; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G016310 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G016310
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein ROOT PRIMORDIUM DEFECTIVE 1
Genome locationchr11:24646634..24651271
RNA-Seq ExpressionLsi11G016310
SyntenyLsi11G016310
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR021099 - Plant organelle RNA recognition domain
IPR045040 - PORR family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012049.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-25364Show/hide
Query:  GEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTM--------------------------------------------
        G++    KLFDKMPVRNPIS NSMIG YVRNGM KEALKLFVKMQEE IQ SEF+M                                            
Subjt:  GEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTM--------------------------------------------

Query:  --------------------------------------NLTVDMFSRAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNE-----
                                              NLTVDMFSRAGFLEEAEQ +KTMPI+ DAII G  ++ CR YGNTEM KRAAEKVNE     
Subjt:  --------------------------------------NLTVDMFSRAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNE-----

Query:  -----LDPEESMGYVLMVNVHTWRNNFVGAME-ERVAMRMKKVEKEPGGGLIEVDGEVHEFIASGAKSVVVPELFLVHSPLPAWSPSFVVTS---SSIQP
             LD E          +   +  F G +  + +A ++            +       F    A  + +    L+ S  P  SPSF+ +S   S+   
Subjt:  -----LDPEESMGYVLMVNVHTWRNNFVGAME-ERVAMRMKKVEKEPGGGLIEVDGEVHEFIASGAKSVVVPELFLVHSPLPAWSPSFVVTS---SSIQP

Query:  PVAVASKLVLSYLSRQSPSTPGVGPLHRSQQQHLIFQIHLRTYVDGTINFVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPM
        P       +L +L R  PST   GP H+ +QQ  +FQI LRTYVDGTI +VRDRGLDHAVEREKNLLPVMNIK+FIKSEPSKSVPVSIITQKREVLRIP 
Subjt:  PVAVASKLVLSYLSRQSPSTPGVGPLHRSQQQHLIFQIHLRTYVDGTINFVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPM

Query:  RPIDLIRKYPSIFEEFLPGGIGIQPHVRLTSKVLELDAEEQLTYQTETCRQQAADRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFK
        RPIDLIRKYP+IFEEFLPGGIGIQPHVRLTS+VLELDAEEQLTYQ+E CRQQAADR+V+LLMLSRVHKIP+SIIDQLKW+LGLPKDYVQSIVP+FPDYFK
Subjt:  RPIDLIRKYPSIFEEFLPGGIGIQPHVRLTSKVLELDAEEQLTYQTETCRQQAADRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFK

Query:  VVGHQNFASGSGDMRALELVCWNNELATSVLEKMAAKVKP-DTSKGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSV
        VVGHQNFASG G M+ALELVCW+NELATSVLEKMAAK KP  TSKG+H +TFPMK+SNGFEMDKKFKKWVDEWQKLPYISPYENA+HL PNSDESDKWSV
Subjt:  VVGHQNFASGSGDMRALELVCWNNELATSVLEKMAAKVKP-DTSKGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSV

Query:  AILHELLNMLVTKKTEKENVLCIGEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTVKEDSKTTNEHSGTR
        AILHE L+MLVTKKTEKE VL IGEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKE YKRGSVIESSPLM IRNKYLHLMNTVKEDSKTT+EH  TR
Subjt:  AILHELLNMLVTKKTEKENVLCIGEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTVKEDSKTTNEHSGTR

Query:  QQKQEQKEESDDGSGKQNEAELLNSSDDEDED----------EDENTRSHHNIRADRKDNGR-KRYVNFKENPARNRERSSMRMNKTAERPS--RDVKRE
        QQKQEQKE SDDGSGKQNEAEL N SDDEDED          EDEN  S+ NI+ADRK++GR KR+V+ KEN  R+R RSS R N +A+RPS  RD KRE
Subjt:  QQKQEQKEESDDGSGKQNEAELLNSSDDEDED----------EDENTRSHHNIRADRKDNGR-KRYVNFKENPARNRERSSMRMNKTAERPS--RDVKRE

Query:  RSSMSKRYPVRSKV
        RS+MSKR  VR+KV
Subjt:  RSSMSKRYPVRSKV

XP_022952527.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita moschata]5.4e-21583.98Show/hide
Query:  GPLHRSQQQHLIFQIHLRTYVDGTINFVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMRPIDLIRKYPSIFEEFLPGGIGI
        GP H+ +QQ  +FQI LRTYVDGTI +VRDRGLDHAVEREKNLLPVMNIK+FIKSEPSKSVPVSIITQKREVLRIP RPIDLIRKYP+IFEEFLPGGIGI
Subjt:  GPLHRSQQQHLIFQIHLRTYVDGTINFVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMRPIDLIRKYPSIFEEFLPGGIGI

Query:  QPHVRLTSKVLELDAEEQLTYQTETCRQQAADRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWN
        QPHVRLTS+VLELDAEEQLTYQ+E CRQQAADR+V+LLMLSRVHKIP+SIIDQLKW+LGLPKDYVQSIVP+FPDYFKVVGHQNFASG G M+ALELVCWN
Subjt:  QPHVRLTSKVLELDAEEQLTYQTETCRQQAADRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWN

Query:  NELATSVLEKMAAKVKP-DTSKGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCI
        NELATSVLEKMAAK KP  TSKGM  ITFPMK+SNGFEMDKKFKKWVDEWQKLPYISPY NA+HL PNSDESDKWSVAILHE L+MLVTKKTEKE VL I
Subjt:  NELATSVLEKMAAKVKP-DTSKGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCI

Query:  GEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTVKEDSKTTNEHSGTRQQKQEQKEESDDGSGKQNEAELL
        GEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKE YKRGSVIESSPLM IRNKYLHLMNTVKEDSKTT+EH  TRQQKQEQKE SDDGSGKQNEAEL 
Subjt:  GEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTVKEDSKTTNEHSGTRQQKQEQKEESDDGSGKQNEAELL

Query:  NSSDDEDED------EDENTRSHHNIRADRKDNGR-KRYVNFKENPARNRERSSMRMNKTAERPS--RDVKRERSSMSKRYPVRSKV
        N SDDEDED      EDEN  S+ NI+ADRK++GR KR+V+ KEN  R+R RSS R N +A+RPS  RD KRERS+MSKR  VR+KV
Subjt:  NSSDDEDED------EDENTRSHHNIRADRKDNGR-KRYVNFKENPARNRERSSMRMNKTAERPS--RDVKRERSSMSKRYPVRSKV

XP_023554109.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita pepo subsp. pepo]5.8e-21781.73Show/hide
Query:  GPLHRSQQQHLIFQIHLRTYVDGTINFVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMRPIDLIRKYPSIFEEFLPGGIGI
        GP H+ +QQ  +FQI LRTYVDGTI +VRDRGLDHAVEREKNLLPVMNIK+FIKSEPSKSVPVSIITQKREVLRIP RPIDLIRKYP+IFEEFLPGGIGI
Subjt:  GPLHRSQQQHLIFQIHLRTYVDGTINFVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMRPIDLIRKYPSIFEEFLPGGIGI

Query:  QPHVRLTSKVLELDAEEQLTYQTETCRQQAADRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWN
        QPHVRLTS+VLELDAEEQLTYQ+E CRQQAADR+V+LLMLSRVHKIP+SIIDQLKW+LGLPKDYVQSIVP+FPDYFKVVGHQNFASG G M+ALELVCW+
Subjt:  QPHVRLTSKVLELDAEEQLTYQTETCRQQAADRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWN

Query:  NELATSVLEKMAAKVKP-DTSKGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCI
        NELATSVLEKMAAK KP  TSKGMH +TFPMK+SNGFEMDKKFKKWVDEWQKLPYISPYENA+HL PNSDESDKWSVAILHE L+ML+TKKTEKE VL I
Subjt:  NELATSVLEKMAAKVKP-DTSKGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCI

Query:  GEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTVKEDSKTTNEHSGTRQQKQEQKEESDDGSGKQNEAELL
        GEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKE YKRGSVIESSPLM IRNKYLHLMNTVKED KTT+EH  TRQQKQEQKE SDDGSGKQNEAEL 
Subjt:  GEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTVKEDSKTTNEHSGTRQQKQEQKEESDDGSGKQNEAELL

Query:  NSSDDEDED--------EDENTRSHHNIRADRKDNG-RKRYVNFKENPARNRERSSMRMNKTAERPS-----------RDVKRERSSMSKRYPVRSKV
        NSSDDED++        EDE+  S+HNI+ADRK++G  KRYV+ KEN  R+R RSS R N +A+RPS           RD KRERS+MSKRY VR+KV
Subjt:  NSSDDEDED--------EDENTRSHHNIRADRKDNG-RKRYVNFKENPARNRERSSMRMNKTAERPS-----------RDVKRERSSMSKRYPVRSKV

XP_031741647.1 protein WHAT'S THIS FACTOR 9, mitochondrial, partial [Cucumis sativus]1.9e-21588.3Show/hide
Query:  QSPSTPGVGPLHRSQQQHLIFQIHLRTYVDGTINFVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMRPIDLIRKYPSIFEE
        +SPST   GPL R+Q Q  IFQIHLRTYVDGTIN+VRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVP+SIITQKRE+LRIP RPIDLIRKYPSIFEE
Subjt:  QSPSTPGVGPLHRSQQQHLIFQIHLRTYVDGTINFVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMRPIDLIRKYPSIFEE

Query:  FLPGGIGIQPHVRLTSKVLELDAEEQLTYQTETCRQQAADRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMR
        FLPGGIGIQPHV+LTSKVLELDAEEQLTYQT TCRQQAADR+V+LLMLSRVHK+PVSIIDQLKWDLGLPKDYV+SIVPDFPDYFKVVGHQNFASGSGDMR
Subjt:  FLPGGIGIQPHVRLTSKVLELDAEEQLTYQTETCRQQAADRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMR

Query:  ALELVCWNNELATSVLEKMAAKVKPDTSKGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTE
         LELVCWNNELATSV+EKMA KVKPD SKGM+ ITFPMK+SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKW+VAILHELL+MLVTKKTE
Subjt:  ALELVCWNNELATSVLEKMAAKVKPDTSKGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTE

Query:  KENVLCIGEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTVKEDSKTTNEHSGTRQQKQEQKEESDDGSGK
        KEN+LCIGEYFGLRSRFKRALLHHPGIFY+SSKAGTYTVVLKEGYKRGSV+ES+PLMNIRNKYLHLMNTV+EDSKTT +H  TRQQKQEQKEES+   G+
Subjt:  KENVLCIGEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTVKEDSKTTNEHSGTRQQKQEQKEESDDGSGK

Query:  QNEAELLNSSDDEDEDEDENTRSHHNIRADRKDNGR
        QNEAELLNSSD  DEDEDENT SH N+ AD++DN R
Subjt:  QNEAELLNSSDDEDEDEDENTRSHHNIRADRKDNGR

XP_038888019.1 protein WHAT'S THIS FACTOR 9, mitochondrial [Benincasa hispida]3.1e-22682.14Show/hide
Query:  GPLHRSQQQHLIFQIHLRTYVDGTINFVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMRPIDLIRKYPSIFEEFLPGGIGI
        GP HRSQQQH IFQIHLRTYVDGTIN+VRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQK+EVLRIP RPIDLIRKYPSIFEEFLPGGIGI
Subjt:  GPLHRSQQQHLIFQIHLRTYVDGTINFVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMRPIDLIRKYPSIFEEFLPGGIGI

Query:  QPHVRLTSKVLELDAEEQLTYQTETCRQQAADRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWN
        QPHVRLTSKVLELDAEEQLTYQTETCRQQAADR+VRLLMLSRVHK+PVSIIDQLKWDLGLPKDY+QSIVPDFPDYFKVVGHQNFA GS DMRALELVCWN
Subjt:  QPHVRLTSKVLELDAEEQLTYQTETCRQQAADRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWN

Query:  NELATSVLEKMAAKVKPDTSKGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCIG
        NELATSVLE MAAKVKPDTSKGMH ITFPMKFSNGFEMDKKFKKWVDEWQ LPYISPYENASHLSPNSDESDKW+ AILHELL+MLVTKKTEKEN+LCIG
Subjt:  NELATSVLEKMAAKVKPDTSKGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCIG

Query:  EYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTVKEDSKTTNEHSGTRQQKQEQKEESDDGSGKQNEAELLN
        EYFGLRSRFKRALLHHPGIFY+SSKAGTYTVVLKEGYKRGSVIE SPLMNIRNKYLHLMNTVKED KTT+EHSGTR QKQEQKE SDDG GKQNEAELLN
Subjt:  EYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTVKEDSKTTNEHSGTRQQKQEQKEESDDGSGKQNEAELLN

Query:  ------SSDDEDEDEDENTRSH----------------------------------------HNIRADRKDNGRKRYVNFKENPARNRERSSMRMNKTAE
                +DEDE+EDE+TRSH                                         N+RADR+DN RKR V+FKEN  RNR     RMN TAE
Subjt:  ------SSDDEDEDEDENTRSH----------------------------------------HNIRADRKDNGRKRYVNFKENPARNRERSSMRMNKTAE

Query:  RPSRDVKRERSSMSK
        RP RDVKRERS+M+K
Subjt:  RPSRDVKRERSSMSK

TrEMBL top hitse value%identityAlignment
A0A5A7UN72 Protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X17.2e-21388.71Show/hide
Query:  GPLHRSQQQHLIFQIHLRTYVDGTINFVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMRPIDLIRKYPSIFEEFLPGGIGI
        GPL R+QQQ  I QIHLRTYVDGTIN+VRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKRE+LRIPMRPIDLIRKYPSIFEEFLPGGIG+
Subjt:  GPLHRSQQQHLIFQIHLRTYVDGTINFVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMRPIDLIRKYPSIFEEFLPGGIGI

Query:  QPHVRLTSKVLELDAEEQLTYQTETCRQQAADRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWN
        QPHV+LTSKVLELDAEEQLTYQT TCRQQAADR+++LLMLSRVHK+PVSIIDQLKWDLGLPKD+VQSIVP+FPDYFKVVGHQNFASGSGDMR LELVCWN
Subjt:  QPHVRLTSKVLELDAEEQLTYQTETCRQQAADRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWN

Query:  NELATSVLEKMAAKVKPDTSKGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCIG
        NELATSVLEKMAAKVK DTSK MH ITFPMK+SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKW+VAILHELL+MLVTKKTEKEN+LCIG
Subjt:  NELATSVLEKMAAKVKPDTSKGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCIG

Query:  EYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTVKEDSKTTNEHSGTRQQKQEQKEE----SDDGSGKQNEA
        EYFGLRSRFKRALLHHPGIFY+SSKAGTYTVVLKEGYKRGSV+ES+PLMNIRNKYLHLMNTV+EDSKTT +H  TRQQKQEQK+E    SDD  G QNEA
Subjt:  EYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTVKEDSKTTNEHSGTRQQKQEQKEE----SDDGSGKQNEA

Query:  ELLNSSD--DEDEDEDENTRSHHNIRADRKDNGR
        ELLNSSD  DEDEDEDENT S H +RAD +DN R
Subjt:  ELLNSSD--DEDEDEDENTRSHHNIRADRKDNGR

A0A5D3CKY8 Protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X17.2e-21388.71Show/hide
Query:  GPLHRSQQQHLIFQIHLRTYVDGTINFVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMRPIDLIRKYPSIFEEFLPGGIGI
        GPL R+QQQ  I QIHLRTYVDGTIN+VRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKRE+LRIPMRPIDLIRKYPSIFEEFLPGGIG+
Subjt:  GPLHRSQQQHLIFQIHLRTYVDGTINFVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMRPIDLIRKYPSIFEEFLPGGIGI

Query:  QPHVRLTSKVLELDAEEQLTYQTETCRQQAADRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWN
        QPHV+LTSKVLELDAEEQLTYQT TCRQQAADR+++LLMLSRVHK+PVSIIDQLKWDLGLPKD+VQSIVP+FPDYFKVVGHQNFASGSGDMR LELVCWN
Subjt:  QPHVRLTSKVLELDAEEQLTYQTETCRQQAADRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWN

Query:  NELATSVLEKMAAKVKPDTSKGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCIG
        NELATSVLEKMAAKVK DTSK MH ITFPMK+SNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKW+VAILHELL+MLVTKKTEKEN+LCIG
Subjt:  NELATSVLEKMAAKVKPDTSKGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCIG

Query:  EYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTVKEDSKTTNEHSGTRQQKQEQKEE----SDDGSGKQNEA
        EYFGLRSRFKRALLHHPGIFY+SSKAGTYTVVLKEGYKRGSV+ES+PLMNIRNKYLHLMNTV+EDSKTT +H  TRQQKQEQK+E    SDD  G QNEA
Subjt:  EYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTVKEDSKTTNEHSGTRQQKQEQKEE----SDDGSGKQNEA

Query:  ELLNSSD--DEDEDEDENTRSHHNIRADRKDNGR
        ELLNSSD  DEDEDEDENT S H +RAD +DN R
Subjt:  ELLNSSD--DEDEDEDENTRSHHNIRADRKDNGR

A0A6J1GKN4 protein ROOT PRIMORDIUM DEFECTIVE 12.6e-21583.98Show/hide
Query:  GPLHRSQQQHLIFQIHLRTYVDGTINFVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMRPIDLIRKYPSIFEEFLPGGIGI
        GP H+ +QQ  +FQI LRTYVDGTI +VRDRGLDHAVEREKNLLPVMNIK+FIKSEPSKSVPVSIITQKREVLRIP RPIDLIRKYP+IFEEFLPGGIGI
Subjt:  GPLHRSQQQHLIFQIHLRTYVDGTINFVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMRPIDLIRKYPSIFEEFLPGGIGI

Query:  QPHVRLTSKVLELDAEEQLTYQTETCRQQAADRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWN
        QPHVRLTS+VLELDAEEQLTYQ+E CRQQAADR+V+LLMLSRVHKIP+SIIDQLKW+LGLPKDYVQSIVP+FPDYFKVVGHQNFASG G M+ALELVCWN
Subjt:  QPHVRLTSKVLELDAEEQLTYQTETCRQQAADRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWN

Query:  NELATSVLEKMAAKVKP-DTSKGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCI
        NELATSVLEKMAAK KP  TSKGM  ITFPMK+SNGFEMDKKFKKWVDEWQKLPYISPY NA+HL PNSDESDKWSVAILHE L+MLVTKKTEKE VL I
Subjt:  NELATSVLEKMAAKVKP-DTSKGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCI

Query:  GEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTVKEDSKTTNEHSGTRQQKQEQKEESDDGSGKQNEAELL
        GEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKE YKRGSVIESSPLM IRNKYLHLMNTVKEDSKTT+EH  TRQQKQEQKE SDDGSGKQNEAEL 
Subjt:  GEYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTVKEDSKTTNEHSGTRQQKQEQKEESDDGSGKQNEAELL

Query:  NSSDDEDED------EDENTRSHHNIRADRKDNGR-KRYVNFKENPARNRERSSMRMNKTAERPS--RDVKRERSSMSKRYPVRSKV
        N SDDEDED      EDEN  S+ NI+ADRK++GR KR+V+ KEN  R+R RSS R N +A+RPS  RD KRERS+MSKR  VR+KV
Subjt:  NSSDDEDED------EDENTRSHHNIRADRKDNGR-KRYVNFKENPARNRERSSMRMNKTAERPS--RDVKRERSSMSKRYPVRSKV

A0A6J1HW55 protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X35.5e-21382.62Show/hide
Query:  PLHRSQQQHLIFQIHLRTYVDGTINFVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMRPIDLIRKYPSIFEEFLPGGIGIQ
        P H+ +QQ  +FQI LRTY DGTI +VRDRGLDHAVEREKNLLPVMNIK+FIKSEPSKSVPVSIITQKREVLRIP RPIDLIRKYP+IFEEFLPGGIGIQ
Subjt:  PLHRSQQQHLIFQIHLRTYVDGTINFVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMRPIDLIRKYPSIFEEFLPGGIGIQ

Query:  PHVRLTSKVLELDAEEQLTYQTETCRQQAADRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWNN
        PHVRLTS+VLELDAEEQLT Q+E CRQQAADR+V+LLMLSRVHKIP+SIIDQLKW+LGLPKDYVQSIVP+FPDYFKVVGHQNFASG G  +ALELVCWNN
Subjt:  PHVRLTSKVLELDAEEQLTYQTETCRQQAADRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWNN

Query:  ELATSVLEKMAAKVKP-DTSKGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCIG
        ELATSVLEKMAAK KP  TSKGMH ITFPM +SNGFEMDKKFKKWVDEWQKLPYISPYE+A+HL P+SDESDKWSVAILHE L+MLVTKKTEKE VL IG
Subjt:  ELATSVLEKMAAKVKP-DTSKGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCIG

Query:  EYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTVKEDSKTT-NEHSGTRQQKQEQKEESDDGSGKQNEAELL
        EYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKE YKRGSVIESSPLM IRNKYLHLMNTVKEDSKTT +EH  TRQQKQEQKE SDDGSGKQNEAEL 
Subjt:  EYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTVKEDSKTT-NEHSGTRQQKQEQKEESDDGSGKQNEAELL

Query:  NSSDDEDEDED--------ENTRSHHNIRADRKDNGR-KRYVNFKENPARNRERSSMRMNKTAERPS--RDVKRERSSMSKRYPVRSKV
        NSS +EDEDED        E+  S+HNI+ADRK++GR KR+V+ KEN  R+R RSS R N +A+RPS  RD KRERS+MSKRY VR+KV
Subjt:  NSSDDEDEDED--------ENTRSHHNIRADRKDNGR-KRYVNFKENPARNRERSSMRMNKTAERPS--RDVKRERSSMSKRYPVRSKV

A0A6J1I0R6 protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X41.9e-21383.3Show/hide
Query:  PLHRSQQQHLIFQIHLRTYVDGTINFVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMRPIDLIRKYPSIFEEFLPGGIGIQ
        P H+ +QQ  +FQI LRTY DGTI +VRDRGLDHAVEREKNLLPVMNIK+FIKSEPSKSVPVSIITQKREVLRIP RPIDLIRKYP+IFEEFLPGGIGIQ
Subjt:  PLHRSQQQHLIFQIHLRTYVDGTINFVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMRPIDLIRKYPSIFEEFLPGGIGIQ

Query:  PHVRLTSKVLELDAEEQLTYQTETCRQQAADRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWNN
        PHVRLTS+VLELDAEEQLT Q+E CRQQAADR+V+LLMLSRVHKIP+SIIDQLKW+LGLPKDYVQSIVP+FPDYFKVVGHQNFASG G  +ALELVCWNN
Subjt:  PHVRLTSKVLELDAEEQLTYQTETCRQQAADRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWNN

Query:  ELATSVLEKMAAKVKP-DTSKGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCIG
        ELATSVLEKMAAK KP  TSKGMH ITFPM +SNGFEMDKKFKKWVDEWQKLPYISPYE+A+HL P+SDESDKWSVAILHE L+MLVTKKTEKE VL IG
Subjt:  ELATSVLEKMAAKVKP-DTSKGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCIG

Query:  EYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTVKEDSKTT-NEHSGTRQQKQEQKEESDDGSGKQNEAELL
        EYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKE YKRGSVIESSPLM IRNKYLHLMNTVKEDSKTT +EH  TRQQKQEQKE SDDGSGKQNEAEL 
Subjt:  EYFGLRSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTVKEDSKTT-NEHSGTRQQKQEQKEESDDGSGKQNEAELL

Query:  NSSDDEDEDED----ENTRSHHNIRADRKDNGR-KRYVNFKENPARNRERSSMRMNKTAERPS--RDVKRERSSMSKRYPVRSKV
        NSS +EDEDED    E+  S+HNI+ADRK++GR KR+V+ KEN  R+R RSS R N +A+RPS  RD KRERS+MSKRY VR+KV
Subjt:  NSSDDEDEDED----ENTRSHHNIRADRKDNGR-KRYVNFKENPARNRERSSMRMNKTAERPS--RDVKRERSSMSKRYPVRSKV

SwissProt top hitse value%identityAlignment
A0MFS5 Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic1.2e-2827.34Show/hide
Query:  DHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMRP--IDLIRKYPSIFEEFLPGGIGIQPHVRLTSKVLELDAEEQLTYQTETCRQQAA
        D  V+R+K L  V+NI+  + S+P + + +  + + R  L +  R   I L+RKYP +FE    G   ++   ++TS+       E+L       R +  
Subjt:  DHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMRP--IDLIRKYPSIFEEFLPGGIGIQPHVRLTSKVLELDAEEQLTYQTETCRQQAA

Query:  DRIV----RLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWNNELATSVLEKMAAKVKPDTSKGMHN--
        D +V    +L+M+S   +I +  I  LK DLGLP ++  +I   +P YF+VV      +  G   ALEL  W+ ELA S     AA++  D ++   +  
Subjt:  DRIV----RLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWNNELATSVLEKMAAKVKPDTSKGMHN--

Query:  ----ITFPMKFS-----NGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCIGEYFGLRSRFKRALLHH
            I  P KF+      G  + K   + + +++ + YISPY++ SHL   + E +K +  ++HELL++   K+T  +++    E F    + +  L+ H
Subjt:  ----ITFPMKFS-----NGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCIGEYFGLRSRFKRALLHH

Query:  PGIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTV---------KEDSKTTNEHSGTRQQKQEQKEESD--------------------
        P +FY+S K    +V L+E Y+   +I+  PL  ++ K   L++           K++     E  G+    +E++EESD                    
Subjt:  PGIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTV---------KEDSKTTNEHSGTRQQKQEQKEESD--------------------

Query:  --DGSGKQNEAELLNSSDDEDEDEDENT
          D +  + E ++  + DD+DEDE+E++
Subjt:  --DGSGKQNEAELLNSSDDEDEDEDENT

Q65XL5 Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic1.2e-2827.88Show/hide
Query:  DHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRI--PMRPIDLIRKYPSIFEEFLPGGIGIQPHVRLTSKVLELDAEEQLTYQTETCRQQAA
        D+ ++R+K L  V+ +++ + S P + + +  + + R  L +    R I L++++P +FE    G   ++  +   ++ L LD E  L  ++E     A 
Subjt:  DHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRI--PMRPIDLIRKYPSIFEEFLPGGIGIQPHVRLTSKVLELDAEEQLTYQTETCRQQAA

Query:  DRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWNNELATSVLEKMAAKVKPDTSKGMHN------
         ++ +LLM+S+  +I +  I  LK DLGLP ++  +I   +P YF+VV       G G    LEL  W+ ELA S     AA+V  + ++          
Subjt:  DRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWNNELATSVLEKMAAKVKPDTSKGMHN------

Query:  ITFPMKFS-----NGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCIGEYFGLRSRFKRALLHHPGIF
        I  P+KF+      G ++ +   + V +++++PYISPY + SHL   S E +K +  ++HE+L++ + K+T  +++    E F      +  L+ HP +F
Subjt:  ITFPMKFS-----NGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCIGEYFGLRSRFKRALLHHPGIF

Query:  YLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTVKEDSKTTNEHSGTRQQKQEQKEESDDGSGKQNEAELLNSSDDEDEDEDE
        Y+S K    +V L+E YK   ++E S L+ ++ K   L+   +            R+      EE+D  +G    A++L+   D ++DEDE
Subjt:  YLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTVKEDSKTTNEHSGTRQQKQEQKEESDDGSGKQNEAELLNSSDDEDEDEDE

Q689D6 Protein ROOT PRIMORDIUM DEFECTIVE 11.0e-3028.37Show/hide
Query:  VRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMR---PIDLIRKYPSIFEEFLPGGIGIQPHVRLTSKVLELDAEEQLTYQTE
        VRD G D+ +E EK +  V+     I S+P+ ++ +S++      L +  +   P   + K+P +FE      I   P  R+    L   A +Q+ ++ E
Subjt:  VRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMR---PIDLIRKYPSIFEEFLPGGIGIQPHVRLTSKVLELDAEEQLTYQTE

Query:  TCRQQAADRIVR---LLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWNNELATSVLEKMAAKVKPDTSK
            Q  D + R   L+M+S   +I +  +   + + GLP+D+  S++   P +F+++  +         + +E+V  +  L+   +E++  +     +K
Subjt:  TCRQQAADRIVR---LLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWNNELATSVLEKMAAKVKPDTSK

Query:  GMH----NITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDES----DKWSVAILHELLNMLVTKKTEKENVLCIGEYFGLRSRFKRAL
        G+       +F + F  GF++ K F+  V +WQ+LPY SPYE+ S     S E+    +K SVA +HELL++ V KK   E +        L  + K  L
Subjt:  GMH----NITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDES----DKWSVAILHELLNMLVTKKTEKENVLCIGEYFGLRSRFKRAL

Query:  LHHPGIFYLSSKAG---TYTVVLKEGYKRGSVIESSPLMNIRNKYLHLM
        L H GIFY+S++      +TV L+EGYKRG ++E + +   R +   L+
Subjt:  LHHPGIFYLSSKAG---TYTVVLKEGYKRGSVIESSPLMNIRNKYLHLM

Q9SJG6 Pentatricopeptide repeat-containing protein At2g42920, chloroplastic9.8e-3430.84Show/hide
Query:  DVVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTM-----------------------------
        DVVAWN MI+G AKCG ID+++ LFD+MP RN +S NSMI  +VRNG  K+AL +F +MQE+ ++   FTM                             
Subjt:  DVVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTM-----------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------NLTVDMFSRAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAMRMK
                 L V++   AG LEEAE  IK MP+E D +IW  LLSACR  GN EMAKRAA+ + +LDP+E+ GYVL+ N +     F  A+E+R+ M+ +
Subjt:  --------NLTVDMFSRAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAMRMK

Query:  KVEKEPGGGLIEVDGEVHEFIASGAKSVVVPELF
        ++EKE G   IEVD EVHEFI+ G       E++
Subjt:  KVEKEPGGGLIEVDGEVHEFIASGAKSVVVPELF

Q9ZUZ6 Protein WHAT'S THIS FACTOR 9, mitochondrial1.4e-5134.31Show/hide
Query:  RTYVDGTINFVRDRGLDHA--VEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMRPIDLIRKYPSIFEEFLPGGIGIQPHVRLTSKVLELDA
        RTYVD  + + RD   D+   + R   L  V+++K+ I  EP++ +P+S I++K     +  +    +RK+PSIFEEF+     + P  RLT +  ELD 
Subjt:  RTYVDGTINFVRDRGLDHA--VEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMRPIDLIRKYPSIFEEFLPGGIGIQPHVRLTSKVLELDA

Query:  EEQLTYQTETCRQQAADRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWNNELATSVLEKMAAKV
        +E++ YQT        DR+ +L+++S+ + +P+SI+  +KW LGLP DY+Q     FPD   +     F      ++ L +     +   SVL+K A K 
Subjt:  EEQLTYQTETCRQQAADRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWNNELATSVLEKMAAKV

Query:  KPDTSKGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCIGEYFGLRSRFKRALLH
        K      +  I FP+  S G  +  K + W+ E+QKLPY+SPY++ S L P+SD ++K  V  LHELL + V    E++ +LC+ ++FGL  +  +A   
Subjt:  KPDTSKGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCIGEYFGLRSRFKRALLH

Query:  HPGIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTVKEDSKTTNEHSGTRQQKQEQKEESDDGSG
        HP IFYLS K  T T +L+E Y+  + +E+ P++ +R KY+ LM   +   K+     G R +    K+   D  G
Subjt:  HPGIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTVKEDSKTTNEHSGTRQQKQEQKEESDDGSG

Arabidopsis top hitse value%identityAlignment
AT1G71850.1 Ubiquitin carboxyl-terminal hydrolase family protein1.9e-12553.35Show/hide
Query:  VDGTINFVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMRPIDLIRKYPSIFEEFLPGGIGIQPHVRLTSKVLELDAEEQLT
        V+ T  FVRDRGLDHAVEREKNL P+++IKD I+SEP+KSVP+S+IT +++ LR+P+RPI+ IR +PS+F+EFLPGGIGI PH+ LT ++L  DA+EQL 
Subjt:  VDGTINFVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMRPIDLIRKYPSIFEEFLPGGIGIQPHVRLTSKVLELDAEEQLT

Query:  YQTETCRQQAADRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWNNELATSVLEKMAAKVKPDTS
        Y +ET +Q  ADR+++LLM++R++KIP+ I+D LKWDLGLPKDYV+++VP+FPDYF+V+        SG+   LELVCW+NE A SVLEK A  ++    
Subjt:  YQTETCRQQAADRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWNNELATSVLEKMAAKVKPDTS

Query:  KGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCIGEYFGLRSRFKRALLHHPGIF
             I FPMKFSNGF +DKK KKW+D+WQKLPYISPYENA HLS  SDESDKW+ A+LHE++N+ V+KK EK+ +L +GE+ GLRSRFKR L +HPGIF
Subjt:  KGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCIGEYFGLRSRFKRALLHHPGIF

Query:  YLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTVKEDSKTTNEHSGTRQQKQ--------EQKEESDDGSGKQNEAELLNSSDDEDEDEDEN
        YLSSK  T+TVVL++GYKRG +IES+ L+  RN+Y+ LMNTVK+D+K  +  S    + +        + K E+DD SG   E +      D+DED+DE 
Subjt:  YLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTVKEDSKTTNEHSGTRQQKQ--------EQKEESDDGSGKQNEAELLNSSDDEDEDEDEN

Query:  TRSHHNIRADRKDNGRKRYVNFKENPARNR--ERSSMRMNKTAERPSR
         ++    R  R  + R    +F  + +R++   R S    KT ++ SR
Subjt:  TRSHHNIRADRKDNGRKRYVNFKENPARNR--ERSSMRMNKTAERPSR

AT2G39120.1 Ubiquitin carboxyl-terminal hydrolase family protein9.7e-5334.31Show/hide
Query:  RTYVDGTINFVRDRGLDHA--VEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMRPIDLIRKYPSIFEEFLPGGIGIQPHVRLTSKVLELDA
        RTYVD  + + RD   D+   + R   L  V+++K+ I  EP++ +P+S I++K     +  +    +RK+PSIFEEF+     + P  RLT +  ELD 
Subjt:  RTYVDGTINFVRDRGLDHA--VEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMRPIDLIRKYPSIFEEFLPGGIGIQPHVRLTSKVLELDA

Query:  EEQLTYQTETCRQQAADRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWNNELATSVLEKMAAKV
        +E++ YQT        DR+ +L+++S+ + +P+SI+  +KW LGLP DY+Q     FPD   +     F      ++ L +     +   SVL+K A K 
Subjt:  EEQLTYQTETCRQQAADRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWNNELATSVLEKMAAKV

Query:  KPDTSKGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCIGEYFGLRSRFKRALLH
        K      +  I FP+  S G  +  K + W+ E+QKLPY+SPY++ S L P+SD ++K  V  LHELL + V    E++ +LC+ ++FGL  +  +A   
Subjt:  KPDTSKGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCIGEYFGLRSRFKRALLH

Query:  HPGIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTVKEDSKTTNEHSGTRQQKQEQKEESDDGSG
        HP IFYLS K  T T +L+E Y+  + +E+ P++ +R KY+ LM   +   K+     G R +    K+   D  G
Subjt:  HPGIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTVKEDSKTTNEHSGTRQQKQEQKEESDDGSG

AT3G58520.1 Ubiquitin carboxyl-terminal hydrolase family protein5.5e-5632.14Show/hide
Query:  INFVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMRPIDLIRKYPSIFEEFLPGGIGIQPHVRLTSKVLELDAEEQLTYQTE
        + +V+++ LDH ++ E +L     +KD IK  P+  +    +   +++L + +  +  +R+YP++F EF        P  +LT   L LD++E++ +Q+ 
Subjt:  INFVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMRPIDLIRKYPSIFEEFLPGGIGIQPHVRLTSKVLELDAEEQLTYQTE

Query:  TCRQQAADRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWNNELATSVLEKMAA--KVKPDTS--
               +R+ R+LM+ R   + +  +  LK+DLGLP +Y +++V  +PD+F       F   S     L+LV W +E A S L+K      V  + S  
Subjt:  TCRQQAADRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWNNELATSVLEKMAA--KVKPDTS--

Query:  ----KGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCIGEYFGLRSRFKRALLHH
            +G   +TFPM F  G+   KK K W+DE+QKLPYISPY++ S++ P SD  +K +VA+LHELL++ + KKT++  +  +     +  +F R    +
Subjt:  ----KGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCIGEYFGLRSRFKRALLHH

Query:  PGIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNT-----------VKEDSKTTNEHSGTRQQKQEQKEESDDGSGKQNEAE
        PGIFYLS K  T TV+LKEGY+RG +++  PL  +R+K+ H+M T           V ++    +      +++  ++EE  +GS  + ++E
Subjt:  PGIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNT-----------VKEDSKTTNEHSGTRQQKQEQKEESDDGSGKQNEAE

AT4G24320.1 Ubiquitin carboxyl-terminal hydrolase family protein1.6e-7941.1Show/hide
Query:  RTYVDGTINFVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMRPIDLIRKYPSIFEEFLPGGIGIQPHVRLTSKVLELDAEE
        RT+V+  + +V D  LD AV+REKNL  V+++KD I S PSKS+P+S ++  + ++ + +      +KYPS+F  F P       HVRLT + L L  EE
Subjt:  RTYVDGTINFVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMRPIDLIRKYPSIFEEFLPGGIGIQPHVRLTSKVLELDAEE

Query:  QLTYQTETCRQQAADRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWNNELATSVLEKMAAKVKP
        +  + +   R     R+ + LML+    +P+ ++D+ ++DLGLP+DY+ S++ D+P+YF+V   ++  +G   + AL +    N L  S +E+  A +  
Subjt:  QLTYQTETCRQQAADRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWNNELATSVLEKMAAKVKP

Query:  DTSKGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCIGEYFGLRSRFKRALLHHP
           K    I + M F  G+E+ K+ K WV++WQ LPYISPYENA HL   SD+++KW+VA+LHELL +LV+KKTE +NV+C+GEY G   RFK+AL+HHP
Subjt:  DTSKGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCIGEYFGLRSRFKRALLHHP

Query:  GIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTVKEDSKTTNEHSGTRQQKQEQ
        GIFY+S K  T TVVL+E Y +  ++E  PLM IR++Y++LM+      K    H   R  ++++
Subjt:  GIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTVKEDSKTTNEHSGTRQQKQEQ

AT5G48040.1 Ubiquitin carboxyl-terminal hydrolase family protein7.2e-5636.49Show/hide
Query:  VDGTINFVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIP--MRPIDLIRKYPSIFEEFL---PGGIGIQPHVRLTSKVLELDA
        V+  + +V+DR LD  V REK+L  V N+   I + P   +P+  +   R  L +P  ++    IR+YP+IF E       G  + P   LT + ++L  
Subjt:  VDGTINFVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIP--MRPIDLIRKYPSIFEEFL---PGGIGIQPHVRLTSKVLELDA

Query:  EEQLTYQTETCRQQAAD---RIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWNNELATSVLEKMA
        EE      +  R    D   R+ +LLML+    + +  ID L+WDLGLP DY  S++   PD F +V        S D+  L+L+ W+  LA S ++   
Subjt:  EEQLTYQTETCRQQAAD---RIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALELVCWNNELATSVLEKMA

Query:  AKVKPDTSKGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCIGEYFGLRSRFKRA
          ++ D       + FP+KF+ GF + +K  +W+ EWQ+LPY SPY +ASHL P +D S+K +V + HELL++ + KKTE++NV  + + F L  +F + 
Subjt:  AKVKPDTSKGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCIGEYFGLRSRFKRA

Query:  LLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMN
           HPGIFY+S K  T TV+L+E Y R  +IE  PL+ +R K+ ++MN
Subjt:  LLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTTGATGTCGTTGCCTGGAATTTCATGATTCTGGGTCCGGCTAAATGTGGGGAAATTGATGAGTCGAGAAAGCTGTTCGATAAAATGCCTGTTAGAAATCCAAT
CTCTCGGAATTCTATGATTGGTGTGTATGTTAGAAATGGGATGTCCAAAGAAGCTCTGAAGCTGTTTGTCAAAATGCAGGAAGAGAGAATCCAGTCTAGTGAGTTTACTA
TGAATTTAACAGTGGACATGTTCAGCCGAGCTGGGTTTCTTGAAGAAGCAGAGCAGTTCATAAAAACGATGCCGATTGAGGGAGATGCAATCATATGGGGGTGCTTGCTC
TCAGCTTGTAGAATATATGGGAACACAGAAATGGCAAAGAGGGCAGCAGAGAAAGTTAATGAATTGGATCCAGAAGAAAGCATGGGTTATGTTCTAATGGTGAATGTTCA
TACTTGGAGGAATAACTTTGTGGGAGCAATGGAGGAAAGGGTTGCAATGAGGATGAAGAAGGTGGAGAAAGAACCAGGGGGCGGTCTGATTGAAGTTGATGGTGAAGTTC
ATGAGTTCATAGCGAGTGGCGCCAAATCAGTCGTTGTGCCAGAGCTCTTCCTCGTTCATTCTCCTCTGCCCGCCTGGTCACCGTCGTTCGTCGTTACCTCTTCGTCCATT
CAGCCGCCAGTCGCCGTTGCCTCAAAACTTGTACTCTCCTACCTCAGCCGACAGTCGCCGTCCACACCCGGCGTCGGACCTCTCCATCGGTCCCAACAGCAACACCTCAT
TTTCCAGATACACCTTCGAACATATGTAGACGGCACAATTAATTTTGTTCGAGATCGTGGTCTTGATCATGCTGTTGAGAGAGAGAAGAACCTTCTTCCAGTGATGAATA
TAAAAGATTTTATAAAATCAGAGCCGTCCAAGTCTGTTCCAGTTTCCATCATAACTCAGAAGAGGGAAGTTCTAAGAATTCCAATGCGTCCTATTGATTTGATCAGAAAA
TATCCCTCCATTTTTGAAGAATTTCTTCCTGGAGGCATTGGGATTCAACCTCATGTCCGGCTAACCTCTAAAGTCCTTGAACTTGATGCTGAAGAGCAGCTAACGTATCA
AACTGAAACATGTAGACAACAAGCTGCAGATCGAATTGTGAGGCTCTTAATGCTATCAAGAGTCCATAAAATACCTGTAAGTATCATTGATCAATTGAAATGGGACCTGG
GTCTTCCTAAAGATTATGTTCAAAGTATAGTTCCTGATTTTCCAGATTACTTCAAAGTTGTAGGACACCAAAATTTTGCATCTGGATCAGGTGATATGCGGGCATTGGAA
TTGGTATGTTGGAACAATGAATTGGCCACTTCAGTTTTAGAGAAGATGGCTGCAAAAGTAAAGCCTGATACATCGAAGGGAATGCATAATATTACTTTTCCTATGAAATT
CTCGAATGGGTTTGAGATGGATAAGAAGTTCAAGAAGTGGGTGGATGAGTGGCAAAAGCTACCTTACATTTCTCCCTATGAAAATGCATCACATCTTTCTCCTAACAGTG
ATGAATCTGATAAGTGGTCTGTTGCGATTTTACACGAGCTTCTTAATATGCTTGTCACGAAGAAGACTGAGAAGGAAAATGTATTATGCATAGGTGAGTACTTTGGTCTA
CGGTCAAGGTTTAAGAGAGCCTTACTTCACCATCCAGGGATATTCTACCTATCGAGTAAGGCTGGAACCTATACAGTTGTCTTGAAAGAAGGATATAAAAGGGGTTCCGT
GATTGAGAGTAGCCCTTTGATGAACATTAGAAACAAGTACCTTCACCTTATGAACACAGTGAAGGAAGACAGTAAAACAACAAACGAGCATAGTGGCACTCGCCAACAGA
AGCAAGAACAGAAAGAAGAGTCAGATGATGGATCTGGGAAACAGAATGAAGCTGAATTACTCAACTCCTCGGATGATGAAGATGAAGATGAAGATGAAAATACTCGTAGT
CATCATAACATTCGTGCTGATCGAAAAGATAATGGGCGTAAAAGATATGTTAATTTCAAAGAAAATCCTGCTAGAAACAGGGAGAGATCATCAATGAGAATGAACAAGAC
TGCGGAAAGACCTTCTAGGGATGTTAAAAGAGAGAGGTCAAGTATGAGTAAGAGATACCCAGTGAGGTCGAAGGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAACTTGATGTCGTTGCCTGGAATTTCATGATTCTGGGTCCGGCTAAATGTGGGGAAATTGATGAGTCGAGAAAGCTGTTCGATAAAATGCCTGTTAGAAATCCAAT
CTCTCGGAATTCTATGATTGGTGTGTATGTTAGAAATGGGATGTCCAAAGAAGCTCTGAAGCTGTTTGTCAAAATGCAGGAAGAGAGAATCCAGTCTAGTGAGTTTACTA
TGAATTTAACAGTGGACATGTTCAGCCGAGCTGGGTTTCTTGAAGAAGCAGAGCAGTTCATAAAAACGATGCCGATTGAGGGAGATGCAATCATATGGGGGTGCTTGCTC
TCAGCTTGTAGAATATATGGGAACACAGAAATGGCAAAGAGGGCAGCAGAGAAAGTTAATGAATTGGATCCAGAAGAAAGCATGGGTTATGTTCTAATGGTGAATGTTCA
TACTTGGAGGAATAACTTTGTGGGAGCAATGGAGGAAAGGGTTGCAATGAGGATGAAGAAGGTGGAGAAAGAACCAGGGGGCGGTCTGATTGAAGTTGATGGTGAAGTTC
ATGAGTTCATAGCGAGTGGCGCCAAATCAGTCGTTGTGCCAGAGCTCTTCCTCGTTCATTCTCCTCTGCCCGCCTGGTCACCGTCGTTCGTCGTTACCTCTTCGTCCATT
CAGCCGCCAGTCGCCGTTGCCTCAAAACTTGTACTCTCCTACCTCAGCCGACAGTCGCCGTCCACACCCGGCGTCGGACCTCTCCATCGGTCCCAACAGCAACACCTCAT
TTTCCAGATACACCTTCGAACATATGTAGACGGCACAATTAATTTTGTTCGAGATCGTGGTCTTGATCATGCTGTTGAGAGAGAGAAGAACCTTCTTCCAGTGATGAATA
TAAAAGATTTTATAAAATCAGAGCCGTCCAAGTCTGTTCCAGTTTCCATCATAACTCAGAAGAGGGAAGTTCTAAGAATTCCAATGCGTCCTATTGATTTGATCAGAAAA
TATCCCTCCATTTTTGAAGAATTTCTTCCTGGAGGCATTGGGATTCAACCTCATGTCCGGCTAACCTCTAAAGTCCTTGAACTTGATGCTGAAGAGCAGCTAACGTATCA
AACTGAAACATGTAGACAACAAGCTGCAGATCGAATTGTGAGGCTCTTAATGCTATCAAGAGTCCATAAAATACCTGTAAGTATCATTGATCAATTGAAATGGGACCTGG
GTCTTCCTAAAGATTATGTTCAAAGTATAGTTCCTGATTTTCCAGATTACTTCAAAGTTGTAGGACACCAAAATTTTGCATCTGGATCAGGTGATATGCGGGCATTGGAA
TTGGTATGTTGGAACAATGAATTGGCCACTTCAGTTTTAGAGAAGATGGCTGCAAAAGTAAAGCCTGATACATCGAAGGGAATGCATAATATTACTTTTCCTATGAAATT
CTCGAATGGGTTTGAGATGGATAAGAAGTTCAAGAAGTGGGTGGATGAGTGGCAAAAGCTACCTTACATTTCTCCCTATGAAAATGCATCACATCTTTCTCCTAACAGTG
ATGAATCTGATAAGTGGTCTGTTGCGATTTTACACGAGCTTCTTAATATGCTTGTCACGAAGAAGACTGAGAAGGAAAATGTATTATGCATAGGTGAGTACTTTGGTCTA
CGGTCAAGGTTTAAGAGAGCCTTACTTCACCATCCAGGGATATTCTACCTATCGAGTAAGGCTGGAACCTATACAGTTGTCTTGAAAGAAGGATATAAAAGGGGTTCCGT
GATTGAGAGTAGCCCTTTGATGAACATTAGAAACAAGTACCTTCACCTTATGAACACAGTGAAGGAAGACAGTAAAACAACAAACGAGCATAGTGGCACTCGCCAACAGA
AGCAAGAACAGAAAGAAGAGTCAGATGATGGATCTGGGAAACAGAATGAAGCTGAATTACTCAACTCCTCGGATGATGAAGATGAAGATGAAGATGAAAATACTCGTAGT
CATCATAACATTCGTGCTGATCGAAAAGATAATGGGCGTAAAAGATATGTTAATTTCAAAGAAAATCCTGCTAGAAACAGGGAGAGATCATCAATGAGAATGAACAAGAC
TGCGGAAAGACCTTCTAGGGATGTTAAAAGAGAGAGGTCAAGTATGAGTAAGAGATACCCAGTGAGGTCGAAGGTTTAG
Protein sequenceShow/hide protein sequence
MELDVVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTMNLTVDMFSRAGFLEEAEQFIKTMPIEGDAIIWGCLL
SACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAMRMKKVEKEPGGGLIEVDGEVHEFIASGAKSVVVPELFLVHSPLPAWSPSFVVTSSSI
QPPVAVASKLVLSYLSRQSPSTPGVGPLHRSQQQHLIFQIHLRTYVDGTINFVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPMRPIDLIRK
YPSIFEEFLPGGIGIQPHVRLTSKVLELDAEEQLTYQTETCRQQAADRIVRLLMLSRVHKIPVSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDMRALE
LVCWNNELATSVLEKMAAKVKPDTSKGMHNITFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPNSDESDKWSVAILHELLNMLVTKKTEKENVLCIGEYFGL
RSRFKRALLHHPGIFYLSSKAGTYTVVLKEGYKRGSVIESSPLMNIRNKYLHLMNTVKEDSKTTNEHSGTRQQKQEQKEESDDGSGKQNEAELLNSSDDEDEDEDENTRS
HHNIRADRKDNGRKRYVNFKENPARNRERSSMRMNKTAERPSRDVKRERSSMSKRYPVRSKV