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Lsi11G016820 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G016820
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPLASMODESMATA CALLOSE-BINDING PROTEIN 5
Genome locationchr11:25042262..25043244
RNA-Seq ExpressionLsi11G016820
SyntenyLsi11G016820
Gene Ontology termsGO:0009506 - plasmodesma (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR012946 - X8 domain
IPR044788 - Carbohydrate-binding X8 domain-containing protein, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061642.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 5 [Cucumis melo var. makuwa]1.3e-6789.66Show/hide
Query:  MPNNISLFLLILLIHGSAADP-RRPSIRDQSGSAMELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDD
        MP N SLFLLILLI  +AADP RRPSIRDQSG+A ELWCVAKNNADDASLQSAL+WACGAGGADCSPIQPGG+CYDA DVQNMASFAFNDYFRKHGMTDD
Subjt:  MPNNISLFLLILLIHGSAADP-RRPSIRDQSGSAMELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDD

Query:  SCFFQNAAAITSLNPSMLRKLQIPIQFVEKWEFLKPNDIGRVGAE
        SCFFQN+AAITSLNPSMLRKLQIPI+ VEKWEF KPNDIGRVGAE
Subjt:  SCFFQNAAAITSLNPSMLRKLQIPIQFVEKWEFLKPNDIGRVGAE

KAE8647341.1 hypothetical protein Csa_004137 [Cucumis sativus]6.0e-4985.22Show/hide
Query:  MPNNISLFLLILLIHGSAADPRRPSIRDQSGSAMELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDDS
        MP   SLFLLILLI  +A  P RPSIRDQS +A ELWCVAKNNADDASLQSAL+WACGAGGADCSPIQPGG+CYD+ DVQNMASFAFNDYFRKHGMTDDS
Subjt:  MPNNISLFLLILLIHGSAADPRRPSIRDQSGSAMELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDDS

Query:  CFFQNAAAITSLNPS
        CFFQN+AAITSLNPS
Subjt:  CFFQNAAAITSLNPS

XP_004140118.2 PLASMODESMATA CALLOSE-BINDING PROTEIN 5 [Cucumis sativus]6.0e-4985.22Show/hide
Query:  MPNNISLFLLILLIHGSAADPRRPSIRDQSGSAMELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDDS
        MP   SLFLLILLI  +A  P RPSIRDQS +A ELWCVAKNNADDASLQSAL+WACGAGGADCSPIQPGG+CYD+ DVQNMASFAFNDYFRKHGMTDDS
Subjt:  MPNNISLFLLILLIHGSAADPRRPSIRDQSGSAMELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDDS

Query:  CFFQNAAAITSLNPS
        CFFQN+AAITSLNPS
Subjt:  CFFQNAAAITSLNPS

XP_008449471.1 PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 5 [Cucumis melo]2.2e-5189.66Show/hide
Query:  MPNNISLFLLILLIHGSAADP-RRPSIRDQSGSAMELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDD
        MP N SLFLLILLI  +AADP RRPSIRDQSG+A ELWCVAKNNADDASLQSAL+WACGAGGADCSPIQPGG+CYDA DVQNMASFAFNDYFRKHGMTDD
Subjt:  MPNNISLFLLILLIHGSAADP-RRPSIRDQSGSAMELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDD

Query:  SCFFQNAAAITSLNPS
        SCFFQN+AAITSLNPS
Subjt:  SCFFQNAAAITSLNPS

XP_038877601.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Benincasa hispida]6.2e-5492.17Show/hide
Query:  MPNNISLFLLILLIHGSAADPRRPSIRDQSGSAMELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDDS
        MPNN SLFLLILLI  +AADPRRPSIRDQSG A ELWCVAKNNADDASLQSAL+WACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDDS
Subjt:  MPNNISLFLLILLIHGSAADPRRPSIRDQSGSAMELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDDS

Query:  CFFQNAAAITSLNPS
        CFFQN+AA+TSLNPS
Subjt:  CFFQNAAAITSLNPS

TrEMBL top hitse value%identityAlignment
A0A0A0KHV2 X8 domain-containing protein2.9e-4985.22Show/hide
Query:  MPNNISLFLLILLIHGSAADPRRPSIRDQSGSAMELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDDS
        MP   SLFLLILLI  +A  P RPSIRDQS +A ELWCVAKNNADDASLQSAL+WACGAGGADCSPIQPGG+CYD+ DVQNMASFAFNDYFRKHGMTDDS
Subjt:  MPNNISLFLLILLIHGSAADPRRPSIRDQSGSAMELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDDS

Query:  CFFQNAAAITSLNPS
        CFFQN+AAITSLNPS
Subjt:  CFFQNAAAITSLNPS

A0A1S3BN12 PLASMODESMATA CALLOSE-BINDING PROTEIN 51.1e-5189.66Show/hide
Query:  MPNNISLFLLILLIHGSAADP-RRPSIRDQSGSAMELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDD
        MP N SLFLLILLI  +AADP RRPSIRDQSG+A ELWCVAKNNADDASLQSAL+WACGAGGADCSPIQPGG+CYDA DVQNMASFAFNDYFRKHGMTDD
Subjt:  MPNNISLFLLILLIHGSAADP-RRPSIRDQSGSAMELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDD

Query:  SCFFQNAAAITSLNPS
        SCFFQN+AAITSLNPS
Subjt:  SCFFQNAAAITSLNPS

A0A5D3C3I2 PLASMODESMATA CALLOSE-BINDING PROTEIN 56.3e-6889.66Show/hide
Query:  MPNNISLFLLILLIHGSAADP-RRPSIRDQSGSAMELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDD
        MP N SLFLLILLI  +AADP RRPSIRDQSG+A ELWCVAKNNADDASLQSAL+WACGAGGADCSPIQPGG+CYDA DVQNMASFAFNDYFRKHGMTDD
Subjt:  MPNNISLFLLILLIHGSAADP-RRPSIRDQSGSAMELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDD

Query:  SCFFQNAAAITSLNPSMLRKLQIPIQFVEKWEFLKPNDIGRVGAE
        SCFFQN+AAITSLNPSMLRKLQIPI+ VEKWEF KPNDIGRVGAE
Subjt:  SCFFQNAAAITSLNPSMLRKLQIPIQFVEKWEFLKPNDIGRVGAE

A0A6J1GMC7 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like5.0e-4987.93Show/hide
Query:  MPNNISLFLLILLIHG-SAADPRRPSIRDQSGSAMELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDD
        M NN +LFLLILLI G SAA+ R+PS RDQSG A ELWCVAKNNADDASLQSAL+WACGAGGADCSPIQPGGACYDA++VQNMASFAFNDYFRKHGMTDD
Subjt:  MPNNISLFLLILLIHG-SAADPRRPSIRDQSGSAMELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDD

Query:  SCFFQNAAAITSLNPS
        SCFFQNAAAITSLNPS
Subjt:  SCFFQNAAAITSLNPS

A0A6J1HZS5 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like4.2e-4886.21Show/hide
Query:  MPNNISLFLLILLIHG-SAADPRRPSIRDQSGSAMELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDD
        M NN +LFLLILLI G SAA+ R+PS R+QSG A +LWCVAKNNADDASLQSAL+WACGAGGADCSPIQPGGACYDA++VQNMASFAFNDYFRKHGMTDD
Subjt:  MPNNISLFLLILLIHG-SAADPRRPSIRDQSGSAMELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDD

Query:  SCFFQNAAAITSLNPS
        SCFFQNAAAITSLNPS
Subjt:  SCFFQNAAAITSLNPS

SwissProt top hitse value%identityAlignment
O65399 Glucan endo-1,3-beta-glucosidase 13.1e-1646.91Show/hide
Query:  ELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPS
        + +C+A +  D  +LQ+AL+WACG G ++CS IQPG +CY   +V+  ASFAFN Y++K G    SC F+  A IT+ +PS
Subjt:  ELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPS

Q94CD8 Glucan endo-1,3-beta-glucosidase 49.2e-1643.86Show/hide
Query:  PNNISLFLLILLIHGSAADPRRPSIRDQSGSAMELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDDSC
        PN  S++ L L    S+A          +GS+M  +CVAK +ADD  L   LNWACG G A+C+ IQPG  CY   DV++ ASFAFNDY++K      +C
Subjt:  PNNISLFLLILLIHGSAADPRRPSIRDQSGSAMELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDDSC

Query:  FFQNAAAITSLNPS
         F   A  T+ +PS
Subjt:  FFQNAAAITSLNPS

Q9C7U5 Glucan endo-1,3-beta-glucosidase 25.0e-1443.21Show/hide
Query:  ELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPS
        + +C A+  AD   LQ+AL+WACG G  DCSPI+ G  CY+  +V   A++AF+ Y+ + G   D+C F   A+IT+ +PS
Subjt:  ELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPS

Q9M2K6 PLASMODESMATA CALLOSE-BINDING PROTEIN 51.8e-2767.07Show/hide
Query:  MELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPS
        +ELWCVAKNNA+D+SLQ+A+ WACG GGADC PIQ GG C D  DVQ MASF FN+Y+ K+G  D++C F N AA+TSLNPS
Subjt:  MELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPS

Q9ZU91 Glucan endo-1,3-beta-glucosidase 36.6e-1441.98Show/hide
Query:  ELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPS
        + +C+AK   D   LQ+AL+WACG G  DCS +  G +CY+  DV   +++AFN Y++K G    SC F+  A +T+ +PS
Subjt:  ELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPS

Arabidopsis top hitse value%identityAlignment
AT1G11820.2 O-Glycosyl hydrolases family 17 protein2.2e-1746.91Show/hide
Query:  ELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPS
        + +C+A +  D  +LQ+AL+WACG G ++CS IQPG +CY   +V+  ASFAFN Y++K G    SC F+  A IT+ +PS
Subjt:  ELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPS

AT1G29380.1 Carbohydrate-binding X8 domain superfamily protein1.2e-1855.7Show/hide
Query:  WCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPS
        WC+AK NA   SLQ AL++ACG GGADC  IQ G ACY+   +++ ASFAFN Y++KH    DSC F  AA +TS +PS
Subjt:  WCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPS

AT2G05790.1 O-Glycosyl hydrolases family 17 protein2.9e-1750Show/hide
Query:  WCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNP
        WCVA  +A +  LQ  L++ACG GGADC PIQPG  CY    ++  ASFAFN Y++K G    SC+F  AA + S  P
Subjt:  WCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNP

AT3G13560.1 O-Glycosyl hydrolases family 17 protein6.5e-1743.86Show/hide
Query:  PNNISLFLLILLIHGSAADPRRPSIRDQSGSAMELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDDSC
        PN  S++ L L    S+A          +GS+M  +CVAK +ADD  L   LNWACG G A+C+ IQPG  CY   DV++ ASFAFNDY++K      +C
Subjt:  PNNISLFLLILLIHGSAADPRRPSIRDQSGSAMELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDDSC

Query:  FFQNAAAITSLNPS
         F   A  T+ +PS
Subjt:  FFQNAAAITSLNPS

AT3G58100.1 plasmodesmata callose-binding protein 51.3e-2867.07Show/hide
Query:  MELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPS
        +ELWCVAKNNA+D+SLQ+A+ WACG GGADC PIQ GG C D  DVQ MASF FN+Y+ K+G  D++C F N AA+TSLNPS
Subjt:  MELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGAATAATATCTCCCTCTTTCTCCTAATTCTTCTTATTCACGGCAGTGCGGCGGATCCCCGGAGGCCGTCCATCAGAGATCAGAGCGGCAGCGCCATGGAGCTCTG
GTGCGTGGCCAAGAACAACGCCGACGACGCCTCTCTGCAATCCGCCCTCAACTGGGCCTGCGGCGCCGGCGGCGCCGACTGTTCCCCAATCCAGCCTGGCGGCGCCTGCT
ACGACGCCGCCGACGTCCAGAACATGGCCTCCTTCGCCTTCAACGATTACTTCCGGAAACACGGCATGACCGACGACAGTTGCTTCTTCCAAAACGCTGCCGCTATCACC
TCCTTAAACCCTAGTATGCTTCGGAAATTGCAGATTCCCATCCAGTTTGTTGAGAAATGGGAATTTCTCAAGCCAAACGACATCGGTAGGGTTGGGGCCGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGAATAATATCTCCCTCTTTCTCCTAATTCTTCTTATTCACGGCAGTGCGGCGGATCCCCGGAGGCCGTCCATCAGAGATCAGAGCGGCAGCGCCATGGAGCTCTG
GTGCGTGGCCAAGAACAACGCCGACGACGCCTCTCTGCAATCCGCCCTCAACTGGGCCTGCGGCGCCGGCGGCGCCGACTGTTCCCCAATCCAGCCTGGCGGCGCCTGCT
ACGACGCCGCCGACGTCCAGAACATGGCCTCCTTCGCCTTCAACGATTACTTCCGGAAACACGGCATGACCGACGACAGTTGCTTCTTCCAAAACGCTGCCGCTATCACC
TCCTTAAACCCTAGTATGCTTCGGAAATTGCAGATTCCCATCCAGTTTGTTGAGAAATGGGAATTTCTCAAGCCAAACGACATCGGTAGGGTTGGGGCCGAGTGAAGACA
TAAGTGGGTCGGGTCGAAATTCGGGCCGGACATGGATTTGGCCCATGGTAATCGGGTATTTGTTTTTGAGAATTATGTTTCAATTTCAAAGGGGAAACTTGTTGTTCATC
TAGTTTTTCTGTATTTGATTGATTGATCATCTCTGATTTTGTTGGGGTGTGTTAGAATTAGAATTTTTTTTTTAATTAAGCAAATCCTTATTTTATATATGTTTTTTTTT
TTGGGACAATATCATTTTAAATCTTTAAATTTTGGAGGTCGTATCAAGGTGTATCAATCTATACCATTCACGGTTGACTTTTAGTTAAA
Protein sequenceShow/hide protein sequence
MPNNISLFLLILLIHGSAADPRRPSIRDQSGSAMELWCVAKNNADDASLQSALNWACGAGGADCSPIQPGGACYDAADVQNMASFAFNDYFRKHGMTDDSCFFQNAAAIT
SLNPSMLRKLQIPIQFVEKWEFLKPNDIGRVGAE