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Lsi11G016850 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G016850
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr11:25059507..25059797
RNA-Seq ExpressionLsi11G016850
SyntenyLsi11G016850
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4273203.1 unnamed protein product [Prunus armeniaca]2.5e-0642.5Show/hide
Query:  MEIAALRFHSDKENLPPFTHKQFPSNP--------KKPIIRRRFNRKPLLDITNL--FENSVRFG------SIQDGFVGSVESVC-LPSNSRKRKAGDE-
        ME +A R+HS+KENLPP +     +NP        KK   + R  RKPL DITNL  + N   FG      S    F  S  SV    SNSRKRK+  E 
Subjt:  MEIAALRFHSDKENLPPFTHKQFPSNP--------KKPIIRRRFNRKPLLDITNL--FENSVRFG------SIQDGFVGSVESVC-LPSNSRKRKAGDE-

Query:  ------ICSGTAKSLRMGFR
              + S  +KSLRMGFR
Subjt:  ------ICSGTAKSLRMGFR

GAV75989.1 hypothetical protein CFOL_v3_19465, partial [Cephalotus follicularis]8.2e-1048.6Show/hide
Query:  MEIAALRFHSDKENLPPFTHKQ-------FPSNPKKPIIRRRFNRKPLLDITNLFENSVRFGSIQDG----FVGSVESVCLPSNSRKRKAGDEICSGTAK
        ME   L  + +KEN+PPF+ KQ        PS  K P  +RRF RKPL DITNLF NSV   S Q+           SVC P N+RKRKA   + S ++K
Subjt:  MEIAALRFHSDKENLPPFTHKQ-------FPSNPKKPIIRRRFNRKPLLDITNLFENSVRFGSIQDG----FVGSVESVCLPSNSRKRKAGDEICSGTAK

Query:  SLRMGFR
        SLRMGFR
Subjt:  SLRMGFR

KAG6589263.1 hypothetical protein SDJN03_17828, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2873.96Show/hide
Query:  MEIAALRFHSDKENLPPFTHKQFPSNPKKPIIRRRFNRKPLLDITNLFENSVRFGSIQDGFVGSVESVCLPSNSRKRKAGDEICSGTAKSLRMGFR
        ME AA+RF S KENLP  + KQFP N KKPI RRR NRKPL DITN FE+SVRF  +QD   GSVESVCL  NS+KRKA DEICSGTAKSLRMGFR
Subjt:  MEIAALRFHSDKENLPPFTHKQFPSNPKKPIIRRRFNRKPLLDITNLFENSVRFGSIQDGFVGSVESVCLPSNSRKRKAGDEICSGTAKSLRMGFR

KGN47955.1 hypothetical protein Csa_002785 [Cucumis sativus]6.0e-3781.25Show/hide
Query:  MEIAALRFHSDKENLPPFTHKQFPSNPKKPIIRRRFNRKPLLDITNLFENSVRFGSIQDGFVGSVESVCLPSNSRKRKAGDEICSGTAKSLRMGFR
        ME +A+RFHSDKENLPPFTHK +PS PKKP IRRR NRKPLLDITN FEN++R GSIQDGF+ SVESVCL  NSRKRKAGDE+ SGTAKSLRMGFR
Subjt:  MEIAALRFHSDKENLPPFTHKQFPSNPKKPIIRRRFNRKPLLDITNLFENSVRFGSIQDGFVGSVESVCLPSNSRKRKAGDEICSGTAKSLRMGFR

XP_038682707.1 uncharacterized protein LOC119983110 [Tripterygium wilfordii]3.8e-0741.03Show/hide
Query:  MEIAALRFHSDKENLPPF-------------THKQFPSNPKKPIIRRRFNRKPLLDITNLFENSVRFGSIQDGFVGSVESVCL-PSNSRKRKAGDE----
        + + AL  H++KEN+PPF             + + F ++ K    R+   RKPL DITNLF NSV +   +D    S  SV +  SN RKRK+ DE    
Subjt:  MEIAALRFHSDKENLPPF-------------THKQFPSNPKKPIIRRRFNRKPLLDITNLFENSVRFGSIQDGFVGSVESVCL-PSNSRKRKAGDE----

Query:  ---ICSGTAKSLRMGFR
           ICS  +KSLRMGFR
Subjt:  ---ICSGTAKSLRMGFR

TrEMBL top hitse value%identityAlignment
A0A0A0KE31 Uncharacterized protein2.9e-3781.25Show/hide
Query:  MEIAALRFHSDKENLPPFTHKQFPSNPKKPIIRRRFNRKPLLDITNLFENSVRFGSIQDGFVGSVESVCLPSNSRKRKAGDEICSGTAKSLRMGFR
        ME +A+RFHSDKENLPPFTHK +PS PKKP IRRR NRKPLLDITN FEN++R GSIQDGF+ SVESVCL  NSRKRKAGDE+ SGTAKSLRMGFR
Subjt:  MEIAALRFHSDKENLPPFTHKQFPSNPKKPIIRRRFNRKPLLDITNLFENSVRFGSIQDGFVGSVESVCLPSNSRKRKAGDEICSGTAKSLRMGFR

A0A1Q3C6Z4 Uncharacterized protein (Fragment)4.0e-1048.6Show/hide
Query:  MEIAALRFHSDKENLPPFTHKQ-------FPSNPKKPIIRRRFNRKPLLDITNLFENSVRFGSIQDG----FVGSVESVCLPSNSRKRKAGDEICSGTAK
        ME   L  + +KEN+PPF+ KQ        PS  K P  +RRF RKPL DITNLF NSV   S Q+           SVC P N+RKRKA   + S ++K
Subjt:  MEIAALRFHSDKENLPPFTHKQ-------FPSNPKKPIIRRRFNRKPLLDITNLFENSVRFGSIQDG----FVGSVESVCLPSNSRKRKAGDEICSGTAK

Query:  SLRMGFR
        SLRMGFR
Subjt:  SLRMGFR

A0A2K3JL70 Uncharacterized protein1.6e-0640.78Show/hide
Query:  MEIAALRFHSDKENLPPFTHKQFP---SNPKKPIIRRRFNRKPLLDITNLFENSVRFGSIQDG-FVGSV---ESVCLPSNSRKRKAGDEICSGTAKSLRM
        M+I+ +   ++KEN+PP      P   S+ KK    R+  R PL DITNLF+NS  F    +G  V SV    S+ L SNSR+R       +  +K+LRM
Subjt:  MEIAALRFHSDKENLPPFTHKQFP---SNPKKPIIRRRFNRKPLLDITNLFENSVRFGSIQDG-FVGSV---ESVCLPSNSRKRKAGDEICSGTAKSLRM

Query:  GFR
        GFR
Subjt:  GFR

A0A6J5UAF7 Uncharacterized protein1.2e-0642.5Show/hide
Query:  MEIAALRFHSDKENLPPFTHKQFPSNP--------KKPIIRRRFNRKPLLDITNL--FENSVRFG------SIQDGFVGSVESVC-LPSNSRKRKAGDE-
        ME +A R+HS+KENLPP +     +NP        KK   + R  RKPL DITNL  + N   FG      S    F  S  SV    SNSRKRK+  E 
Subjt:  MEIAALRFHSDKENLPPFTHKQFPSNP--------KKPIIRRRFNRKPLLDITNL--FENSVRFG------SIQDGFVGSVESVC-LPSNSRKRKAGDE-

Query:  ------ICSGTAKSLRMGFR
              + S  +KSLRMGFR
Subjt:  ------ICSGTAKSLRMGFR

A0A7J7CET3 Uncharacterized protein1.8e-0741.03Show/hide
Query:  MEIAALRFHSDKENLPPF-------------THKQFPSNPKKPIIRRRFNRKPLLDITNLFENSVRFGSIQDGFVGSVESVCL-PSNSRKRKAGDE----
        + + AL  H++KEN+PPF             + + F ++ K    R+   RKPL DITNLF NSV +   +D    S  SV +  SN RKRK+ DE    
Subjt:  MEIAALRFHSDKENLPPF-------------THKQFPSNPKKPIIRRRFNRKPLLDITNLFENSVRFGSIQDGFVGSVESVCL-PSNSRKRKAGDE----

Query:  ---ICSGTAKSLRMGFR
           ICS  +KSLRMGFR
Subjt:  ---ICSGTAKSLRMGFR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATCGCCGCCCTCCGATTCCACTCCGACAAGGAAAACCTCCCGCCGTTTACCCACAAGCAATTCCCCTCAAATCCCAAGAAACCCATCATTCGAAGGAGATTCAA
TCGGAAGCCGCTTCTCGATATAACCAATTTGTTTGAAAACTCTGTTCGATTCGGTTCGATTCAAGATGGATTCGTCGGCTCCGTTGAATCGGTTTGTTTGCCGTCGAATT
CCAGGAAGAGGAAAGCTGGTGATGAAATTTGTTCTGGAACTGCCAAATCGCTCAGAATGGGATTCAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATCGCCGCCCTCCGATTCCACTCCGACAAGGAAAACCTCCCGCCGTTTACCCACAAGCAATTCCCCTCAAATCCCAAGAAACCCATCATTCGAAGGAGATTCAA
TCGGAAGCCGCTTCTCGATATAACCAATTTGTTTGAAAACTCTGTTCGATTCGGTTCGATTCAAGATGGATTCGTCGGCTCCGTTGAATCGGTTTGTTTGCCGTCGAATT
CCAGGAAGAGGAAAGCTGGTGATGAAATTTGTTCTGGAACTGCCAAATCGCTCAGAATGGGATTCAGATAA
Protein sequenceShow/hide protein sequence
MEIAALRFHSDKENLPPFTHKQFPSNPKKPIIRRRFNRKPLLDITNLFENSVRFGSIQDGFVGSVESVCLPSNSRKRKAGDEICSGTAKSLRMGFR