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Lsi11G016630 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G016630
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr11:24900103..24900480
RNA-Seq ExpressionLsi11G016630
SyntenyLsi11G016630
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061659.1 hypothetical protein E6C27_scaffold212G00280 [Cucumis melo var. makuwa]9.6e-4375Show/hide
Query:  MGISKGLSFVCVIAILICKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGRITSVNYNEN--DDEDEFDDTYKVVGKLSMALSMSESTDAAEKR
        MGISK LSFVCVIAIL+ KVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQH+GRI+SVNYNEN  DD+DEFDD YKVVGKLS+++S       AE +
Subjt:  MGISKGLSFVCVIAILICKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGRITSVNYNEN--DDEDEFDDTYKVVGKLSMALSMSESTDAAEKR

Query:  ALGLELETIAPEEPITGRVIVLGH
        A GLEL TI+P++ ++  VIVLGH
Subjt:  ALGLELETIAPEEPITGRVIVLGH

KAE8647343.1 hypothetical protein Csa_003811 [Cucumis sativus]1.1e-4383.64Show/hide
Query:  MGSMGISKGLSFVCVIAILICKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGRITSVNYNENDDEDEFDDTYKVVGKLSMALSMSESTDAAEK
        M  MGISKGLSFVCVIAILICKVADAD+DHFGIHAVGHAVEPFCPGGYSDRGDHCQH+GRI+SVNYNENDD+DEFDDTYKVVGKLS +L    S +AAE 
Subjt:  MGSMGISKGLSFVCVIAILICKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGRITSVNYNENDDEDEFDDTYKVVGKLSMALSMSESTDAAEK

Query:  RALGLELETI
        RA GLELE++
Subjt:  RALGLELETI

KAG6572424.1 hypothetical protein SDJN03_29152, partial [Cucurbita argyrosperma subsp. sororia]1.2e-4074.55Show/hide
Query:  IAILICKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGRITSVNYNENDDEDEFDDTYKVVGKLSMALSMSESTDAAEKRALGLELETIAPEEP
        I++L  K+A AD  HFGIHA+GHAVEPFCPGGYSDRGDHC HIGRITSVNY E+DD+D+FDDTYKV+GKLSMA+S+SESTD AEK A+GLELE I+PEE 
Subjt:  IAILICKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGRITSVNYNENDDEDEFDDTYKVVGKLSMALSMSESTDAAEKRALGLELETIAPEEP

Query:  ITGRVIVLGH
        ++ +V VLGH
Subjt:  ITGRVIVLGH

KAG6589281.1 hypothetical protein SDJN03_17846, partial [Cucurbita argyrosperma subsp. sororia]7.1e-2253.17Show/hide
Query:  MGISKGLSFVCVIAILIC----KVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGRITSVNYNENDDEDEFDDTYKVVGKLSMALSMSESTDAAE
        M ISKGLSF+ ++AI IC    +VADA S H G     HAVE  CPGG    G+HC H GR+ +   +E+DD   FDDTYK   K  MA+SMSEST+ AE
Subjt:  MGISKGLSFVCVIAILIC----KVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGRITSVNYNENDDEDEFDDTYKVVGKLSMALSMSESTDAAE

Query:  KRALGLELETIAPEEPITGRVIVLGH
        +RA+ +E+ET +PEEP   +V+VLGH
Subjt:  KRALGLELETIAPEEPITGRVIVLGH

TrEMBL top hitse value%identityAlignment
A0A0A0KE60 Uncharacterized protein1.2e-4677.6Show/hide
Query:  MGSMGISKGLSFVCVIAILICKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGRITSVNYNENDDEDEFDDTYKVVGKLSMALSMSESTDAAEK
        M  MGISKGLSFVCVIAILICKVADAD+DHFGIHAVGHAVEPFCPGGYSDRGDHCQH+GRI+SVNYNENDD+DEFDDTYKVVGKLS +L    S +AAE 
Subjt:  MGSMGISKGLSFVCVIAILICKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGRITSVNYNENDDEDEFDDTYKVVGKLSMALSMSESTDAAEK

Query:  RALGLELETIAPEEPITGRVIVLGH
        RA GLEL   +P + ++ + IVLGH
Subjt:  RALGLELETIAPEEPITGRVIVLGH

A0A2N9FLD3 Uncharacterized protein8.6e-0535.04Show/hide
Query:  VIAILICKVADAD-SDHFG-IHAVGHAVEPFCPGGYSDRGDHCQHIGRITSVNYNENDD----EDEFDDTYKVVGKLSMALSMSESTDAAEKRALGLELE
        ++ +L+ KV++AD SDH+  IH + H     C G + + GD C+          N++DD    +D+ DDTYKVV K  M++S S ST  +       E +
Subjt:  VIAILICKVADAD-SDHFG-IHAVGHAVEPFCPGGYSDRGDHCQHIGRITSVNYNENDD----EDEFDDTYKVVGKLSMALSMSESTDAAEKRALGLELE

Query:  TIAPEEPITGRVIVLGH
          + EE +   +IVLGH
Subjt:  TIAPEEPITGRVIVLGH

A0A5A7V7L4 Uncharacterized protein4.6e-4375Show/hide
Query:  MGISKGLSFVCVIAILICKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGRITSVNYNEN--DDEDEFDDTYKVVGKLSMALSMSESTDAAEKR
        MGISK LSFVCVIAIL+ KVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQH+GRI+SVNYNEN  DD+DEFDD YKVVGKLS+++S       AE +
Subjt:  MGISKGLSFVCVIAILICKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGRITSVNYNEN--DDEDEFDDTYKVVGKLSMALSMSESTDAAEKR

Query:  ALGLELETIAPEEPITGRVIVLGH
        A GLEL TI+P++ ++  VIVLGH
Subjt:  ALGLELETIAPEEPITGRVIVLGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAGTATGGGAATTTCGAAAGGGCTATCATTTGTTTGCGTCATCGCCATCTTGATTTGCAAAGTCGCCGACGCCGACTCCGACCACTTCGGCATCCACGCAGTGGG
GCACGCGGTGGAGCCGTTCTGCCCAGGTGGATACTCGGACAGAGGGGACCACTGCCAGCACATCGGCCGCATCACCTCCGTAAACTACAACGAGAATGATGACGAGGACG
AATTTGACGACACGTATAAAGTAGTGGGAAAGCTTTCGATGGCGTTGTCCATGTCGGAGTCCACAGATGCCGCCGAAAAACGGGCGTTGGGTTTAGAACTTGAAACCATT
GCACCTGAAGAACCGATTACCGGTAGAGTCATCGTCTTGGGGCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCAGTATGGGAATTTCGAAAGGGCTATCATTTGTTTGCGTCATCGCCATCTTGATTTGCAAAGTCGCCGACGCCGACTCCGACCACTTCGGCATCCACGCAGTGGG
GCACGCGGTGGAGCCGTTCTGCCCAGGTGGATACTCGGACAGAGGGGACCACTGCCAGCACATCGGCCGCATCACCTCCGTAAACTACAACGAGAATGATGACGAGGACG
AATTTGACGACACGTATAAAGTAGTGGGAAAGCTTTCGATGGCGTTGTCCATGTCGGAGTCCACAGATGCCGCCGAAAAACGGGCGTTGGGTTTAGAACTTGAAACCATT
GCACCTGAAGAACCGATTACCGGTAGAGTCATCGTCTTGGGGCATTGA
Protein sequenceShow/hide protein sequence
MGSMGISKGLSFVCVIAILICKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHIGRITSVNYNENDDEDEFDDTYKVVGKLSMALSMSESTDAAEKRALGLELETI
APEEPITGRVIVLGH