CuGenDBv2

Gene ID	LsiUNG000180
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	GTPase
Genome location	chr00:311974..315772
RNA-Seq Expression	LsiUNG000180
Synteny	LsiUNG000180
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6571645.1 hypothetical protein SDJN03_28373, partial [Cucurbita argyrosperma subsp. sororia]

3.8e-78

74.62

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Query:  MVLWEIALATAYFLGLKRTFKLALKTQRRLVSPKYPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVSTNLGSWISRWLTRTKPSAETHEHPNGTINPGM
        MVLWEIALATAYFLGLKRTFKL LKTQRRLVSP +PRIR+FL  RTRA+FDVT+K H+TI+ +DIKV  N+ SWIS+WL RTKPSA  H+HP+GT N GM
Subjt:  MVLWEIALATAYFLGLKRTFKLALKTQRRLVSPKYPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVSTNLGSWISRWLTRTKPSAETHEHPNGTINPGM

Query:  KMIKKVSNSYLKHQASSRAVIGQKFDQYLSSTSSVHRWPKPFFPTIAMIMRQRKPVGTLNQHRQFSICGSDGLKTNYRRRSFDDDIREDIRQWMLQN
        KMIK+VSNSY+KH+AS+RA IGQK D+YLS TSSVH WPK  FPTIAMIMRQRKP GT+NQHRQFSIC S+G+KTNYRR  F+  IR+DI+QWM++N
Subjt:  KMIKKVSNSYLKHQASSRAVIGQKFDQYLSSTSSVHRWPKPFFPTIAMIMRQRKPVGTLNQHRQFSICGSDGLKTNYRRRSFDDDIREDIRQWMLQN

KAG7011374.1 hypothetical protein SDJN02_26279, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.9e-79

75.13

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Query:  MVLWEIALATAYFLGLKRTFKLALKTQRRLVSPKYPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVSTNLGSWISRWLTRTKPSAETHEHPNGTINPGM
        MVLWEIALATAYFLGLKRTFKL LKTQRRLVSP +PRIR+FL  RTRA+FDVT+K H+TI+ +DIKV  N+ SWIS+WL RTKPSA  H+HP+GT N GM
Subjt:  MVLWEIALATAYFLGLKRTFKLALKTQRRLVSPKYPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVSTNLGSWISRWLTRTKPSAETHEHPNGTINPGM

Query:  KMIKKVSNSYLKHQASSRAVIGQKFDQYLSSTSSVHRWPKPFFPTIAMIMRQRKPVGTLNQHRQFSICGSDGLKTNYRRRSFDDDIREDIRQWMLQN
        KMIK+VSNSY+KHQAS+RA IGQK D+YLS TSSVHRWPK  FPTIAMIMRQRKP GT+NQHRQFSIC S+G+KTNY+R  F+  IR+DI+QWM++N
Subjt:  KMIKKVSNSYLKHQASSRAVIGQKFDQYLSSTSSVHRWPKPFFPTIAMIMRQRKPVGTLNQHRQFSICGSDGLKTNYRRRSFDDDIREDIRQWMLQN

XP_004136200.1 uncharacterized protein LOC101212537 [Cucumis sativus]

1.5e-90

85.79

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Query:  MVLWEIALATAYFLGLKRTFKLALKTQRRLVSPKYPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVSTNLGSWISRWLTRTKPSAETHEHPNGTINPGM
        MVLWEIALAT YFLGLKR FKLALKTQRR+VSPKYPRIRQFLRGRTRAVFDVTVKVHQTI+RQDIKV+ NL SWISRWL R KPSAET EHP+G+IN GM
Subjt:  MVLWEIALATAYFLGLKRTFKLALKTQRRLVSPKYPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVSTNLGSWISRWLTRTKPSAETHEHPNGTINPGM

Query:  KMIKKVSNSYLKHQASSRAVIGQKFDQYLSSTSSVHRWPKPFFPTIAMIMRQRKPVGTLNQHRQFSICGSDGLKTNYRRRSFDDDIREDIRQWMLQN
        KM+KKVSNSYLKH+AS+RAVIGQKFDQYL+STSSVHRWPKPFFPTIAMIMRQRKP G + QHRQFSICGS GLKTN RRR FD  IREDI QWM+QN
Subjt:  KMIKKVSNSYLKHQASSRAVIGQKFDQYLSSTSSVHRWPKPFFPTIAMIMRQRKPVGTLNQHRQFSICGSDGLKTNYRRRSFDDDIREDIRQWMLQN

XP_008466006.1 PREDICTED: uncharacterized protein LOC103503568 [Cucumis melo]

2.3e-91

87.31

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Query:  MVLWEIALATAYFLGLKRTFKLALKTQRRLVSPKYPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVSTNLGSWISRWLTRTKPSAETHEHPNGTINPGM
        MVLWEIALAT YFLGLKRTFKL LKTQRRLVSP+YPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIK   NLGSWISRWL R+KPSAET EHPNGT+N GM
Subjt:  MVLWEIALATAYFLGLKRTFKLALKTQRRLVSPKYPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVSTNLGSWISRWLTRTKPSAETHEHPNGTINPGM

Query:  KMIKKVSNSYLKHQASSRAVIGQKFDQYLSSTSSVHRWPKPFFPTIAMIMRQRKPVGTLNQHRQFSICGSDGLKTNYRRRSFDDDIREDIRQWMLQN
        KMIKKVSNSYLKH+AS+RAVIGQKFDQYLSSTSSVHRWPKPFFPTIAMIMRQRKP G + QHRQFSI GS GLKTN RRR FD  IREDI QWM+QN
Subjt:  KMIKKVSNSYLKHQASSRAVIGQKFDQYLSSTSSVHRWPKPFFPTIAMIMRQRKPVGTLNQHRQFSICGSDGLKTNYRRRSFDDDIREDIRQWMLQN

XP_038888705.1 uncharacterized protein LOC120078506 [Benincasa hispida]

1.3e-97

91.88

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Query:  MVLWEIALATAYFLGLKRTFKLALKTQRRLVSPKYPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVSTNLGSWISRWLTRTKPSAETHEHPNGTINPGM
        MVLWEIALATAYFLGLKRTFKLALKTQRRLVSPK+PRIRQFLRGRTRAVFDV+VKVH TIQRQDIKVST L SWISRWL + KPSAETHEHPNGTIN GM
Subjt:  MVLWEIALATAYFLGLKRTFKLALKTQRRLVSPKYPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVSTNLGSWISRWLTRTKPSAETHEHPNGTINPGM

Query:  KMIKKVSNSYLKHQASSRAVIGQKFDQYLSSTSSVHRWPKPFFPTIAMIMRQRKPVGTLNQHRQFSICGSDGLKTNYRRRSFDDDIREDIRQWMLQN
        KMIKKVSNSYLKHQ SSRAVIG+KFDQYLSSTSSVHRWPKPFFPTIAMIMRQRKP GTLNQ+RQFSICGSDGLKTNYRRRSFD  IREDI QWMLQN
Subjt:  KMIKKVSNSYLKHQASSRAVIGQKFDQYLSSTSSVHRWPKPFFPTIAMIMRQRKPVGTLNQHRQFSICGSDGLKTNYRRRSFDDDIREDIRQWMLQN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LH53 Uncharacterized protein

7.2e-91

85.79

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Query:  MVLWEIALATAYFLGLKRTFKLALKTQRRLVSPKYPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVSTNLGSWISRWLTRTKPSAETHEHPNGTINPGM
        MVLWEIALAT YFLGLKR FKLALKTQRR+VSPKYPRIRQFLRGRTRAVFDVTVKVHQTI+RQDIKV+ NL SWISRWL R KPSAET EHP+G+IN GM
Subjt:  MVLWEIALATAYFLGLKRTFKLALKTQRRLVSPKYPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVSTNLGSWISRWLTRTKPSAETHEHPNGTINPGM

Query:  KMIKKVSNSYLKHQASSRAVIGQKFDQYLSSTSSVHRWPKPFFPTIAMIMRQRKPVGTLNQHRQFSICGSDGLKTNYRRRSFDDDIREDIRQWMLQN
        KM+KKVSNSYLKH+AS+RAVIGQKFDQYL+STSSVHRWPKPFFPTIAMIMRQRKP G + QHRQFSICGS GLKTN RRR FD  IREDI QWM+QN
Subjt:  KMIKKVSNSYLKHQASSRAVIGQKFDQYLSSTSSVHRWPKPFFPTIAMIMRQRKPVGTLNQHRQFSICGSDGLKTNYRRRSFDDDIREDIRQWMLQN

A0A1S3CRP2 uncharacterized protein LOC103503568

1.1e-91

87.31

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Query:  MVLWEIALATAYFLGLKRTFKLALKTQRRLVSPKYPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVSTNLGSWISRWLTRTKPSAETHEHPNGTINPGM
        MVLWEIALAT YFLGLKRTFKL LKTQRRLVSP+YPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIK   NLGSWISRWL R+KPSAET EHPNGT+N GM
Subjt:  MVLWEIALATAYFLGLKRTFKLALKTQRRLVSPKYPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVSTNLGSWISRWLTRTKPSAETHEHPNGTINPGM

Query:  KMIKKVSNSYLKHQASSRAVIGQKFDQYLSSTSSVHRWPKPFFPTIAMIMRQRKPVGTLNQHRQFSICGSDGLKTNYRRRSFDDDIREDIRQWMLQN
        KMIKKVSNSYLKH+AS+RAVIGQKFDQYLSSTSSVHRWPKPFFPTIAMIMRQRKP G + QHRQFSI GS GLKTN RRR FD  IREDI QWM+QN
Subjt:  KMIKKVSNSYLKHQASSRAVIGQKFDQYLSSTSSVHRWPKPFFPTIAMIMRQRKPVGTLNQHRQFSICGSDGLKTNYRRRSFDDDIREDIRQWMLQN

A0A6J1DZV3 uncharacterized protein LOC111025863 isoform X1

1.2e-72

72.59

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Query:  MVLWEIALATAYFLGLKRTFKLALKTQRRLVSPKYPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVSTNLGSWISRWLTRTKPSAETHEHPNGTINPGM
        MVLWEI LATAYFLGLKRT+KLALK QRRLVSPK+PRIRQFLRGRTR++FDV VKVHQ +Q QDI+V  N G+ I +WL + KPSAE  EH +G I  GM
Subjt:  MVLWEIALATAYFLGLKRTFKLALKTQRRLVSPKYPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVSTNLGSWISRWLTRTKPSAETHEHPNGTINPGM

Query:  KMIKKVSNSYLKHQASSRAVIGQKFDQYLSSTSSVHRWPKPFFPTIAMIMRQRKPVGTLNQHRQFSICGSDGLKTNYRRRSFDDDIREDIRQWMLQN
        KMIK+VSNSYLKH+AS RAVI QKFDQY+S TSS+ RWPKP FPT AMIMRQ KP GT  Q+RQ+SICGS+ ++TNYRR SFD  IREDI QWML++
Subjt:  KMIKKVSNSYLKHQASSRAVIGQKFDQYLSSTSSVHRWPKPFFPTIAMIMRQRKPVGTLNQHRQFSICGSDGLKTNYRRRSFDDDIREDIRQWMLQN

A0A6J1HFJ9 uncharacterized protein LOC111463851

2.4e-78

74.62

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Query:  MVLWEIALATAYFLGLKRTFKLALKTQRRLVSPKYPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVSTNLGSWISRWLTRTKPSAETHEHPNGTINPGM
        MVLWEIALATAYFLGLKRTFKL LKTQRRLVSP +PRIR+FL  RTRA+FDVT+K H+TI+ +DIKV  N+ SWIS+WL RTKPSA  H+HP+GT N GM
Subjt:  MVLWEIALATAYFLGLKRTFKLALKTQRRLVSPKYPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVSTNLGSWISRWLTRTKPSAETHEHPNGTINPGM

Query:  KMIKKVSNSYLKHQASSRAVIGQKFDQYLSSTSSVHRWPKPFFPTIAMIMRQRKPVGTLNQHRQFSICGSDGLKTNYRRRSFDDDIREDIRQWMLQN
        KMIK+VSNSY+KH+AS+RA IGQK D+YLS TSSVH WPK  FPTIAMIMRQRKP GT+NQHRQFSIC S+G+KTNYRR  F+  IR+DI+QWM++N
Subjt:  KMIKKVSNSYLKHQASSRAVIGQKFDQYLSSTSSVHRWPKPFFPTIAMIMRQRKPVGTLNQHRQFSICGSDGLKTNYRRRSFDDDIREDIRQWMLQN

A0A6J1HU73 uncharacterized protein LOC111466890

7.7e-77

73.98

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Query:  MVLWEIALATAYFLGLKRTFKLALKTQRRLVSPKYPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVSTNLGSWISRWLTRTKPSAETHEHPNGTINPGM
        MVLWEIALATAYFLGLKRTFKL LKTQRRLVSP +PRIR+FL  RTRA+FDVT+K H+TIQ +DIKV  ++ SWIS+WL R KPSA  H+HP+GT N GM
Subjt:  MVLWEIALATAYFLGLKRTFKLALKTQRRLVSPKYPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVSTNLGSWISRWLTRTKPSAETHEHPNGTINPGM

Query:  KMIKKVSNSYLKHQASSRAVIGQKFDQYLSSTSSVHRWPKPFFPTIAMIMRQRKPVGTLNQHRQFSICGSDGLKTNYRRRSFDDDIREDIRQWMLQ
        KMIK+VSNSY+KH+AS+RA IGQK D+YLS TSSVHRWPK  FPTIAMI RQRKP GT+NQHRQFSIC S+G+KTNYRR  F+  IR+DI+QWM++
Subjt:  KMIKKVSNSYLKHQASSRAVIGQKFDQYLSSTSSVHRWPKPFFPTIAMIMRQRKPVGTLNQHRQFSICGSDGLKTNYRRRSFDDDIREDIRQWMLQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G32260.1 unknown protein

1.3e-36

43.2

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Query:  MVLWEIALATAYFLGLKRTFKLALKTQRRLVSPKYPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVSTNLGSWISRWLTRTKPSAETHEHPNGTINPGM
        MV WEI L TAYFLGL+RT++LALK QRRLV+PK+P+IRQFL  RTR +FDV + VH+ IQ +DI+V  NLG+WI RWL + KP+A+    P    N   
Subjt:  MVLWEIALATAYFLGLKRTFKLALKTQRRLVSPKYPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVSTNLGSWISRWLTRTKPSAETHEHPNGTINPGM

Query:  KMIKKVSNSYL----KHQASSRAVIGQKFDQYLSSTSSVHRWPKPFFPTIAMIMRQRKPVGTLNQHRQFSICGSDGLKTNYRRRS------FDDDIREDI
         M K    + L     H  +++    ++ D++L  TS  H   KP FP+++M+++  +P GT  Q+R +    S GL  +  + S      F+  +R+DI
Subjt:  KMIKKVSNSYL----KHQASSRAVIGQKFDQYLSSTSSVHRWPKPFFPTIAMIMRQRKPVGTLNQHRQFSICGSDGLKTNYRRRS------FDDDIREDI

Query:  RQWMLQ
         QWM Q
Subjt:  RQWMLQ

AT2G35480.1 unknown protein

1.9e-35

42.13

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Query:  MVLWEIALATAYFLGLKRTFKLALKTQRRLVSPKYPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVSTNLGSWISRWLTRTKPSAETHEHPNGTINPGM
        MVLWE+AL TAYFLG++RT++LALKTQRRLVSPK+PRIR F+  RT  +FD+ ++VH+ IQ++D+ +  NLG+WI R L R KPSA+     N    P +
Subjt:  MVLWEIALATAYFLGLKRTFKLALKTQRRLVSPKYPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVSTNLGSWISRWLTRTKPSAETHEHPNGTINPGM

Query:  KMIKKV-SNSYLKHQASSRAVIGQKFDQYLSSTSSVHRWPKPFFPTIAMIMRQRKPVGTLNQHRQFSICGSDGLKTNYRRRSFDDDIREDIRQWMLQ
           K+V  ++ LK   +++    ++ D+ L  +    R   P      M+++  +  GT  Q+R +S+  S  +K  Y R  F+  IR+DI QWM+Q
Subjt:  KMIKKV-SNSYLKHQASSRAVIGQKFDQYLSSTSSVHRWPKPFFPTIAMIMRQRKPVGTLNQHRQFSICGSDGLKTNYRRRSFDDDIREDIRQWMLQ

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTGTTATGGGAGATTGCATTGGCAACAGCCTATTTCTTGGGCCTCAAGCGAACCTTTAAGCTCGCTCTCAAGACTCAGCGACGTCTTGTTTCCCCCAAATACCCTCG
AATTCGTCAATTTCTTCGCGGACGGACCCGTGCCGTGTTTGATGTTACTGTGAAAGTTCATCAGACCATTCAGCGTCAAGACATAAAAGTTAGTACAAATCTTGGTAGCT
GGATTTCGCGATGGCTTACTCGAACGAAACCATCTGCTGAGACTCATGAACATCCCAATGGCACTATCAACCCAGGCATGAAAATGATAAAGAAGGTTTCCAACTCCTAC
TTGAAACATCAAGCCAGCAGTCGAGCAGTGATTGGTCAAAAATTCGATCAATATCTGTCATCTACTTCATCAGTACACAGATGGCCTAAGCCCTTCTTCCCTACCATTGC
AATGATCATGAGGCAGAGAAAGCCTGTTGGGACTTTGAATCAACACAGACAATTTAGCATTTGTGGCTCTGATGGATTGAAAACAAACTACAGAAGACGAAGTTTCGATG
ACGATATTCGAGAAGATATCAGGCAGTGGATGCTCCAAAATTAG

mRNA sequence

Show/hide mRNA sequence

TTTTGCTTACATTTCTTAAACCGAAGACGAAGAAGAAGATGAAGAAGCAAAAGAAGAAAAGCAAAGCGAGTGAAAATGGTGTTATGGGAGATTGCATTGGCAACAGCCTA
TTTCTTGGGCCTCAAGCGAACCTTTAAGCTCGCTCTCAAGACTCAGCGACGTCTTGTTTCCCCCAAATACCCTCGAATTCGTCAATTTCTTCGCGGACGGACCCGTGCCG
TGTTTGATGTTACTGTGAAAGTTCATCAGACCATTCAGCGTCAAGACATAAAAGTTAGTACAAATCTTGGTAGCTGGATTTCGCGATGGCTTACTCGAACGAAACCATCT
GCTGAGACTCATGAACATCCCAATGGCACTATCAACCCAGGCATGAAAATGATAAAGAAGGTTTCCAACTCCTACTTGAAACATCAAGCCAGCAGTCGAGCAGTGATTGG
TCAAAAATTCGATCAATATCTGTCATCTACTTCATCAGTACACAGATGGCCTAAGCCCTTCTTCCCTACCATTGCAATGATCATGAGGCAGAGAAAGCCTGTTGGGACTT
TGAATCAACACAGACAATTTAGCATTTGTGGCTCTGATGGATTGAAAACAAACTACAGAAGACGAAGTTTCGATGACGATATTCGAGAAGATATCAGGCAGTGGATGCTC
CAAAATTAGAAGAGAAGATTCTTTTCTAGCTGTCTTCTCCTTGGAGACTAGATTATTTGGCTTACAATACAGTCTATAGTGTAGTGTTTAGTTTCCAATTTTGAGCTTGG
AGACAATAGAGAGCTTTTCTTTTCTTGTTTTAAAATGTTTGGAACATGTTATTGGAAGCCATGTCTTTGCTTATGAATAATTTCTAAAGGTAATGTTAATTTTCAAATAC
TTACGTTTTAGGTAGTTAACAATGCATATCTGCTGGAAGTTATGTATCAATACCGATGAAATTGCTGAGGTCTCAATTTTATGGAAACGACTATGGAAATATCAATAAGT
TTTATTATTTATATG

Protein sequence

Show/hide protein sequence

MVLWEIALATAYFLGLKRTFKLALKTQRRLVSPKYPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVSTNLGSWISRWLTRTKPSAETHEHPNGTINPGMKMIKKVSNSY
LKHQASSRAVIGQKFDQYLSSTSSVHRWPKPFFPTIAMIMRQRKPVGTLNQHRQFSICGSDGLKTNYRRRSFDDDIREDIRQWMLQN

LsiUNG000180 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome