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LsiUNG000370 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsiUNG000370
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionNADH dehydrogenase I subunit 2
Genome locationchr00:614937..620318
RNA-Seq ExpressionLsiUNG000370
SyntenyLsiUNG000370
Gene Ontology termsGO:0006302 - double-strand break repair (biological process)
GO:0051321 - meiotic cell cycle (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0030870 - Mre11 complex (cellular component)
GO:0004520 - endodeoxyribonuclease activity (molecular function)
GO:0008296 - 3'-5'-exodeoxyribonuclease activity (molecular function)
GO:0030145 - manganese ion binding (molecular function)
InterPro domainsIPR022546 - Uncharacterised protein family Ycf68


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN73774.1 hypothetical protein VITISV_008784 [Vitis vinifera]6.1e-1262.86Show/hide
Query:  ILLKERGAFRNADTGGAWLSSARVNPEQTTGDKPEEGEDDIKSSTLYAFSNTRTTMAGTKGCDPVRTQLF
        ILLKERGAF NADTGGAWLSSA      T  DKPEEGEDD+     YA  +TR TM GTKG D  R   F
Subjt:  ILLKERGAFRNADTGGAWLSSARVNPEQTTGDKPEEGEDDIKSSTLYAFSNTRTTMAGTKGCDPVRTQLF
KAF1855823.1 hypothetical protein Lal_00045186 [Lupinus albus]2.0e-1566.23Show/hide
Query:  ILLKERGAFRNADTGGAWLSSARV-----------NPEQTTGDKPEEGEDDIKSSTLYAFSNTRTTMAGTKGCDPVR
        ILLKERGAF NADTGGAWLSSAR            NP +T GDKPEEGEDD+KSS  YA  +TR TMAGTK  DP R
Subjt:  ILLKERGAFRNADTGGAWLSSARV-----------NPEQTTGDKPEEGEDDIKSSTLYAFSNTRTTMAGTKGCDPVR
KAF1876761.1 hypothetical protein Lal_00044212 [Lupinus albus]2.0e-1575Show/hide
Query:  ILLKERGAFRNADTGGAWLSSARVNPEQTTGDKPEEGEDDIKSSTLYAFSNTRTTMAGTKGCDP
        ILLKERGAF NADTGGAWLSSAR     T GDKPEEGEDD+KSS  YA  +TR TMAGTK  DP
Subjt:  ILLKERGAFRNADTGGAWLSSARVNPEQTTGDKPEEGEDDIKSSTLYAFSNTRTTMAGTKGCDP
QCE14666.1 NADH dehydrogenase I subunit 2 [Vigna unguiculata]1.7e-0950Show/hide
Query:  ILLKERGAFRNADTGGAWLSSARVNPEQTTGDKPEEGEDDIKSSTLYAFSNTRTTMAGTKGCDPVRTQLFVNGYWEND----QATLKF
        ILLKERGAF NADTGGAWLSSAR     T GDKPEEGEDD+KSS      +  T++     C        ++GY + D    +AT K+
Subjt:  ILLKERGAFRNADTGGAWLSSARVNPEQTTGDKPEEGEDDIKSSTLYAFSNTRTTMAGTKGCDPVRTQLFVNGYWEND----QATLKF
QHN86533.1 uncharacterized protein DS421_16g547110 [Arachis hypogaea]4.1e-1674.24Show/hide
Query:  ILLKERGAFRNADTGGAWLSSARVNPEQTTGDKPEEGEDDIKSSTLYAFSNTRTTMAGTKGCDPVR
        ILLKERGAF NADTGGAWLSSAR     T GDKPEEGEDD+KSS  YA  +TR TMAGTK  DP R
Subjt:  ILLKERGAFRNADTGGAWLSSARVNPEQTTGDKPEEGEDDIKSSTLYAFSNTRTTMAGTKGCDPVR
TrEMBL top hitse value%identityAlignment
A0A6A5L8C7 Uncharacterized protein ycf689.8e-1666.23Show/hide
Query:  ILLKERGAFRNADTGGAWLSSARV-----------NPEQTTGDKPEEGEDDIKSSTLYAFSNTRTTMAGTKGCDPVR
        ILLKERGAF NADTGGAWLSSAR            NP +T GDKPEEGEDD+KSS  YA  +TR TMAGTK  DP R
Subjt:  ILLKERGAFRNADTGGAWLSSARV-----------NPEQTTGDKPEEGEDDIKSSTLYAFSNTRTTMAGTKGCDPVR
A0A6A5MP59 Uncharacterized protein ycf689.8e-1675Show/hide
Query:  ILLKERGAFRNADTGGAWLSSARVNPEQTTGDKPEEGEDDIKSSTLYAFSNTRTTMAGTKGCDP
        ILLKERGAF NADTGGAWLSSAR     T GDKPEEGEDD+KSS  YA  +TR TMAGTK  DP
Subjt:  ILLKERGAFRNADTGGAWLSSARVNPEQTTGDKPEEGEDDIKSSTLYAFSNTRTTMAGTKGCDP
A0A6N2MWA8 Uncharacterized protein ycf688.0e-1863.53Show/hide
Query:  ILLKERGAFRNADTGGAWLSSARVNPEQTTGDKPEEGEDDIKSSTLYAFSNTRTTMAGTKGCDPVR--TQLFVNGYWENDQATLK
        ILLKERGAF NADTGGAWLSSAR     T GDKPEEGEDD+KSS  YA  +TR TMAGTKG DP R  T+L   G   N ++ ++
Subjt:  ILLKERGAFRNADTGGAWLSSARVNPEQTTGDKPEEGEDDIKSSTLYAFSNTRTTMAGTKGCDPVR--TQLFVNGYWENDQATLK
A0A6N2N9U7 Uncharacterized protein ycf681.6e-1060.87Show/hide
Query:  ILLKERGAFRNADTGGAWLSSARVNPEQTTGDKPEEGEDDIKSSTLYAFSNTRTTMAGTKGCDPVRTQL
        ILLKERGAF NADTGGAWLSSAR     T GDKPEEGEDD+KSS  YA++       G +   P   QL
Subjt:  ILLKERGAFRNADTGGAWLSSARVNPEQTTGDKPEEGEDDIKSSTLYAFSNTRTTMAGTKGCDPVRTQL
A5ATL8 Uncharacterized protein ycf683.0e-1262.86Show/hide
Query:  ILLKERGAFRNADTGGAWLSSARVNPEQTTGDKPEEGEDDIKSSTLYAFSNTRTTMAGTKGCDPVRTQLF
        ILLKERGAF NADTGGAWLSSA      T  DKPEEGEDD+     YA  +TR TM GTKG D  R   F
Subjt:  ILLKERGAFRNADTGGAWLSSARVNPEQTTGDKPEEGEDDIKSSTLYAFSNTRTTMAGTKGCDPVRTQLF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGTCTCGTATTTCTTGAAAAAGCGATTCCCAATCCTCTTGAAAGAGAGGGGTGCATTCAGGAATGCAGACACAGGTGGTGCATGGCTATCGTCAGCTCGTGTCAA
CCCTGAGCAGACTACCGGTGATAAGCCGGAGGAAGGTGAGGATGACATCAAGTCATCTACCCTTTATGCCTTCAGCAACACACGTACTACAATGGCCGGGACAAAGGGTT
GTGATCCCGTGAGGACACAATTATTTGTGAACGGATATTGGGAGAACGATCAGGCTACACTAAAGTTTGAGGATTATAAGTATGAAAAGTTTGAGGCGGTGGTGACAAGC
TTAAATGAGGAAAATGCCATGTTGAAGTCAACAGTTTCGGGTTTCCAAGATCAATTGACTGAAATCAGAAGACAGTTAGGTATGCAACAAAGGCAAGGAGACGGGCTTTC
GAACAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATGTCTCGTATTTCTTGAAAAAGCGATTCCCAATCCTCTTGAAAGAGAGGGGTGCATTCAGGAATGCAGACACAGGTGGTGCATGGCTATCGTCAGCTCGTGTCAA
CCCTGAGCAGACTACCGGTGATAAGCCGGAGGAAGGTGAGGATGACATCAAGTCATCTACCCTTTATGCCTTCAGCAACACACGTACTACAATGGCCGGGACAAAGGGTT
GTGATCCCGTGAGGACACAATTATTTGTGAACGGATATTGGGAGAACGATCAGGCTACACTAAAGTTTGAGGATTATAAGTATGAAAAGTTTGAGGCGGTGGTGACAAGC
TTAAATGAGGAAAATGCCATGTTGAAGTCAACAGTTTCGGGTTTCCAAGATCAATTGACTGAAATCAGAAGACAGTTAGGTATGCAACAAAGGCAAGGAGACGGGCTTTC
GAACAACTAG
Protein sequenceShow/hide protein sequence
MNVSYFLKKRFPILLKERGAFRNADTGGAWLSSARVNPEQTTGDKPEEGEDDIKSSTLYAFSNTRTTMAGTKGCDPVRTQLFVNGYWENDQATLKFEDYKYEKFEAVVTS
LNEENAMLKSTVSGFQDQLTEIRRQLGMQQRQGDGLSNN