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Lsi11G016410 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G016410
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionXyloglucan endotransglucosylase/hydrolase
Genome locationchr11:24743335..24743664
RNA-Seq ExpressionLsi11G016410
SyntenyLsi11G016410
Gene Ontology termsGO:0010411 - xyloglucan metabolic process (biological process)
GO:0042546 - cell wall biogenesis (biological process)
GO:0071555 - cell wall organization (biological process)
GO:0005618 - cell wall (cellular component)
GO:0048046 - apoplast (cellular component)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
GO:0016762 - xyloglucan:xyloglucosyl transferase activity (molecular function)
InterPro domainsIPR010713 - Xyloglucan endo-transglycosylase, C-terminal
IPR013320 - Concanavalin A-like lectin/glucanase domain superfamily
IPR044791 - Beta-glucanase/XTH


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CCH26410.1 xyloglucan endotransglycosylase [Cucumis sativus]1.7e-5191.82Show/hide
Query:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIG-SSSCSSKFANTLQGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGI
        M+VYSSLWNADDWATRGG VKTDWTKAPFTASY NFNANGCVAS G SSSCSSK+ANT QGGAKNNQGLDAKSRNRLRWVQSKFM+YNYCTDR+RFPQGI
Subjt:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIG-SSSCSSKFANTLQGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGI

Query:  PAECRRSRFL
        PAECRRSRFL
Subjt:  PAECRRSRFL

KAG7012038.1 hypothetical protein SDJN02_26946 [Cucurbita argyrosperma subsp. argyrosperma]3.4e-5291.74Show/hide
Query:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTLQGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGIP
        MRVYSSLWNADDWATRGGLVKTDWTKAPFTASY NFNANGC+A  GS+SCSSKFANTLQGG K+ QGLDAKSRNR+RWVQSKFMIYNYCTDRKRFPQGIP
Subjt:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTLQGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGIP

Query:  AECRRSRFL
        AECRRSRFL
Subjt:  AECRRSRFL

XP_023554750.1 xyloglucan endotransglucosylase/hydrolase 2-like [Cucurbita pepo subsp. pepo]2.6e-5292.66Show/hide
Query:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTLQGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGIP
        MRVYSSLWNADDWATRGGLVKTDWTKAPFTASY NFNANGCVAS GS+SCSS FANTLQGG K  QGLDAKSRNR+RWVQSKFMIYNYCTDRKRFPQGIP
Subjt:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTLQGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGIP

Query:  AECRRSRFL
        AECRRSRFL
Subjt:  AECRRSRFL

XP_038888389.1 probable xyloglucan endotransglucosylase/hydrolase protein 16 [Benincasa hispida]3.6e-5497.27Show/hide
Query:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTLQ-GGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGI
        MRVYSSLWNADDWATRGGLVKTDWTKAPFTASY NFNANGCVAS GSSSCSSKFANTLQ GGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGI
Subjt:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTLQ-GGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGI

Query:  PAECRRSRFL
        PAECRRSRFL
Subjt:  PAECRRSRFL

XP_038888491.1 xyloglucan endotransglucosylase/hydrolase 2-like [Benincasa hispida]1.3e-5190.83Show/hide
Query:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTLQGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGIP
        MRVYSSLWNADDWATRGGLVKTDWT+APFTASY NFNANGCVAS GSSSC SKF+NTLQGGA++NQGLDAKSRNRLRWVQSKFMIYNYCTD KRFPQGIP
Subjt:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTLQGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGIP

Query:  AECRRSRFL
        AEC+R RFL
Subjt:  AECRRSRFL

TrEMBL top hitse value%identityAlignment
A0A0A0KI20 Xyloglucan endotransglucosylase/hydrolase2.4e-5190.91Show/hide
Query:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIG-SSSCSSKFANTLQGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGI
        M+VYSSLWNADDWATRGG VKTDWTKAPFTASY NFNANGCVAS G SSSCSSK+ANT QGG KNNQGLDAKSRNRLRWVQSKFM+YNYCTDR+RFPQGI
Subjt:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIG-SSSCSSKFANTLQGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGI

Query:  PAECRRSRFL
        PAECRRSRFL
Subjt:  PAECRRSRFL

A0A6J1D3H9 Xyloglucan endotransglucosylase/hydrolase8.1e-5290.83Show/hide
Query:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTLQGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGIP
        MRVYSSLWNADDWATRGGLVKTDWTKAPFTASY NFNANGCVA+ GSSSC SKFANTLQGGA+N+QGLD KSRNRLRWVQSKFMIYNYCTD KRFPQG+P
Subjt:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTLQGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGIP

Query:  AECRRSRFL
        AECRR RFL
Subjt:  AECRRSRFL

A0A6J1GJU1 Xyloglucan endotransglucosylase/hydrolase2.0e-5089.91Show/hide
Query:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTLQGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGIP
        MRVYSSLWNADDWATRGGLVKTDWTKAPFTASY N NANGCVA  G +SCSS FANTLQGG K +QGLDAKSRNR+RWVQSKFMIYNYCTDRKRFPQGIP
Subjt:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTLQGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGIP

Query:  AECRRSRFL
        AECRRSRFL
Subjt:  AECRRSRFL

N0DX78 Xyloglucan endotransglucosylase/hydrolase4.9e-4988.99Show/hide
Query:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTLQGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGIP
        MRVYSSLWNADDWATRGGLVKTDWT+APFTASY NFNANGCVAS GSSSC SKF++TLQGGA++  GLDAKSRNRLRWVQSKFMIYNYCTD KRFPQGIP
Subjt:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTLQGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGIP

Query:  AECRRSRFL
        AECRR RFL
Subjt:  AECRRSRFL

N0DX84 Xyloglucan endotransglucosylase/hydrolase8.1e-5291.82Show/hide
Query:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIG-SSSCSSKFANTLQGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGI
        M+VYSSLWNADDWATRGG VKTDWTKAPFTASY NFNANGCVAS G SSSCSSK+ANT QGGAKNNQGLDAKSRNRLRWVQSKFM+YNYCTDR+RFPQGI
Subjt:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIG-SSSCSSKFANTLQGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGI

Query:  PAECRRSRFL
        PAECRRSRFL
Subjt:  PAECRRSRFL

SwissProt top hitse value%identityAlignment
Q38857 Xyloglucan endotransglucosylase/hydrolase protein 226.2e-3363.11Show/hide
Query:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTLQGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGIP
        MR+YSSLWNADDWATRGGLVKTDW+KAPFTASY  F    CV S G SSC +        G+  +Q LD+ ++ R+RWVQ  +MIYNYCTD KRFPQG+P
Subjt:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTLQGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGIP

Query:  AEC
         EC
Subjt:  AEC

Q38907 Probable xyloglucan endotransglucosylase/hydrolase protein 254.5e-3162.5Show/hide
Query:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTLQGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGIP
        MR+YSSLWNAD WATRGGLVKTDW+KAPFTASY NF A+ CV+S G SSC +            +Q LD  + +++R VQ K+MIYNYCTD KRFPQG P
Subjt:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTLQGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGIP

Query:  AECR
         ECR
Subjt:  AECR

Q38910 Probable xyloglucan endotransglucosylase/hydrolase protein 235.8e-3160.19Show/hide
Query:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTLQGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGIP
        MR+YSSLWNA++WATRGGLVKTDW+KAPFTASY  FN   CV   G SSC +  +     G+  +Q LD+  + ++RWVQ+ +MIYNYCTD KRFPQG+P
Subjt:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTLQGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGIP

Query:  AEC
         EC
Subjt:  AEC

Q38911 Xyloglucan endotransglucosylase/hydrolase protein 154.0e-3262.96Show/hide
Query:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTL-QGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGI
        MR+YSSLWNADDWATRGGLVKTDW+KAPFTA Y  FNA  C A   SS C  KF ++   G  +    L+A  R RLRWVQ  FMIYNYC+D KRFP+G 
Subjt:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTL-QGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGI

Query:  PAECRRSR
        P EC++SR
Subjt:  PAECRRSR

Q8LG58 Probable xyloglucan endotransglucosylase/hydrolase protein 163.3e-3463.89Show/hide
Query:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTLQGG-AKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGI
        M++YSSLWNADDWATRGGLVKTDW+KAPFTA Y  FNA  C  S GSS C  KF ++   G ++    L+A  R RLRWVQ  FMIY+YC+D KRFPQG 
Subjt:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTLQGG-AKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGI

Query:  PAECRRSR
        P ECR+SR
Subjt:  PAECRRSR

Arabidopsis top hitse value%identityAlignment
AT3G23730.1 xyloglucan endotransglucosylase/hydrolase 162.3e-3563.89Show/hide
Query:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTLQGG-AKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGI
        M++YSSLWNADDWATRGGLVKTDW+KAPFTA Y  FNA  C  S GSS C  KF ++   G ++    L+A  R RLRWVQ  FMIY+YC+D KRFPQG 
Subjt:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTLQGG-AKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGI

Query:  PAECRRSR
        P ECR+SR
Subjt:  PAECRRSR

AT4G14130.1 xyloglucan endotransglucosylase/hydrolase 152.9e-3362.96Show/hide
Query:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTL-QGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGI
        MR+YSSLWNADDWATRGGLVKTDW+KAPFTA Y  FNA  C A   SS C  KF ++   G  +    L+A  R RLRWVQ  FMIYNYC+D KRFP+G 
Subjt:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTL-QGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGI

Query:  PAECRRSR
        P EC++SR
Subjt:  PAECRRSR

AT4G25810.1 xyloglucan endotransglycosylase 64.1e-3260.19Show/hide
Query:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTLQGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGIP
        MR+YSSLWNA++WATRGGLVKTDW+KAPFTASY  FN   CV   G SSC +  +     G+  +Q LD+  + ++RWVQ+ +MIYNYCTD KRFPQG+P
Subjt:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTLQGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGIP

Query:  AEC
         EC
Subjt:  AEC

AT5G57550.1 xyloglucan endotransglucosylase/hydrolase 253.2e-3262.5Show/hide
Query:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTLQGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGIP
        MR+YSSLWNAD WATRGGLVKTDW+KAPFTASY NF A+ CV+S G SSC +            +Q LD  + +++R VQ K+MIYNYCTD KRFPQG P
Subjt:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTLQGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGIP

Query:  AECR
         ECR
Subjt:  AECR

AT5G57560.1 Xyloglucan endotransglucosylase/hydrolase family protein4.4e-3463.11Show/hide
Query:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTLQGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGIP
        MR+YSSLWNADDWATRGGLVKTDW+KAPFTASY  F    CV S G SSC +        G+  +Q LD+ ++ R+RWVQ  +MIYNYCTD KRFPQG+P
Subjt:  MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTLQGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGIP

Query:  AEC
         EC
Subjt:  AEC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGTATATTCAAGTCTATGGAATGCAGATGATTGGGCAACCAGAGGAGGGCTAGTGAAGACAGATTGGACAAAGGCCCCTTTCACAGCATCTTACAGCAACTTCAA
TGCCAATGGGTGTGTAGCATCAATTGGGTCATCATCTTGTAGCTCCAAATTTGCCAATACTCTGCAAGGTGGAGCCAAAAACAATCAAGGATTGGACGCCAAGAGTAGGA
ATAGATTGAGATGGGTGCAATCCAAGTTCATGATTTATAATTACTGCACTGACCGTAAAAGATTTCCTCAAGGCATCCCAGCTGAATGTAGGCGCTCAAGGTTTCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGTATATTCAAGTCTATGGAATGCAGATGATTGGGCAACCAGAGGAGGGCTAGTGAAGACAGATTGGACAAAGGCCCCTTTCACAGCATCTTACAGCAACTTCAA
TGCCAATGGGTGTGTAGCATCAATTGGGTCATCATCTTGTAGCTCCAAATTTGCCAATACTCTGCAAGGTGGAGCCAAAAACAATCAAGGATTGGACGCCAAGAGTAGGA
ATAGATTGAGATGGGTGCAATCCAAGTTCATGATTTATAATTACTGCACTGACCGTAAAAGATTTCCTCAAGGCATCCCAGCTGAATGTAGGCGCTCAAGGTTTCTATGA
Protein sequenceShow/hide protein sequence
MRVYSSLWNADDWATRGGLVKTDWTKAPFTASYSNFNANGCVASIGSSSCSSKFANTLQGGAKNNQGLDAKSRNRLRWVQSKFMIYNYCTDRKRFPQGIPAECRRSRFL