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Lsi11G016560 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G016560
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr11:24865678..24867343
RNA-Seq ExpressionLsi11G016560
SyntenyLsi11G016560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN47981.1 hypothetical protein Csa_004084 [Cucumis sativus]1.8e-1037.02Show/hide
Query:  MVSSMGPARANPRGRVHDSPKPLPLSRHSTLRDHPPNHERPDGPTRTGAHF------NYNKENKVKSDL--------------------SSFIFLFLVLA
        MVS  GP RANP      S   L +   + LR  PPNHE P GPT+             N EN+ +SDL                     SF F      
Subjt:  MVSSMGPARANPRGRVHDSPKPLPLSRHSTLRDHPPNHERPDGPTRTGAHF------NYNKENKVKSDL--------------------SSFIFLFLVLA

Query:  FHLHIPAHFFNSFLRLF---------------------------SEKLIHARVEYIETGSQEVGGCHREPFFPRWCDIEVL
        FHLHI +HF N FLR F                            +   HARV+ IE  SQEV G HR PFF RWCDIEVL
Subjt:  FHLHIPAHFFNSFLRLF---------------------------SEKLIHARVEYIETGSQEVGGCHREPFFPRWCDIEVL
TrEMBL top hitse value%identityAlignment
A0A0A0KJP7 Uncharacterized protein8.6e-1137.02Show/hide
Query:  MVSSMGPARANPRGRVHDSPKPLPLSRHSTLRDHPPNHERPDGPTRTGAHF------NYNKENKVKSDL--------------------SSFIFLFLVLA
        MVS  GP RANP      S   L +   + LR  PPNHE P GPT+             N EN+ +SDL                     SF F      
Subjt:  MVSSMGPARANPRGRVHDSPKPLPLSRHSTLRDHPPNHERPDGPTRTGAHF------NYNKENKVKSDL--------------------SSFIFLFLVLA

Query:  FHLHIPAHFFNSFLRLF---------------------------SEKLIHARVEYIETGSQEVGGCHREPFFPRWCDIEVL
        FHLHI +HF N FLR F                            +   HARV+ IE  SQEV G HR PFF RWCDIEVL
Subjt:  FHLHIPAHFFNSFLRLF---------------------------SEKLIHARVEYIETGSQEVGGCHREPFFPRWCDIEVL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAGCAGCATGGGACCCGCCCGGGCGAACCCTCGCGGTCGGGTTCATGATTCTCCAAAACCTTTGCCACTGAGCCGGCACTCTACGCTACGTGACCATCCACCGAA
CCACGAACGACCCGACGGCCCCACCCGTACCGGCGCGCACTTCAATTATAATAAAGAAAATAAAGTAAAATCAGATCTCTCCTCATTCATCTTCCTCTTCCTGGTTCTTG
CATTCCATCTGCATATTCCTGCTCATTTCTTCAATTCGTTCCTCAGATTATTCTCAGAAAAGCTTATACACGCGAGGGTTGAATATATTGAGACTGGAAGTCAAGAAGTA
GGTGGTTGTCATAGAGAACCATTTTTTCCAAGATGGTGTGACATAGAGGTACTGTCCCAGTGGACACTCCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCAGCAGCATGGGACCCGCCCGGGCGAACCCTCGCGGTCGGGTTCATGATTCTCCAAAACCTTTGCCACTGAGCCGGCACTCTACGCTACGTGACCATCCACCGAA
CCACGAACGACCCGACGGCCCCACCCGTACCGGCGCGCACTTCAATTATAATAAAGAAAATAAAGTAAAATCAGATCTCTCCTCATTCATCTTCCTCTTCCTGGTTCTTG
CATTCCATCTGCATATTCCTGCTCATTTCTTCAATTCGTTCCTCAGATTATTCTCAGAAAAGCTTATACACGCGAGGGTTGAATATATTGAGACTGGAAGTCAAGAAGTA
GGTGGTTGTCATAGAGAACCATTTTTTCCAAGATGGTGTGACATAGAGGTACTGTCCCAGTGGACACTCCACTAA
Protein sequenceShow/hide protein sequence
MVSSMGPARANPRGRVHDSPKPLPLSRHSTLRDHPPNHERPDGPTRTGAHFNYNKENKVKSDLSSFIFLFLVLAFHLHIPAHFFNSFLRLFSEKLIHARVEYIETGSQEV
GGCHREPFFPRWCDIEVLSQWTLH