q             VN+KMSKLNG PQSLQ   GNIN Q+RR  
Subjt:  DLSTAIPAAALVRVTASSRPPLLFLTPS---PNTSLCHFTGRCPVPYKQSLPIGIDQKIATITKNFNKPVVNKKMSKLNGAPQSLQQQLGNINTQMRRSQ

Query:  NVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEEDLQADLQGTRLLTALRKRSVERGRKVL
        NVQSTNWVQGP SLDEFKYGFPSGGLPSISNKWWGSSC DETNN  DDKHHFKVVNDG  S+IDQEKS SIEEDLQADLQGT LLTALRKRS+ERGRKVL
Subjt:  NVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEEDLQADLQGTRLLTALRKRSVERGRKVL

Query:  KHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS
        KHGN  HG  LNKLSKKE+SLLLNIFRSS P+EW+NNS
Subjt:  KHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS

A0A6J1JJK7 uncharacterized protein LOC1114863891.6e-6682.04Show/hide
Query:  MSKLNGAPQSLQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEED
        MSKLNG PQSLQ   GNIN Q+RR  NVQSTNWVQGP SLDEFKYGFPSGGLPSISNKWWGSSC DETNN   DKHHFKVVNDG  S+IDQEKS SIEED
Subjt:  MSKLNGAPQSLQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEED

Query:  LQADLQGTRLLTALRKRSVERGRKVLKHGNYSHG---QSLNKLSKKEQSLLLNIFRSSTPNEWMNNS
        LQADLQGT LLTALRKRS+ERGRKVLKHGN  HG     LNKLSKKE+SLLLNIFRSS P+EW+NNS
Subjt:  LQADLQGTRLLTALRKRSVERGRKVLKHGNYSHG---QSLNKLSKKEQSLLLNIFRSSTPNEWMNNS

A0A7N2MCY2 RWP-RK domain-containing protein2.6e-2948.04Show/hide
Query:  NKKMSKLNGA--PQSLQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSS----CLDETNNG----EDDKHHFK--VVNDGF
        N  MSK  GA  P +LQQQ G+ N Q  RSQN+ ST+  +G  +LDEFKYGFPS GL + SNKWWGSS    C  +  +G    EDDKH  +  VV+   
Subjt:  NKKMSKLNGA--PQSLQQQLGNINTQMRRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSS----CLDETNNG----EDDKHHFK--VVNDGF

Query:  ISLIDQEKSESIEEDLQADLQGTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS
        + ++D+E+  + +ED     QGT LLT +RKR+VE GR+ LK G +  G  +NK+ K+E++LLL IF+SS P +W+N S
Subjt:  ISLIDQEKSESIEEDLQADLQGTRLLTALRKRSVERGRKVLKHGNYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G06500.1 unknown protein1.7e-1231.06Show/hide
Query:  STNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEEDLQADLQGTRLLTALRKRSVERGRKVLKHG
        +TN  +   ++DEFK+GFPSGGL ++SNKWWG +      +G  +        +G ++  D+ ++                L A+RKR  E GR+ ++ G
Subjt:  STNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEEDLQADLQGTRLLTALRKRSVERGRKVLKHG

Query:  NYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWM
         +  G    +  K++Q+LL  IF S+ P +W+
Subjt:  NYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWM

AT1G06500.2 unknown protein1.7e-1231.06Show/hide
Query:  STNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEEDLQADLQGTRLLTALRKRSVERGRKVLKHG
        +TN  +   ++DEFK+GFPSGGL ++SNKWWG +      +G  +        +G ++  D+ ++                L A+RKR  E GR+ ++ G
Subjt:  STNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEEDLQADLQGTRLLTALRKRSVERGRKVLKHG

Query:  NYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWM
         +  G    +  K++Q+LL  IF S+ P +W+
Subjt:  NYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWM

AT1G06500.3 unknown protein1.7e-1231.06Show/hide
Query:  STNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEEDLQADLQGTRLLTALRKRSVERGRKVLKHG
        +TN  +   ++DEFK+GFPSGGL ++SNKWWG +      +G  +        +G ++  D+ ++                L A+RKR  E GR+ ++ G
Subjt:  STNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEEDLQADLQGTRLLTALRKRSVERGRKVLKHG

Query:  NYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWM
         +  G    +  K++Q+LL  IF S+ P +W+
Subjt:  NYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWM

AT1G06500.4 unknown protein1.7e-1231.06Show/hide
Query:  STNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEEDLQADLQGTRLLTALRKRSVERGRKVLKHG
        +TN  +   ++DEFK+GFPSGGL ++SNKWWG +      +G  +        +G ++  D+ ++                L A+RKR  E GR+ ++ G
Subjt:  STNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEEDLQADLQGTRLLTALRKRSVERGRKVLKHG

Query:  NYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWM
         +  G    +  K++Q+LL  IF S+ P +W+
Subjt:  NYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGAGATTAAGCCGGAGGAGAAAGGAATTCTCCGTTGCCGTCCTACTGATCTCTCGACGGCGATACCAGCCGCCGCTTTGGTTAGGGTTACTGCTTCGTCCCGCCC
GCCACTTCTCTTCCTTACGCCATCGCCAAATACTTCCCTATGCCACTTTACTGGTCGCTGCCCAGTGCCCTACAAGCAAAGCCTTCCAATTGGCATAGATCAAAAGATTG
CTACCATTACAAAAAATTTTAACAAACCAGTTGTGAACAAAAAAATGTCCAAACTAAATGGCGCTCCTCAAAGCTTGCAGCAGCAGCTAGGAAACATCAACACACAGATG
AGGCGTTCTCAGAATGTTCAAAGCACAAATTGGGTGCAAGGACCACTGAGTTTGGACGAGTTCAAGTATGGATTCCCCTCTGGTGGATTACCATCTATATCAAATAAATG
GTGGGGAAGTAGCTGTCTAGATGAAACCAATAATGGAGAAGATGACAAACATCACTTCAAAGTAGTCAATGATGGTTTCATATCTTTAATAGACCAAGAGAAATCTGAAA
GTATAGAGGAGGATCTCCAAGCTGATCTTCAGGGGACGCGCCTTCTAACAGCTTTGAGAAAAAGAAGTGTGGAGAGAGGACGGAAAGTACTAAAGCATGGTAATTATTCT
CATGGCCAAAGTTTAAACAAGTTGAGCAAGAAAGAACAATCATTGCTTCTAAACATATTCAGATCATCAACTCCAAATGAATGGATGAATAACTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGTGAGATTAAGCCGGAGGAGAAAGGAATTCTCCGTTGCCGTCCTACTGATCTCTCGACGGCGATACCAGCCGCCGCTTTGGTTAGGGTTACTGCTTCGTCCCGCCC
GCCACTTCTCTTCCTTACGCCATCGCCAAATACTTCCCTATGCCACTTTACTGGTCGCTGCCCAGTGCCCTACAAGCAAAGCCTTCCAATTGGCATAGATCAAAAGATTG
CTACCATTACAAAAAATTTTAACAAACCAGTTGTGAACAAAAAAATGTCCAAACTAAATGGCGCTCCTCAAAGCTTGCAGCAGCAGCTAGGAAACATCAACACACAGATG
AGGCGTTCTCAGAATGTTCAAAGCACAAATTGGGTGCAAGGACCACTGAGTTTGGACGAGTTCAAGTATGGATTCCCCTCTGGTGGATTACCATCTATATCAAATAAATG
GTGGGGAAGTAGCTGTCTAGATGAAACCAATAATGGAGAAGATGACAAACATCACTTCAAAGTAGTCAATGATGGTTTCATATCTTTAATAGACCAAGAGAAATCTGAAA
GTATAGAGGAGGATCTCCAAGCTGATCTTCAGGGGACGCGCCTTCTAACAGCTTTGAGAAAAAGAAGTGTGGAGAGAGGACGGAAAGTACTAAAGCATGGTAATTATTCT
CATGGCCAAAGTTTAAACAAGTTGAGCAAGAAAGAACAATCATTGCTTCTAAACATATTCAGATCATCAACTCCAAATGAATGGATGAATAACTCCTAA
Protein sequenceShow/hide protein sequence
MCEIKPEEKGILRCRPTDLSTAIPAAALVRVTASSRPPLLFLTPSPNTSLCHFTGRCPVPYKQSLPIGIDQKIATITKNFNKPVVNKKMSKLNGAPQSLQQQLGNINTQM
RRSQNVQSTNWVQGPLSLDEFKYGFPSGGLPSISNKWWGSSCLDETNNGEDDKHHFKVVNDGFISLIDQEKSESIEEDLQADLQGTRLLTALRKRSVERGRKVLKHGNYS
HGQSLNKLSKKEQSLLLNIFRSSTPNEWMNNS