; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G017130 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G017130
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionE3 ubiquitin-protein ligase EL5
Genome locationchr11:25248980..25251157
RNA-Seq ExpressionLsi11G017130
SyntenyLsi11G017130
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031548.1 E3 ubiquitin-protein ligase RNF12 isoform X1 [Cucumis melo var. makuwa]3.3e-11374.1Show/hide
Query:  MSRRSTNFPPGIWQARREYDRQRYNRNDSNHTNSTSSHPHSSQVSGLTILLFCNKLYSNPTATIKAYVVILRHDFQAIKQNLEIDPVPWRPAGETMIARI
        MSRRSTNFPPGIWQARREYDRQRYNRN+SN  NST SH  S Q S                                     EIDPVPWRPAGETMI RI
Subjt:  MSRRSTNFPPGIWQARREYDRQRYNRNDSNHTNSTSSHPHSSQVSGLTILLFCNKLYSNPTATIKAYVVILRHDFQAIKQNLEIDPVPWRPAGETMIARI

Query:  LDIGRQTKEVGIADSLQEPPAIVRIITHSRLRQREASPIPAELYSPTPRSEGNSTLTSEEQHMALNKLKKKVYDPPSNTSRRISFYYRENNRGNYNERNN
        LDIG            +EPPAIVRIITHSR RQ EASPIPAELYSPTPRSEGNSTLTSEEQ+MALNKLKKKVYDPPSNTSRRI+FYYRENNR NYNER+N
Subjt:  LDIGRQTKEVGIADSLQEPPAIVRIITHSRLRQREASPIPAELYSPTPRSEGNSTLTSEEQHMALNKLKKKVYDPPSNTSRRISFYYRENNRGNYNERNN

Query:  SNSDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFE-RTARREASS--NNTVSTAPPSSLVDDELMYLIRAMEDALMLRN
        +NSDEEGK CAVCLEDFQ KEEVMTTPCNHMFHE+CIVPWVKSNGQCPVCRFTLFE RT RR ASS  NN+VS APPSSLVDDELMYLIRAME+ALMLRN
Subjt:  SNSDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFE-RTARREASS--NNTVSTAPPSSLVDDELMYLIRAMEDALMLRN

Query:  LAGFW
        +A FW
Subjt:  LAGFW

TYK07001.1 E3 ubiquitin-protein ligase RNF12 isoform X1 [Cucumis melo var. makuwa]3.9e-11474.43Show/hide
Query:  MSRRSTNFPPGIWQARREYDRQRYNRNDSNHTNSTSSHPHSSQVSGLTILLFCNKLYSNPTATIKAYVVILRHDFQAIKQNLEIDPVPWRPAGETMIARI
        MSRRSTNFPPGIWQARREYDRQRYNRN+SN  NST SH  S Q S                                     EIDPVPWRPAGETMI RI
Subjt:  MSRRSTNFPPGIWQARREYDRQRYNRNDSNHTNSTSSHPHSSQVSGLTILLFCNKLYSNPTATIKAYVVILRHDFQAIKQNLEIDPVPWRPAGETMIARI

Query:  LDIGRQTKEVGIADSLQEPPAIVRIITHSRLRQREASPIPAELYSPTPRSEGNSTLTSEEQHMALNKLKKKVYDPPSNTSRRISFYYRENNRGNYNERNN
        LDIG            +EPPAIVRIITHSR RQ EASPIPAELYSPTPRSEGNSTLTSEEQ+MALNKLKKKVYDPPSNTSRRI+FYYRENNR NYNER+N
Subjt:  LDIGRQTKEVGIADSLQEPPAIVRIITHSRLRQREASPIPAELYSPTPRSEGNSTLTSEEQHMALNKLKKKVYDPPSNTSRRISFYYRENNRGNYNERNN

Query:  SNSDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFE-RTARREASS--NNTVSTAPPSSLVDDELMYLIRAMEDALMLRN
        +NSDEEGK CAVCLEDFQPKEEVMTTPCNHMFHE+CIVPWVKSNGQCPVCRFTLFE RT RR ASS  NN+VS APPSSLVDDELMYLIRAME+ALMLRN
Subjt:  SNSDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFE-RTARREASS--NNTVSTAPPSSLVDDELMYLIRAMEDALMLRN

Query:  LAGFW
        +A FW
Subjt:  LAGFW

XP_004136838.1 E3 ubiquitin-protein ligase AIRP1 [Cucumis sativus]3.9e-11472.64Show/hide
Query:  MSRRSTNFPPGIWQARREYDRQRYNRNDSNHTNSTSSHPHSSQVSGLTILLFCNKLYSNPTATIKAYVVILRHDFQAIKQNLEIDPVPWRPAGETMIARI
        MSRRSTNFPPGIWQARRE+DRQRYNRN+SN TNST SH  S Q S                                     +IDPVPWRPAGET+I RI
Subjt:  MSRRSTNFPPGIWQARREYDRQRYNRNDSNHTNSTSSHPHSSQVSGLTILLFCNKLYSNPTATIKAYVVILRHDFQAIKQNLEIDPVPWRPAGETMIARI

Query:  LDIGRQTKEVGIADSLQEPPAIVRIITHSRLRQREASPIPAELYSPTPRSEGNSTLTSEEQHMALNKLKKKVYDPPSNTSRRISFYYRENNRGNYNERNN
        LDIG +          +EPPAIVRIITHSR RQ EASPIPAELYSPTPRSEGNSTLTSEEQ+MALNKLKKKVYDPPSNTSRRISFYYRENNR N NER+N
Subjt:  LDIGRQTKEVGIADSLQEPPAIVRIITHSRLRQREASPIPAELYSPTPRSEGNSTLTSEEQHMALNKLKKKVYDPPSNTSRRISFYYRENNRGNYNERNN

Query:  SNSDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFERTARREASS---NNTVSTAPPSSLVDDELMYLIRAMEDALMLRN
        SN DEEGKRCAVCLEDFQPKEEVMTTPCNHMFHE+CIVPWVKS+GQCPVCRFTLFERT RR ++S   NN+VS APPSSLVD+EL+YLIRAME+ALMLRN
Subjt:  SNSDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFERTARREASS---NNTVSTAPPSSLVDDELMYLIRAMEDALMLRN

Query:  LAGFWGA
        +A FWGA
Subjt:  LAGFWGA

XP_008455285.1 PREDICTED: E3 ubiquitin-protein ligase RNF12 isoform X1 [Cucumis melo]2.7e-11574.59Show/hide
Query:  MSRRSTNFPPGIWQARREYDRQRYNRNDSNHTNSTSSHPHSSQVSGLTILLFCNKLYSNPTATIKAYVVILRHDFQAIKQNLEIDPVPWRPAGETMIARI
        MSRRSTNFPPGIWQARREYDRQRYNRN+SN  NST SH  S Q S                                     EIDPVPWRPAGETMI RI
Subjt:  MSRRSTNFPPGIWQARREYDRQRYNRNDSNHTNSTSSHPHSSQVSGLTILLFCNKLYSNPTATIKAYVVILRHDFQAIKQNLEIDPVPWRPAGETMIARI

Query:  LDIGRQTKEVGIADSLQEPPAIVRIITHSRLRQREASPIPAELYSPTPRSEGNSTLTSEEQHMALNKLKKKVYDPPSNTSRRISFYYRENNRGNYNERNN
        LDIG            +EPPAIVRIITHSR RQ EASPIPAELYSPTPRSEGNSTLTSEEQ+MALNKLKKKVYDPPSNTSRRI+FYYRENNR NYNER+N
Subjt:  LDIGRQTKEVGIADSLQEPPAIVRIITHSRLRQREASPIPAELYSPTPRSEGNSTLTSEEQHMALNKLKKKVYDPPSNTSRRISFYYRENNRGNYNERNN

Query:  SNSDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFE-RTARREASS--NNTVSTAPPSSLVDDELMYLIRAMEDALMLRN
        +NSDEEGK CAVCLEDFQPKEEVMTTPCNHMFHE+CIVPWVKSNGQCPVCRFTLFE RT RR ASS  NN VS APPSSLVDDELMYLIRAME+ALMLRN
Subjt:  SNSDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFE-RTARREASS--NNTVSTAPPSSLVDDELMYLIRAMEDALMLRN

Query:  LAGFWGA
        +A FWGA
Subjt:  LAGFWGA

XP_038888228.1 uncharacterized protein LOC120078088 isoform X1 [Benincasa hispida]3.9e-12277.45Show/hide
Query:  MSRRSTNFPPGIWQARREYDRQRYNRNDSNHTNSTSSHPHSSQVSGLTILLFCNKLYSNPTATIKAYVVILRHDFQAIKQNLEIDPVPWRPAGETMIARI
        MSRRSTNFPPGIWQARREYDRQRYNRNDSN  NST SH +S Q S                                     E+DPVPWRPAGETMIARI
Subjt:  MSRRSTNFPPGIWQARREYDRQRYNRNDSNHTNSTSSHPHSSQVSGLTILLFCNKLYSNPTATIKAYVVILRHDFQAIKQNLEIDPVPWRPAGETMIARI

Query:  LDIGRQTKEVGIADSLQEPPAIVRIITHSRLRQREASPIPAELYSPTPRSEGNSTLTSEEQHMALNKLKKKVYDPPSNTSRRISFYYRENNRGNYNERNN
        LDIGR           +EPPAIVRIIT SR RQ EASPIPAELYSPTPRSEGNSTLTSEEQ+MAL KLKK VYDPPSNTSRRISFYYRENNRGNYNERNN
Subjt:  LDIGRQTKEVGIADSLQEPPAIVRIITHSRLRQREASPIPAELYSPTPRSEGNSTLTSEEQHMALNKLKKKVYDPPSNTSRRISFYYRENNRGNYNERNN

Query:  SNSDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFERTARREAS--SNNTVSTAPPSSLVDDELMYLIRAMEDALMLRNL
        SNSDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFERT RR AS  SNNTVSTAPPSSL+DD+LMYLIRAMEDALMLRNL
Subjt:  SNSDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFERTARREAS--SNNTVSTAPPSSLVDDELMYLIRAMEDALMLRNL

Query:  AGFWGA
        AGFWGA
Subjt:  AGFWGA

TrEMBL top hitse value%identityAlignment
A0A0A0K1V1 RING-type domain-containing protein1.9e-11472.64Show/hide
Query:  MSRRSTNFPPGIWQARREYDRQRYNRNDSNHTNSTSSHPHSSQVSGLTILLFCNKLYSNPTATIKAYVVILRHDFQAIKQNLEIDPVPWRPAGETMIARI
        MSRRSTNFPPGIWQARRE+DRQRYNRN+SN TNST SH  S Q S                                     +IDPVPWRPAGET+I RI
Subjt:  MSRRSTNFPPGIWQARREYDRQRYNRNDSNHTNSTSSHPHSSQVSGLTILLFCNKLYSNPTATIKAYVVILRHDFQAIKQNLEIDPVPWRPAGETMIARI

Query:  LDIGRQTKEVGIADSLQEPPAIVRIITHSRLRQREASPIPAELYSPTPRSEGNSTLTSEEQHMALNKLKKKVYDPPSNTSRRISFYYRENNRGNYNERNN
        LDIG +          +EPPAIVRIITHSR RQ EASPIPAELYSPTPRSEGNSTLTSEEQ+MALNKLKKKVYDPPSNTSRRISFYYRENNR N NER+N
Subjt:  LDIGRQTKEVGIADSLQEPPAIVRIITHSRLRQREASPIPAELYSPTPRSEGNSTLTSEEQHMALNKLKKKVYDPPSNTSRRISFYYRENNRGNYNERNN

Query:  SNSDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFERTARREASS---NNTVSTAPPSSLVDDELMYLIRAMEDALMLRN
        SN DEEGKRCAVCLEDFQPKEEVMTTPCNHMFHE+CIVPWVKS+GQCPVCRFTLFERT RR ++S   NN+VS APPSSLVD+EL+YLIRAME+ALMLRN
Subjt:  SNSDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFERTARREASS---NNTVSTAPPSSLVDDELMYLIRAMEDALMLRN

Query:  LAGFWGA
        +A FWGA
Subjt:  LAGFWGA

A0A1S3C054 E3 ubiquitin-protein ligase RNF12 isoform X11.3e-11574.59Show/hide
Query:  MSRRSTNFPPGIWQARREYDRQRYNRNDSNHTNSTSSHPHSSQVSGLTILLFCNKLYSNPTATIKAYVVILRHDFQAIKQNLEIDPVPWRPAGETMIARI
        MSRRSTNFPPGIWQARREYDRQRYNRN+SN  NST SH  S Q S                                     EIDPVPWRPAGETMI RI
Subjt:  MSRRSTNFPPGIWQARREYDRQRYNRNDSNHTNSTSSHPHSSQVSGLTILLFCNKLYSNPTATIKAYVVILRHDFQAIKQNLEIDPVPWRPAGETMIARI

Query:  LDIGRQTKEVGIADSLQEPPAIVRIITHSRLRQREASPIPAELYSPTPRSEGNSTLTSEEQHMALNKLKKKVYDPPSNTSRRISFYYRENNRGNYNERNN
        LDIG            +EPPAIVRIITHSR RQ EASPIPAELYSPTPRSEGNSTLTSEEQ+MALNKLKKKVYDPPSNTSRRI+FYYRENNR NYNER+N
Subjt:  LDIGRQTKEVGIADSLQEPPAIVRIITHSRLRQREASPIPAELYSPTPRSEGNSTLTSEEQHMALNKLKKKVYDPPSNTSRRISFYYRENNRGNYNERNN

Query:  SNSDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFE-RTARREASS--NNTVSTAPPSSLVDDELMYLIRAMEDALMLRN
        +NSDEEGK CAVCLEDFQPKEEVMTTPCNHMFHE+CIVPWVKSNGQCPVCRFTLFE RT RR ASS  NN VS APPSSLVDDELMYLIRAME+ALMLRN
Subjt:  SNSDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFE-RTARREASS--NNTVSTAPPSSLVDDELMYLIRAMEDALMLRN

Query:  LAGFWGA
        +A FWGA
Subjt:  LAGFWGA

A0A5A7SLQ9 E3 ubiquitin-protein ligase RNF12 isoform X11.6e-11374.1Show/hide
Query:  MSRRSTNFPPGIWQARREYDRQRYNRNDSNHTNSTSSHPHSSQVSGLTILLFCNKLYSNPTATIKAYVVILRHDFQAIKQNLEIDPVPWRPAGETMIARI
        MSRRSTNFPPGIWQARREYDRQRYNRN+SN  NST SH  S Q S                                     EIDPVPWRPAGETMI RI
Subjt:  MSRRSTNFPPGIWQARREYDRQRYNRNDSNHTNSTSSHPHSSQVSGLTILLFCNKLYSNPTATIKAYVVILRHDFQAIKQNLEIDPVPWRPAGETMIARI

Query:  LDIGRQTKEVGIADSLQEPPAIVRIITHSRLRQREASPIPAELYSPTPRSEGNSTLTSEEQHMALNKLKKKVYDPPSNTSRRISFYYRENNRGNYNERNN
        LDIG            +EPPAIVRIITHSR RQ EASPIPAELYSPTPRSEGNSTLTSEEQ+MALNKLKKKVYDPPSNTSRRI+FYYRENNR NYNER+N
Subjt:  LDIGRQTKEVGIADSLQEPPAIVRIITHSRLRQREASPIPAELYSPTPRSEGNSTLTSEEQHMALNKLKKKVYDPPSNTSRRISFYYRENNRGNYNERNN

Query:  SNSDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFE-RTARREASS--NNTVSTAPPSSLVDDELMYLIRAMEDALMLRN
        +NSDEEGK CAVCLEDFQ KEEVMTTPCNHMFHE+CIVPWVKSNGQCPVCRFTLFE RT RR ASS  NN+VS APPSSLVDDELMYLIRAME+ALMLRN
Subjt:  SNSDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFE-RTARREASS--NNTVSTAPPSSLVDDELMYLIRAMEDALMLRN

Query:  LAGFW
        +A FW
Subjt:  LAGFW

A0A5D3C526 E3 ubiquitin-protein ligase RNF12 isoform X11.9e-11474.43Show/hide
Query:  MSRRSTNFPPGIWQARREYDRQRYNRNDSNHTNSTSSHPHSSQVSGLTILLFCNKLYSNPTATIKAYVVILRHDFQAIKQNLEIDPVPWRPAGETMIARI
        MSRRSTNFPPGIWQARREYDRQRYNRN+SN  NST SH  S Q S                                     EIDPVPWRPAGETMI RI
Subjt:  MSRRSTNFPPGIWQARREYDRQRYNRNDSNHTNSTSSHPHSSQVSGLTILLFCNKLYSNPTATIKAYVVILRHDFQAIKQNLEIDPVPWRPAGETMIARI

Query:  LDIGRQTKEVGIADSLQEPPAIVRIITHSRLRQREASPIPAELYSPTPRSEGNSTLTSEEQHMALNKLKKKVYDPPSNTSRRISFYYRENNRGNYNERNN
        LDIG            +EPPAIVRIITHSR RQ EASPIPAELYSPTPRSEGNSTLTSEEQ+MALNKLKKKVYDPPSNTSRRI+FYYRENNR NYNER+N
Subjt:  LDIGRQTKEVGIADSLQEPPAIVRIITHSRLRQREASPIPAELYSPTPRSEGNSTLTSEEQHMALNKLKKKVYDPPSNTSRRISFYYRENNRGNYNERNN

Query:  SNSDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFE-RTARREASS--NNTVSTAPPSSLVDDELMYLIRAMEDALMLRN
        +NSDEEGK CAVCLEDFQPKEEVMTTPCNHMFHE+CIVPWVKSNGQCPVCRFTLFE RT RR ASS  NN+VS APPSSLVDDELMYLIRAME+ALMLRN
Subjt:  SNSDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFE-RTARREASS--NNTVSTAPPSSLVDDELMYLIRAMEDALMLRN

Query:  LAGFW
        +A FW
Subjt:  LAGFW

A0A6J1JPC8 E3 ubiquitin-protein ligase EL59.7e-11170.63Show/hide
Query:  MSRRSTNFPPGIWQARREYDRQRYNRNDSNHTNSTSSHPHSSQVSGLTILLFCNKLYSNPTATIKAYVVILRHDFQAIKQNLEIDPVPWRPAGETMIARI
        MSRRSTNFPPG+W+ARREYDRQRYN NDSN  +STS HP   Q S          + S PT  I         D    +   E+DP+PWRP G  MIAR+
Subjt:  MSRRSTNFPPGIWQARREYDRQRYNRNDSNHTNSTSSHPHSSQVSGLTILLFCNKLYSNPTATIKAYVVILRHDFQAIKQNLEIDPVPWRPAGETMIARI

Query:  LDIGRQTKEVGIADSLQEPPAIVRIITHSRLRQREASPIPAELYSPTPRSEGNSTLTSEEQHMALNKLKKKVYDPPSNTSRRISFYYRENNRGNYNERNN
        L+I  Q         L++PPAIVRIITHSR RQ EAS  PAELY PTPRSEGNSTLTSEEQ+MALNKLKKKVYDPP+N SRRISFYYRENNR NYNER N
Subjt:  LDIGRQTKEVGIADSLQEPPAIVRIITHSRLRQREASPIPAELYSPTPRSEGNSTLTSEEQHMALNKLKKKVYDPPSNTSRRISFYYRENNRGNYNERNN

Query:  SNSDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFERTARREASSNNTVSTAPPSSLVDDELMYLIRAMEDALMLRNLAG
          +DE+GKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKS+GQCP CRFTLFERT RREASSNNT S A  S+LVDDEL+YLIRAMED+LMLRNL G
Subjt:  SNSDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFERTARREASSNNTVSTAPPSSLVDDELMYLIRAMEDALMLRNLAG

Query:  FWG
         WG
Subjt:  FWG

SwissProt top hitse value%identityAlignment
Q91YL2 E3 ubiquitin-protein ligase RNF1262.4e-1040.51Show/hide
Query:  GKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLF-ERTARRE--------ASSNNTVSTAPPSS
        G  C VC ED+   E V   PCNH+FH+ CIVPW++ +  CPVCR +L  + TA           +SS+++ S++ PS+
Subjt:  GKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLF-ERTARRE--------ASSNNTVSTAPPSS

Q940T5 E3 ubiquitin-protein ligase RDUF26.4e-1147.62Show/hide
Query:  CAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFERTARREASSNNTVSTA
        CAVC E F+ + E    PC H+FH++CIVPW+     CPVCRF L     RR  S+NN    A
Subjt:  CAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFERTARREASSNNTVSTA

Q9C1X4 Uncharacterized RING finger protein P32A8.03c8.4e-1138.36Show/hide
Query:  DEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFERTARREASSNNTVSTAPPSS
        DEEG+ C +C+E F+  ++V+  PC H FHE CI PW++ NG C +CR  +   + +R  +S ++ +   PS+
Subjt:  DEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFERTARREASSNNTVSTAPPSS

Q9D0C1 E3 ubiquitin-protein ligase RNF1151.1e-1044.93Show/hide
Query:  GKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTL-----FERTARREASSNNTVS
        G  C VC ED+  +E+V   PCNH FH  CIVPW++ +  CPVCR +L       +T   EAS++N  S
Subjt:  GKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTL-----FERTARREASSNNTVS

Q9Y4L5 E3 ubiquitin-protein ligase RNF1154.9e-1147.46Show/hide
Query:  GKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFERTARREASS
        G  C VC ED+  +EEV   PCNH FH  CIVPW++ +  CPVCR +L    + R++ S
Subjt:  GKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFERTARREASS

Arabidopsis top hitse value%identityAlignment
AT1G55530.1 RING/U-box superfamily protein2.3e-1140.28Show/hide
Query:  EEGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFERTARREA----SSNNTVSTA
        EE  +C+VCL+DF+   E    PC H FH +C++PW++ +  CPVCR+ L    A+ ++    S NN  S+A
Subjt:  EEGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFERTARREA----SSNNTVSTA

AT2G44330.1 RING/U-box superfamily protein1.7e-1142.86Show/hide
Query:  NNSNSDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTL
        ++++SD+    CA+C EDF   E     PCNH++H +CI+PW+ S+  CP+CR  L
Subjt:  NNSNSDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTL

AT3G58720.1 RING/U-box superfamily protein2.6e-3139.58Show/hide
Query:  PPAIVR----IITHSRLRQREASPIPAELYSPTPRSEGNSTLTSE--EQHMALNKLKKKVYD--PPSNTSRRISFYYRENNRGNYNERNNSN--SDEEGK
        PP+  R    I   + LR++    +   +++ + R E +S  +S+  E+   L  L K+ Y+  P S   R +S YYR  N G+ + RN  N   +E+ K
Subjt:  PPAIVR----IITHSRLRQREASPIPAELYSPTPRSEGNSTLTSE--EQHMALNKLKKKVYD--PPSNTSRRISFYYRENNRGNYNERNNSN--SDEEGK

Query:  RCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFERTARRE---ASSNNTVSTAPPSSLVDDELMYLIRAMEDALMLRN
        RC+VCLEDF+PKE VM TPC HMFHEECIVPW+K+ GQCPVCRF + + T +     A+ +N       + L   EL+ ++RAME+  +  N
Subjt:  RCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFERTARRE---ASSNNTVSTAPPSSLVDDELMYLIRAMEDALMLRN

AT3G58720.2 RING/U-box superfamily protein2.6e-3139.58Show/hide
Query:  PPAIVR----IITHSRLRQREASPIPAELYSPTPRSEGNSTLTSE--EQHMALNKLKKKVYD--PPSNTSRRISFYYRENNRGNYNERNNSN--SDEEGK
        PP+  R    I   + LR++    +   +++ + R E +S  +S+  E+   L  L K+ Y+  P S   R +S YYR  N G+ + RN  N   +E+ K
Subjt:  PPAIVR----IITHSRLRQREASPIPAELYSPTPRSEGNSTLTSE--EQHMALNKLKKKVYD--PPSNTSRRISFYYRENNRGNYNERNNSN--SDEEGK

Query:  RCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFERTARRE---ASSNNTVSTAPPSSLVDDELMYLIRAMEDALMLRN
        RC+VCLEDF+PKE VM TPC HMFHEECIVPW+K+ GQCPVCRF + + T +     A+ +N       + L   EL+ ++RAME+  +  N
Subjt:  RCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFERTARRE---ASSNNTVSTAPPSSLVDDELMYLIRAMEDALMLRN

AT5G59550.1 zinc finger (C3HC4-type RING finger) family protein4.6e-1247.62Show/hide
Query:  CAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFERTARREASSNNTVSTA
        CAVC E F+ + E    PC H+FH++CIVPW+     CPVCRF L     RR  S+NN    A
Subjt:  CAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFERTARREASSNNTVSTA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAGACGTTCTACTAATTTTCCTCCAGGAATTTGGCAGGCCAGAAGGGAATATGATCGCCAGAGATATAACAGAAATGATTCAAACCATACGAACTCTACATCGTC
GCATCCTCATTCATCTCAGGTCAGCGGGTTAACAATTCTTTTGTTTTGCAACAAACTGTATTCCAATCCCACGGCCACCATCAAAGCTTATGTTGTTATTCTACGCCATG
ATTTTCAGGCCATAAAACAGAACTTAGAGATAGATCCAGTTCCATGGCGACCTGCTGGGGAGACAATGATTGCAAGAATATTGGACATCGGGAGGCAAACCAAAGAAGTT
GGTATTGCAGATTCACTTCAAGAACCACCTGCAATAGTCAGAATCATCACACACTCCAGACTGAGACAGCGTGAGGCCAGTCCAATACCTGCGGAGCTGTACTCGCCAAC
TCCAAGATCCGAAGGGAACTCGACGCTAACATCTGAAGAGCAACATATGGCACTGAATAAGCTCAAGAAAAAAGTGTATGATCCTCCGAGTAACACAAGTAGGAGAATAA
GCTTCTATTACAGAGAGAATAACAGAGGAAATTACAATGAGAGGAACAACAGCAACAGTGATGAAGAAGGCAAGAGATGCGCCGTTTGCCTTGAAGATTTCCAGCCAAAA
GAGGAGGTGATGACAACGCCCTGCAACCATATGTTCCACGAAGAATGCATAGTTCCATGGGTGAAGAGCAATGGCCAATGTCCGGTCTGCAGATTTACCTTGTTCGAGCG
AACAGCTCGAAGAGAAGCTTCGTCCAACAACACTGTATCAACTGCGCCGCCTAGTAGCCTAGTCGACGACGAGCTCATGTACTTGATACGAGCCATGGAAGATGCTCTGA
TGCTGCGAAATCTGGCCGGATTTTGGGGAGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCAGACGTTCTACTAATTTTCCTCCAGGAATTTGGCAGGCCAGAAGGGAATATGATCGCCAGAGATATAACAGAAATGATTCAAACCATACGAACTCTACATCGTC
GCATCCTCATTCATCTCAGGTCAGCGGGTTAACAATTCTTTTGTTTTGCAACAAACTGTATTCCAATCCCACGGCCACCATCAAAGCTTATGTTGTTATTCTACGCCATG
ATTTTCAGGCCATAAAACAGAACTTAGAGATAGATCCAGTTCCATGGCGACCTGCTGGGGAGACAATGATTGCAAGAATATTGGACATCGGGAGGCAAACCAAAGAAGTT
GGTATTGCAGATTCACTTCAAGAACCACCTGCAATAGTCAGAATCATCACACACTCCAGACTGAGACAGCGTGAGGCCAGTCCAATACCTGCGGAGCTGTACTCGCCAAC
TCCAAGATCCGAAGGGAACTCGACGCTAACATCTGAAGAGCAACATATGGCACTGAATAAGCTCAAGAAAAAAGTGTATGATCCTCCGAGTAACACAAGTAGGAGAATAA
GCTTCTATTACAGAGAGAATAACAGAGGAAATTACAATGAGAGGAACAACAGCAACAGTGATGAAGAAGGCAAGAGATGCGCCGTTTGCCTTGAAGATTTCCAGCCAAAA
GAGGAGGTGATGACAACGCCCTGCAACCATATGTTCCACGAAGAATGCATAGTTCCATGGGTGAAGAGCAATGGCCAATGTCCGGTCTGCAGATTTACCTTGTTCGAGCG
AACAGCTCGAAGAGAAGCTTCGTCCAACAACACTGTATCAACTGCGCCGCCTAGTAGCCTAGTCGACGACGAGCTCATGTACTTGATACGAGCCATGGAAGATGCTCTGA
TGCTGCGAAATCTGGCCGGATTTTGGGGAGCATGAAGCGCCATCTCGATTTTTCACCTGAAATCAACATGCAAAATGCTCTAAATTTGAAGGAATGATGAAATCCGATCT
CTAAAAATTAATGTTGTGCTTTGAACATGAAATAATTCGACGAGAGATCTCATTGTGCCAATAAAAGCATCCTCTCGCCGATGACATATTCGATCGATTGAGTTTCTTCA
TGATCTTGCGCTATAATTCTTCATCCCCATTGCTGAATCAAATGTGATGTTCTTGAAATTCTTGGCGCCAAACTTATATATTTCTGTAGATGACCTGCAATTTTTTTTTT
TTTTTTTAAAAAAACGAAATTGAACCGTTTCTTCACATCAAAGCTTTCTAATATCTTACTAGTGGAATTTTTGTACGATGACTCCTTTTGAGTTTGAACGCCTATTTTTC
GCTTTTTACTTATGTTATTATTGAAT
Protein sequenceShow/hide protein sequence
MSRRSTNFPPGIWQARREYDRQRYNRNDSNHTNSTSSHPHSSQVSGLTILLFCNKLYSNPTATIKAYVVILRHDFQAIKQNLEIDPVPWRPAGETMIARILDIGRQTKEV
GIADSLQEPPAIVRIITHSRLRQREASPIPAELYSPTPRSEGNSTLTSEEQHMALNKLKKKVYDPPSNTSRRISFYYRENNRGNYNERNNSNSDEEGKRCAVCLEDFQPK
EEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFTLFERTARREASSNNTVSTAPPSSLVDDELMYLIRAMEDALMLRNLAGFWGA