; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G016380 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G016380
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptiontranscription factor PAR2-like
Genome locationchr11:24713517..24713894
RNA-Seq ExpressionLsi11G016380
SyntenyLsi11G016380
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR044549 - Transcription factor IBH1-like, bHLH domain
IPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140253.1 transcription factor PAR2 [Cucumis sativus]7.3e-5189.6Show/hide
Query:  MDKPQIQTLKQTTTSRQKTLILNALHKSSPHRRRSRRRVSTTRIAEKIHRNDAVYASEEADEKEAIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
        MDKPQ QTLK TTTSRQKTLILNALHKSS HRRRSRRRV T+RIA+KIHRN  V+ SEE DEKEA+ERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
Subjt:  MDKPQIQTLKQTTTSRQKTLILNALHKSSPHRRRSRRRVSTTRIAEKIHRNDAVYASEEADEKEAIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ

Query:  HQVKAMRALSSFFESLEKEKSKCGG
        HQVKAMRALSSFFESLEKEKS+CGG
Subjt:  HQVKAMRALSSFFESLEKEKSKCGG

XP_008449537.1 PREDICTED: transcription factor PAR2-like [Cucumis melo]2.4e-4988.89Show/hide
Query:  MDKPQIQTLKQTTTSRQKTLILNALHKSSPHRRRSRRRVSTTR-IAEKIHRNDAVYASEEADEKEAIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL
        MDKPQ QTLK TTTSRQKTLILNALHKSS HRRRSRRRV T+R IA+KIHRN  V+  EEADEKEA+ERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL
Subjt:  MDKPQIQTLKQTTTSRQKTLILNALHKSSPHRRRSRRRVSTTR-IAEKIHRNDAVYASEEADEKEAIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL

Query:  QHQVKAMRALSSFFESLEKEKSKCGG
        QHQVKAMRALSSFFESLEKEKS+CGG
Subjt:  QHQVKAMRALSSFFESLEKEKSKCGG

XP_022968919.1 transcription factor PAR2-like [Cucurbita maxima]2.4e-3876Show/hide
Query:  MDKPQIQTLKQTTTSRQKTLILNALHKSSPHRRRSRRRVSTTRIAEKIHRNDAVYASEEADEKEAIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
        MDKPQ QTL  TT SRQK            HRRRSRR+V  T  A+KIHRN AV+AS E DEKE +ERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
Subjt:  MDKPQIQTLKQTTTSRQKTLILNALHKSSPHRRRSRRRVSTTRIAEKIHRNDAVYASEEADEKEAIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ

Query:  HQVKAMRALSSFFESLEKEKSKCGG
        HQVKAMRALS+FFESLEKEKS+CGG
Subjt:  HQVKAMRALSSFFESLEKEKSKCGG

XP_023554716.1 transcription factor PAR2-like [Cucurbita pepo subsp. pepo]4.9e-3976.8Show/hide
Query:  MDKPQIQTLKQTTTSRQKTLILNALHKSSPHRRRSRRRVSTTRIAEKIHRNDAVYASEEADEKEAIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
        MDKPQ QTL  TT SRQK            HRRRSRR+V  T   +KIHRN AV+ASEE DEKE +ERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
Subjt:  MDKPQIQTLKQTTTSRQKTLILNALHKSSPHRRRSRRRVSTTRIAEKIHRNDAVYASEEADEKEAIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ

Query:  HQVKAMRALSSFFESLEKEKSKCGG
        HQVKAMRALSSFFESLEKEKS+CGG
Subjt:  HQVKAMRALSSFFESLEKEKSKCGG

XP_038887982.1 transcription factor PAR1-like [Benincasa hispida]7.8e-5394.4Show/hide
Query:  MDKPQIQTLKQTTTSRQKTLILNALHKSSPHRRRSRRRVSTTRIAEKIHRNDAVYASEEADEKEAIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
        MDK QIQTLK TTTSRQKTLILNALHKSS  RRRSRRRV TTRIAEKIHRNDAVYASEEADEKEA+ERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
Subjt:  MDKPQIQTLKQTTTSRQKTLILNALHKSSPHRRRSRRRVSTTRIAEKIHRNDAVYASEEADEKEAIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ

Query:  HQVKAMRALSSFFESLEKEKSKCGG
        HQVKAMRALSSFFESLEKEKS+CGG
Subjt:  HQVKAMRALSSFFESLEKEKSKCGG

TrEMBL top hitse value%identityAlignment
A0A0A0KGU6 Uncharacterized protein3.5e-5189.6Show/hide
Query:  MDKPQIQTLKQTTTSRQKTLILNALHKSSPHRRRSRRRVSTTRIAEKIHRNDAVYASEEADEKEAIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
        MDKPQ QTLK TTTSRQKTLILNALHKSS HRRRSRRRV T+RIA+KIHRN  V+ SEE DEKEA+ERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
Subjt:  MDKPQIQTLKQTTTSRQKTLILNALHKSSPHRRRSRRRVSTTRIAEKIHRNDAVYASEEADEKEAIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ

Query:  HQVKAMRALSSFFESLEKEKSKCGG
        HQVKAMRALSSFFESLEKEKS+CGG
Subjt:  HQVKAMRALSSFFESLEKEKSKCGG

A0A1S3BM86 transcription factor PAR2-like1.1e-4988.89Show/hide
Query:  MDKPQIQTLKQTTTSRQKTLILNALHKSSPHRRRSRRRVSTTR-IAEKIHRNDAVYASEEADEKEAIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL
        MDKPQ QTLK TTTSRQKTLILNALHKSS HRRRSRRRV T+R IA+KIHRN  V+  EEADEKEA+ERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL
Subjt:  MDKPQIQTLKQTTTSRQKTLILNALHKSSPHRRRSRRRVSTTR-IAEKIHRNDAVYASEEADEKEAIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL

Query:  QHQVKAMRALSSFFESLEKEKSKCGG
        QHQVKAMRALSSFFESLEKEKS+CGG
Subjt:  QHQVKAMRALSSFFESLEKEKSKCGG

A0A5A7V5C4 Transcription factor PAR2-like1.1e-4988.89Show/hide
Query:  MDKPQIQTLKQTTTSRQKTLILNALHKSSPHRRRSRRRVSTTR-IAEKIHRNDAVYASEEADEKEAIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL
        MDKPQ QTLK TTTSRQKTLILNALHKSS HRRRSRRRV T+R IA+KIHRN  V+  EEADEKEA+ERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL
Subjt:  MDKPQIQTLKQTTTSRQKTLILNALHKSSPHRRRSRRRVSTTR-IAEKIHRNDAVYASEEADEKEAIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNL

Query:  QHQVKAMRALSSFFESLEKEKSKCGG
        QHQVKAMRALSSFFESLEKEKS+CGG
Subjt:  QHQVKAMRALSSFFESLEKEKSKCGG

A0A6J1GL48 transcription factor PAR2-like1.2e-3876Show/hide
Query:  MDKPQIQTLKQTTTSRQKTLILNALHKSSPHRRRSRRRVSTTRIAEKIHRNDAVYASEEADEKEAIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
        MDKPQ QTL  TT SRQK            HRRRSRR+V  T   +KIHRN AV+A EE DEKE +ERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
Subjt:  MDKPQIQTLKQTTTSRQKTLILNALHKSSPHRRRSRRRVSTTRIAEKIHRNDAVYASEEADEKEAIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ

Query:  HQVKAMRALSSFFESLEKEKSKCGG
        HQVKAMRALSSFFESLEKEKS+CGG
Subjt:  HQVKAMRALSSFFESLEKEKSKCGG

A0A6J1I119 transcription factor PAR2-like1.2e-3876Show/hide
Query:  MDKPQIQTLKQTTTSRQKTLILNALHKSSPHRRRSRRRVSTTRIAEKIHRNDAVYASEEADEKEAIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
        MDKPQ QTL  TT SRQK            HRRRSRR+V  T  A+KIHRN AV+AS E DEKE +ERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ
Subjt:  MDKPQIQTLKQTTTSRQKTLILNALHKSSPHRRRSRRRVSTTRIAEKIHRNDAVYASEEADEKEAIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQ

Query:  HQVKAMRALSSFFESLEKEKSKCGG
        HQVKAMRALS+FFESLEKEKS+CGG
Subjt:  HQVKAMRALSSFFESLEKEKSKCGG

SwissProt top hitse value%identityAlignment
Q9LXR7 Transcription factor PAR21.4e-1241.03Show/hide
Query:  QKTLILNALHKSSPHRRRSRRRVSTTRIAEKIHR--NDAVYASEEAD------EKEAIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRA
        +KTL  +   +SSP    S    S+T    +  +  +DA  +  E D      ++E +E KI ALQ+IVPGG  LGVD LFE+TA YI+ LQ Q+ A++ 
Subjt:  QKTLILNALHKSSPHRRRSRRRVSTTRIAEKIHR--NDAVYASEEAD------EKEAIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRA

Query:  LSSFFESLEKEKSKCGG
        L++F E  EK+  K GG
Subjt:  LSSFFESLEKEKSKCGG

Q9SJH0 Transcription factor PAR12.8e-1344.44Show/hide
Query:  KSSPHRRRSRRRVSTTRIAEKIHRNDAVYASEEADEKEAIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFESLEKEKSKCGG
        +++   RR++RR+S T  +    R D   A EE DE   ++ KI ALQ I+PGG +LGVD LFE+TA YI++LQ Q+K ++ L+SF + +++E  K GG
Subjt:  KSSPHRRRSRRRVSTTRIAEKIHRNDAVYASEEADEKEAIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFESLEKEKSKCGG

Arabidopsis top hitse value%identityAlignment
AT1G09250.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein4.2e-0441.3Show/hide
Query:  AIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALS
        A+ERK++ L  +VPG   + V  L ++  +YI  L+ QV+AM AL+
Subjt:  AIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALS

AT2G42870.1 phy rapidly regulated 12.0e-1444.44Show/hide
Query:  KSSPHRRRSRRRVSTTRIAEKIHRNDAVYASEEADEKEAIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFESLEKEKSKCGG
        +++   RR++RR+S T  +    R D   A EE DE   ++ KI ALQ I+PGG +LGVD LFE+TA YI++LQ Q+K ++ L+SF + +++E  K GG
Subjt:  KSSPHRRRSRRRVSTTRIAEKIHRNDAVYASEEADEKEAIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFESLEKEKSKCGG

AT3G21330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein5.5e-0440.43Show/hide
Query:  KEAIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRAL
        +E I  KIR LQ++VPGG  +    + ++ A Y+  L+ QVKA+  L
Subjt:  KEAIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRAL

AT3G58850.1 phy rapidly regulated 21.0e-1341.03Show/hide
Query:  QKTLILNALHKSSPHRRRSRRRVSTTRIAEKIHR--NDAVYASEEAD------EKEAIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRA
        +KTL  +   +SSP    S    S+T    +  +  +DA  +  E D      ++E +E KI ALQ+IVPGG  LGVD LFE+TA YI+ LQ Q+ A++ 
Subjt:  QKTLILNALHKSSPHRRRSRRRVSTTRIAEKIHR--NDAVYASEEAD------EKEAIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRA

Query:  LSSFFESLEKEKSKCGG
        L++F E  EK+  K GG
Subjt:  LSSFFESLEKEKSKCGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAACCTCAAATTCAAACTCTCAAACAAACAACCACTTCTCGCCAAAAAACCCTAATCCTCAACGCATTGCACAAATCCTCTCCTCATCGACGCCGGAGCCGGAG
AAGAGTATCGACCACCCGCATTGCCGAGAAGATTCACCGAAACGACGCTGTTTACGCCTCCGAAGAAGCCGATGAGAAGGAAGCCATCGAACGCAAGATTCGCGCCTTGC
AGAGCATCGTTCCAGGAGGGGAATCGCTTGGAGTCGACAAGCTGTTTGAACAGACGGCGGAGTATATAATGAATTTGCAGCATCAAGTTAAGGCCATGAGAGCACTCTCG
AGCTTTTTCGAAAGCTTGGAGAAGGAGAAATCCAAGTGTGGAGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACAAACCTCAAATTCAAACTCTCAAACAAACAACCACTTCTCGCCAAAAAACCCTAATCCTCAACGCATTGCACAAATCCTCTCCTCATCGACGCCGGAGCCGGAG
AAGAGTATCGACCACCCGCATTGCCGAGAAGATTCACCGAAACGACGCTGTTTACGCCTCCGAAGAAGCCGATGAGAAGGAAGCCATCGAACGCAAGATTCGCGCCTTGC
AGAGCATCGTTCCAGGAGGGGAATCGCTTGGAGTCGACAAGCTGTTTGAACAGACGGCGGAGTATATAATGAATTTGCAGCATCAAGTTAAGGCCATGAGAGCACTCTCG
AGCTTTTTCGAAAGCTTGGAGAAGGAGAAATCCAAGTGTGGAGGTTGA
Protein sequenceShow/hide protein sequence
MDKPQIQTLKQTTTSRQKTLILNALHKSSPHRRRSRRRVSTTRIAEKIHRNDAVYASEEADEKEAIERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALS
SFFESLEKEKSKCGG