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LsiUNG000410 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsiUNG000410
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionFAM50A-like protein
Genome locationchr00:738717..747665
RNA-Seq ExpressionLsiUNG000410
SyntenyLsiUNG000410
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN60386.1 hypothetical protein Csa_000782 [Cucumis sativus]1.6e-6984.8Show/hide
Query:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN
        ME+VQNQHV           MDQ+KDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAST KQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN
Subjt:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN

Query:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLETPSHSEPPTERLISKTAKKVLGRRNWKADARKK
        ISRG+EE SCNSSNMAA+TSTSESQLQC+ SNVDPQLETPSHS+ P E+L+S+TAKKV GRRNWKADARKK
Subjt:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLETPSHSEPPTERLISKTAKKVLGRRNWKADARKK

XP_022155993.1 uncharacterized protein LOC111022965 [Momordica charantia]3.0e-7184.57Show/hide
Query:  TFLNMENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEA
        TFL MENVQN+ V ET+ SFPMK +DQ KD RIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQP QTGTYFQPNGIANNPLTRVHC+RNWKK+A
Subjt:  TFLNMENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEA

Query:  RSANISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLETPSHSEPPTERLISKTAKKVLGRRNWKADARKK
        RS ++SRGL EASCNSSNMAARTSTSESQ+QC+ SN +PQLET SH EPP E+LIS+TAKKVLGRRNWKADARKK
Subjt:  RSANISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLETPSHSEPPTERLISKTAKKVLGRRNWKADARKK

XP_022963572.1 uncharacterized protein LOC111463869 [Cucurbita moschata]2.1e-6983.63Show/hide
Query:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN
        ME VQN+HVAE ESSFPMK  DQEK  RIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAST+K P QTGTYFQPNG+ANNPLTRVHCSRNWKKEAR+A+
Subjt:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN

Query:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLETPSHSEPPTERLISKTAKKVLGRRNWKADARKK
        +SRGLEEASCNSSNMAA++STSE Q+QC  S+ +PQ ET SHSEPPTE+L+S+TAKKVLGRRNWKADARKK
Subjt:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLETPSHSEPPTERLISKTAKKVLGRRNWKADARKK

XP_022967395.1 uncharacterized protein LOC111466937 [Cucurbita maxima]5.6e-7084.21Show/hide
Query:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN
        ME VQN+HVAE ESSFPMK  DQEK  RIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAST+K P QTGTYFQPNG+ANNPLTRVHCSRNWKKEAR+A+
Subjt:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN

Query:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLETPSHSEPPTERLISKTAKKVLGRRNWKADARKK
        +SRGLEEASCNSSNMAA++STSE Q+QC  SN +PQ ET SHSEPPTE+L+S+TAKKVLGRRNWKADARKK
Subjt:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLETPSHSEPPTERLISKTAKKVLGRRNWKADARKK

XP_038886879.1 uncharacterized protein LOC120077088 [Benincasa hispida]4.7e-7792.44Show/hide
Query:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN
        MENVQNQHVA TE SFPMK M+QEKDNRI+NDIMTRRLKNRERQRRYRARKRLEEEI+KAST+KQPIQTGTYFQPNG  NNPL+RVHCSRNWKKEARSAN
Subjt:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN

Query:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLETPSHSEPPTERLISKTAKKVLGRRNWKADARKKN
        ISRGLEEASCNSSNMAARTSTSESQLQCI SNVDPQLETPSHSEPPTE LIS+TAKKVLGRRNWKADARKKN
Subjt:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLETPSHSEPPTERLISKTAKKVLGRRNWKADARKKN

TrEMBL top hitse value%identityAlignment
A0A0A0LK46 Uncharacterized protein7.9e-7084.8Show/hide
Query:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN
        ME+VQNQHV           MDQ+KDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAST KQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN
Subjt:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN

Query:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLETPSHSEPPTERLISKTAKKVLGRRNWKADARKK
        ISRG+EE SCNSSNMAA+TSTSESQLQC+ SNVDPQLETPSHS+ P E+L+S+TAKKV GRRNWKADARKK
Subjt:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLETPSHSEPPTERLISKTAKKVLGRRNWKADARKK

A0A1S3CQ53 uncharacterized protein LOC1035035458.7e-6984.21Show/hide
Query:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN
        ME+VQNQHV           MDQ+K NRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAS  KQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN
Subjt:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN

Query:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLETPSHSEPPTERLISKTAKKVLGRRNWKADARKK
        ISRG+EEASCNSSNMAARTSTSESQLQC+ SNVDPQLETPSHS+ P ++L+S+TAKKV GRRNWKADARKK
Subjt:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLETPSHSEPPTERLISKTAKKVLGRRNWKADARKK

A0A6J1DPD8 uncharacterized protein LOC1110229651.4e-7184.57Show/hide
Query:  TFLNMENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEA
        TFL MENVQN+ V ET+ SFPMK +DQ KD RIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQP QTGTYFQPNGIANNPLTRVHC+RNWKK+A
Subjt:  TFLNMENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEA

Query:  RSANISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLETPSHSEPPTERLISKTAKKVLGRRNWKADARKK
        RS ++SRGL EASCNSSNMAARTSTSESQ+QC+ SN +PQLET SH EPP E+LIS+TAKKVLGRRNWKADARKK
Subjt:  RSANISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLETPSHSEPPTERLISKTAKKVLGRRNWKADARKK

A0A6J1HFL3 uncharacterized protein LOC1114638691.0e-6983.63Show/hide
Query:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN
        ME VQN+HVAE ESSFPMK  DQEK  RIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAST+K P QTGTYFQPNG+ANNPLTRVHCSRNWKKEAR+A+
Subjt:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN

Query:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLETPSHSEPPTERLISKTAKKVLGRRNWKADARKK
        +SRGLEEASCNSSNMAA++STSE Q+QC  S+ +PQ ET SHSEPPTE+L+S+TAKKVLGRRNWKADARKK
Subjt:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLETPSHSEPPTERLISKTAKKVLGRRNWKADARKK

A0A6J1HUC8 uncharacterized protein LOC1114669372.7e-7084.21Show/hide
Query:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN
        ME VQN+HVAE ESSFPMK  DQEK  RIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAST+K P QTGTYFQPNG+ANNPLTRVHCSRNWKKEAR+A+
Subjt:  MENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN

Query:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLETPSHSEPPTERLISKTAKKVLGRRNWKADARKK
        +SRGLEEASCNSSNMAA++STSE Q+QC  SN +PQ ET SHSEPPTE+L+S+TAKKVLGRRNWKADARKK
Subjt:  ISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLETPSHSEPPTERLISKTAKKVLGRRNWKADARKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G32630.1 unknown protein4.1e-1042.72Show/hide
Query:  EKDNRIDND-IMTRRLKNRERQRRYRARKRLEEE------------IKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN-ISRGLEEAS
        EK+  ID D +M RR+KNRERQRRYRARKR+ EE            + K    ++  +   +  P+G   N + RV+C RNWKKEAR A+ I    +++S
Subjt:  EKDNRIDND-IMTRRLKNRERQRRYRARKRLEEE------------IKKASTVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSAN-ISRGLEEAS

Query:  CNS
        C S
Subjt:  CNS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCTATACCTTTCACCTTCTTCCATCTTCTCCTTCAACACTTTCAATCAACGGGTACAGATCTTCATTTTCGAAGTTAAACGGTTGAGAGATGGCGATGAAGCAGT
GATTAGCATTTTTATTGCTTCAAATACTACTTTCCTCAATATGGAAAATGTGCAAAATCAGCATGTTGCTGAAACAGAAAGTAGTTTTCCGATGAAGCGCATGGATCAAG
AAAAAGACAATAGAATAGACAATGATATCATGACTCGTCGACTGAAGAATCGAGAAAGGCAACGCAGATATAGAGCCCGGAAACGTCTAGAAGAAGAAATAAAGAAAGCT
TCAACTGTAAAACAACCAATTCAGACAGGAACATATTTTCAACCAAATGGCATTGCAAACAATCCCTTGACTCGGGTGCATTGTAGCCGAAATTGGAAGAAGGAAGCAAG
AAGTGCCAATATATCTAGGGGGTTAGAAGAAGCCTCTTGTAATAGTTCCAATATGGCTGCAAGAACATCAACCAGTGAGAGTCAACTGCAATGCATACTCTCTAACGTCG
ATCCACAATTAGAAACGCCATCACACTCGGAGCCACCTACTGAACGACTCATCTCTAAAACAGCAAAAAAGGTGCTTGGTCGAAGAAATTGGAAAGCAGATGCGAGAAAG
AAGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTCTATACCTTTCACCTTCTTCCATCTTCTCCTTCAACACTTTCAATCAACGGGTACAGATCTTCATTTTCGAAGTTAAACGGTTGAGAGATGGCGATGAAGCAGT
GATTAGCATTTTTATTGCTTCAAATACTACTTTCCTCAATATGGAAAATGTGCAAAATCAGCATGTTGCTGAAACAGAAAGTAGTTTTCCGATGAAGCGCATGGATCAAG
AAAAAGACAATAGAATAGACAATGATATCATGACTCGTCGACTGAAGAATCGAGAAAGGCAACGCAGATATAGAGCCCGGAAACGTCTAGAAGAAGAAATAAAGAAAGCT
TCAACTGTAAAACAACCAATTCAGACAGGAACATATTTTCAACCAAATGGCATTGCAAACAATCCCTTGACTCGGGTGCATTGTAGCCGAAATTGGAAGAAGGAAGCAAG
AAGTGCCAATATATCTAGGGGGTTAGAAGAAGCCTCTTGTAATAGTTCCAATATGGCTGCAAGAACATCAACCAGTGAGAGTCAACTGCAATGCATACTCTCTAACGTCG
ATCCACAATTAGAAACGCCATCACACTCGGAGCCACCTACTGAACGACTCATCTCTAAAACAGCAAAAAAGGTGCTTGGTCGAAGAAATTGGAAAGCAGATGCGAGAAAG
AAGAATTGA
Protein sequenceShow/hide protein sequence
MTLYLSPSSIFSFNTFNQRVQIFIFEVKRLRDGDEAVISIFIASNTTFLNMENVQNQHVAETESSFPMKRMDQEKDNRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKA
STVKQPIQTGTYFQPNGIANNPLTRVHCSRNWKKEARSANISRGLEEASCNSSNMAARTSTSESQLQCILSNVDPQLETPSHSEPPTERLISKTAKKVLGRRNWKADARK
KN