; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

LsiUNG000680 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsiUNG000680
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationchr00:1678991..1679752
RNA-Seq ExpressionLsiUNG000680
SyntenyLsiUNG000680
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_010514765.2 PREDICTED: uncharacterized protein LOC104790682 [Camelina sativa]3.0e-8341.35Show/hide
Query:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL
        DFDVARD HAPDS+ELLRRQGIDF RNR +G+ S RFAELMMSSGLVCN+ VSWVTFHSAYD+GYL+KILT+R LP  + EF  V+RV FG+ VYD+K++
Subjt:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL

Query:  MRFCE-SLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGXD----------------------------------
        M+FCE  LYGGLDR+A+ L+VNR VGKCHQAGSDSLLTWHAFQ+MRD YF Q+  +KHAG+LYG +                                  
Subjt:  MRFCE-SLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGXD----------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------EFLGVLRVFFGDNVYDMKYLMRFCE-SLYGGLDRIAKILNVNR
                                                                 EF  V+RV FG+ VYD+K++M+FCE  LYGGLDR+A+ L+VNR
Subjt:  ---------------------------------------------------------EFLGVLRVFFGDNVYDMKYLMRFCE-SLYGGLDRIAKILNVNR

Query:  AVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEVF
         VGKCHQAGSDSLLTWHAFQ+MRD YF Q+  +KHAG+LYGLEVF
Subjt:  AVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEVF

XP_022142408.1 probable CCR4-associated factor 1 homolog 11 [Momordica charantia]1.9e-8289.16Show/hide
Query:  MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKY
        MDFDVARD+HAPDSIELLRRQGIDF+RNRVEGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVK+LT+RSLP R++EFLGVLRVFFGD VYD+KY
Subjt:  MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKY

Query:  LMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGXD
        +MRFC+SLYGGLDRIAKILNV+RAVGKCHQAGSDSLLTWHAFQKMRDTYFVQN ++KHAGVLYG +
Subjt:  LMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGXD

XP_022945861.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita moschata]2.5e-8287.5Show/hide
Query:  MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKY
        MDFD+ARD++APDSI+LLRRQGIDF+RNRVEGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILTQ+SLP+R+DEFLGVLRV FGDNVYD+KY
Subjt:  MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKY

Query:  LMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGXDEF
        +MRFC+SLYGGLDRIAK LNVNRAVGKCHQAGSDSLLTWHAFQKMRDT+FVQNEV+KHAGVLYG + F
Subjt:  LMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGXDEF

XP_023541056.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita pepo subsp. pepo]2.5e-8287.5Show/hide
Query:  MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKY
        MDFD+ARD++APDSI+LLRRQGIDF+RNRVEGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILTQ+SLP+R+DEFLGVLRV FGDNVYD+KY
Subjt:  MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKY

Query:  LMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGXDEF
        +MRFC+SLYGGLDRIAK LNVNRAVGKCHQAGSDSLLTWHAFQKMRDT+FVQNEV+KHAGVLYG + F
Subjt:  LMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGXDEF

XP_038877224.1 probable CCR4-associated factor 1 homolog 11 [Benincasa hispida]6.2e-8996.43Show/hide
Query:  MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKY
        MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCN+SVSWVTFHSAYDFGYLVKILTQR LPDRVDEFLGVLRVFFGDNVYDMKY
Subjt:  MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKY

Query:  LMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGXDEF
        LMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNE+QKHAGVLYG + F
Subjt:  LMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGXDEF

TrEMBL top hitse value%identityAlignment
A0A1S3CJQ2 Poly(A)-specific ribonuclease1.5e-8086.83Show/hide
Query:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL
        DFDVARD HAPDSIELLRRQGIDF RNR EGIDSSRFAELMMSSGLVCN+SVSWVTFHSAYDFGYLVKILTQ+ LP  ++EFLGV+RVFFGDNVYDMKY+
Subjt:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL

Query:  MRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGXDEF
        MRFC+SLYGGLDRIAK +NVNRAVGKCHQAGSDSLLTWHAFQKMRDT+FV+NE+ KHAGVLYG + F
Subjt:  MRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGXDEF

A0A5A7T1W0 Poly(A)-specific ribonuclease1.5e-8086.83Show/hide
Query:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL
        DFDVARD HAPDSIELLRRQGIDF RNR EGIDSSRFAELMMSSGLVCN+SVSWVTFHSAYDFGYLVKILTQ+ LP  ++EFLGV+RVFFGDNVYDMKY+
Subjt:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL

Query:  MRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGXDEF
        MRFC+SLYGGLDRIAK +NVNRAVGKCHQAGSDSLLTWHAFQKMRDT+FV+NE+ KHAGVLYG + F
Subjt:  MRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGXDEF

A0A6J1CN71 Poly(A)-specific ribonuclease9.3e-8389.16Show/hide
Query:  MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKY
        MDFDVARD+HAPDSIELLRRQGIDF+RNRVEGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVK+LT+RSLP R++EFLGVLRVFFGD VYD+KY
Subjt:  MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKY

Query:  LMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGXD
        +MRFC+SLYGGLDRIAKILNV+RAVGKCHQAGSDSLLTWHAFQKMRDTYFVQN ++KHAGVLYG +
Subjt:  LMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGXD

A0A6J1G223 Poly(A)-specific ribonuclease1.2e-8287.5Show/hide
Query:  MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKY
        MDFD+ARD++APDSI+LLRRQGIDF+RNRVEGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILTQ+SLP+R+DEFLGVLRV FGDNVYD+KY
Subjt:  MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKY

Query:  LMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGXDEF
        +MRFC+SLYGGLDRIAK LNVNRAVGKCHQAGSDSLLTWHAFQKMRDT+FVQNEV+KHAGVLYG + F
Subjt:  LMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGXDEF

A0A6J1HU54 Poly(A)-specific ribonuclease2.1e-8287.5Show/hide
Query:  MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKY
        MDFD+ARD++APDSI+LLRRQGIDF+RNRVEGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILTQ+ LP+RVDEFLGVLRV FGDNVYD+KY
Subjt:  MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKY

Query:  LMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGXDEF
        +MRFC+SLYGGLDRIAK LNVNRAVGKCHQAGSDSLLTWHAFQKMRDT+FVQNEV+KHAGVLYG + F
Subjt:  LMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGXDEF

SwissProt top hitse value%identityAlignment
Q9FMS6 Probable CCR4-associated factor 1 homolog 111.4e-7276.79Show/hide
Query:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL
        DFDV RD HAPDSIELLRR GIDF RNR EG++S RFAELMMSSGL+CN+SVSWVTFHSAYDFGYLVKILT+R LP  + EFLG+LR FFGD VYD+K++
Subjt:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL

Query:  MRFCES-LYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGXDEF
        MRFCE  LYGGLDR+A+ L VNRAVGKCHQAGSDSLLTW AFQ+MRD YFV++  +KHAGVLYG + F
Subjt:  MRFCES-LYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGXDEF

Q9LEU4 Probable CCR4-associated factor 1 homolog 103.9e-4655.21Show/hide
Query:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL
        +F++  D++A +SIELLR+ GIDF +N  +GID  RF ELMMSSG+V ND++SWVTFH  YDFGYLVK+LT + LP +  +F  +L V+F   VYD+K+L
Subjt:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL

Query:  MRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYG
        M FC  L+GGL+R+A+++ V R VG CHQAGSDSLLT  +F+K+++ YF     +K+ GVLYG
Subjt:  MRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYG

Q9LXM2 Probable CCR4-associated factor 1 homolog 92.3e-7074.4Show/hide
Query:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL
        DFDVARD HAPDSIELLRRQGIDF RN  +G++S RFAELMMSSGLVCN+ VSWVTFHSAYDFGYL+KILT+R LP  + EF  V+RV FG+ VYD+K++
Subjt:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL

Query:  MRFCE-SLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGXDEF
        M+FCE  L+GGLDR+A+ L VNRAVGKCHQAGSDSLLTWHAFQ+MRD YFVQ+  +KHAGVLYG + F
Subjt:  MRFCE-SLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGXDEF

Q9SAI2 Probable CCR4-associated factor 1 homolog 62.7e-4755.83Show/hide
Query:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL
        +FD+  D+ A DSIELL++ GID  +N ++GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT ++LPD   +F  ++ V+F   VYD+K+L
Subjt:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL

Query:  MRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYG
        M+FC SL+GGL+++A++L V R VG CHQAGSDSLLT   F+K+++ +FV   + K++GVLYG
Subjt:  MRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYG

Q9SKZ2 Probable CCR4-associated factor 1 homolog 72.7e-4755.83Show/hide
Query:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL
        +FD+  D++A DSIELLR+ GIDF +N   GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT ++LP+    F  ++ V+F   VYD+K+L
Subjt:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL

Query:  MRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYG
        M+FC SL+GGL+++A++L+V R VG CHQAGSDSLLT   F+K+++ +F+   ++K++GVLYG
Subjt:  MRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYG

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.9e-4855.83Show/hide
Query:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL
        +FD+  D+ A DSIELL++ GID  +N ++GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT ++LPD   +F  ++ V+F   VYD+K+L
Subjt:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL

Query:  MRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYG
        M+FC SL+GGL+++A++L V R VG CHQAGSDSLLT   F+K+++ +FV   + K++GVLYG
Subjt:  MRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYG

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.9e-4855.83Show/hide
Query:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL
        +FD+  D+ A DSIELL++ GID  +N ++GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT ++LPD   +F  ++ V+F   VYD+K+L
Subjt:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL

Query:  MRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYG
        M+FC SL+GGL+++A++L V R VG CHQAGSDSLLT   F+K+++ +FV   + K++GVLYG
Subjt:  MRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYG

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein6.6e-4954.19Show/hide
Query:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL
        +FD+  D+ A DSIELL++ GID  +N ++GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT ++LPD   +F  ++ V+F   VYD+K+L
Subjt:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL

Query:  MRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGXDEFLGVLRVFFGDNV
        M+FC SL+GGL+++A++L V R VG CHQAGSDSLLT   F+K+++ +FV   + K++GVLYG    LGV     G NV
Subjt:  MRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGXDEFLGVLRVFFGDNV

AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.6e-7174.4Show/hide
Query:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL
        DFDVARD HAPDSIELLRRQGIDF RN  +G++S RFAELMMSSGLVCN+ VSWVTFHSAYDFGYL+KILT+R LP  + EF  V+RV FG+ VYD+K++
Subjt:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL

Query:  MRFCE-SLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGXDEF
        M+FCE  L+GGLDR+A+ L VNRAVGKCHQAGSDSLLTWHAFQ+MRD YFVQ+  +KHAGVLYG + F
Subjt:  MRFCE-SLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGXDEF

AT5G22250.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.0e-7376.79Show/hide
Query:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL
        DFDV RD HAPDSIELLRR GIDF RNR EG++S RFAELMMSSGL+CN+SVSWVTFHSAYDFGYLVKILT+R LP  + EFLG+LR FFGD VYD+K++
Subjt:  DFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYL

Query:  MRFCES-LYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGXDEF
        MRFCE  LYGGLDR+A+ L VNRAVGKCHQAGSDSLLTW AFQ+MRD YFV++  +KHAGVLYG + F
Subjt:  MRFCES-LYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGXDEF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTTCGACGTGGCGCGTGACCTCCACGCTCCCGATTCCATCGAGCTTCTCCGCCGCCAGGGCATCGACTTCAACCGGAATCGGGTGGAAGGGATCGACTCGTCCCG
CTTCGCCGAGTTGATGATGTCATCCGGACTCGTTTGTAACGACTCAGTGAGTTGGGTGACGTTTCACAGCGCCTACGATTTTGGGTATTTGGTTAAGATTTTGACTCAGC
GAAGCCTTCCAGATCGGGTAGACGAATTCCTCGGCGTTCTTAGGGTTTTCTTCGGCGATAACGTGTACGATATGAAGTACTTGATGCGGTTCTGTGAGAGTCTCTACGGC
GGTTTGGACCGGATTGCCAAGATTCTGAACGTGAACCGGGCGGTTGGAAAGTGCCATCAGGCCGGGTCTGATAGCTTGTTGACGTGGCATGCGTTTCAGAAGATGAGAGA
TACTTATTTTGTACAGAATGAGGTGCAGAAACATGCTGGGGTACTCTATGGATNAGACGAATTCCTCGGCGTTCTTAGGGTTTTCTTCGGCGATAACGTGTACGATATGA
AGTACTTGATGCGGTTCTGTGAGAGTCTCTACGGCGGTTTGGACCGGATTGCCAAGATTCTGAACGTGAACCGGGCGGTTGGAAAGTGCCATCAGGCCGGGTCTGATAGC
TTGTTGACGTGGCATGCGTTTCAGAAGATGAGAGATACTTATTTTGTACAGAATGAGGTGCAGAAACATGCTGGGGTACTCTATGGATTAGAGGTCTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACTTCGACGTGGCGCGTGACCTCCACGCTCCCGATTCCATCGAGCTTCTCCGCCGCCAGGGCATCGACTTCAACCGGAATCGGGTGGAAGGGATCGACTCGTCCCG
CTTCGCCGAGTTGATGATGTCATCCGGACTCGTTTGTAACGACTCAGTGAGTTGGGTGACGTTTCACAGCGCCTACGATTTTGGGTATTTGGTTAAGATTTTGACTCAGC
GAAGCCTTCCAGATCGGGTAGACGAATTCCTCGGCGTTCTTAGGGTTTTCTTCGGCGATAACGTGTACGATATGAAGTACTTGATGCGGTTCTGTGAGAGTCTCTACGGC
GGTTTGGACCGGATTGCCAAGATTCTGAACGTGAACCGGGCGGTTGGAAAGTGCCATCAGGCCGGGTCTGATAGCTTGTTGACGTGGCATGCGTTTCAGAAGATGAGAGA
TACTTATTTTGTACAGAATGAGGTGCAGAAACATGCTGGGGTACTCTATGGATNAGACGAATTCCTCGGCGTTCTTAGGGTTTTCTTCGGCGATAACGTGTACGATATGA
AGTACTTGATGCGGTTCTGTGAGAGTCTCTACGGCGGTTTGGACCGGATTGCCAAGATTCTGAACGTGAACCGGGCGGTTGGAAAGTGCCATCAGGCCGGGTCTGATAGC
TTGTTGACGTGGCATGCGTTTCAGAAGATGAGAGATACTTATTTTGTACAGAATGAGGTGCAGAAACATGCTGGGGTACTCTATGGATTAGAGGTCTTCTAA
Protein sequenceShow/hide protein sequence
MDFDVARDLHAPDSIELLRRQGIDFNRNRVEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQRSLPDRVDEFLGVLRVFFGDNVYDMKYLMRFCESLYG
GLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTYFVQNEVQKHAGVLYGXDEFLGVLRVFFGDNVYDMKYLMRFCESLYGGLDRIAKILNVNRAVGKCHQAGSDS
LLTWHAFQKMRDTYFVQNEVQKHAGVLYGLEVF