; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

LsiUNG000890 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsiUNG000890
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTumor necrosis factor alpha-induced protein like
Genome locationchr00:2551613..2554314
RNA-Seq ExpressionLsiUNG000890
SyntenyLsiUNG000890
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144465.1 uncharacterized protein LOC101212399 isoform X2 [Cucumis sativus]3.1e-8892.35Show/hide
Query:  MGKKRGGTRRSSAAELLETPPLTPTPASDSPKSAIFNRKMNSNGCKFSSPENTNIAKNRVPAGLFKSPSRNTSSLSTISDLKDFASSQLLDLKRHIDHSH
        MGKKRGGTRRSSAAELLETPPLTP PA+DSPKSAIFNRKMNS GCK SSPENTN+AKN+VPAGLFKS  RN SSLS+ISDLKDFASSQLLDLKRHIDHSH
Subjt:  MGKKRGGTRRSSAAELLETPPLTPTPASDSPKSAIFNRKMNSNGCKFSSPENTNIAKNRVPAGLFKSPSRNTSSLSTISDLKDFASSQLLDLKRHIDHSH

Query:  SQIVKDLDSSNSRLQKRFKFQNQACQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEQESASRACKTSITELSQSFERSIDALRSRFGISST
        SQIVKDLDSSNSRLQKRFK Q Q CQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHE+ESASRACKTSITELSQSFERSIDALRSRFGI ST
Subjt:  SQIVKDLDSSNSRLQKRFKFQNQACQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEQESASRACKTSITELSQSFERSIDALRSRFGISST

XP_008460430.1 PREDICTED: uncharacterized protein LOC103499240 isoform X2 [Cucumis melo]3.4e-8791.33Show/hide
Query:  MGKKRGGTRRSSAAELLETPPLTPTPASDSPKSAIFNRKMNSNGCKFSSPENTNIAKNRVPAGLFKSPSRNTSSLSTISDLKDFASSQLLDLKRHIDHSH
        MGKKRGGTRRSSAAELLETPPLTP PA+DSPKSAIFNRK NS GCKFSSPENTNIAKN+VPAGLFKS  RN SSLS+ISDLKDFASSQLLDLKRHIDHSH
Subjt:  MGKKRGGTRRSSAAELLETPPLTPTPASDSPKSAIFNRKMNSNGCKFSSPENTNIAKNRVPAGLFKSPSRNTSSLSTISDLKDFASSQLLDLKRHIDHSH

Query:  SQIVKDLDSSNSRLQKRFKFQNQACQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEQESASRACKTSITELSQSFERSIDALRSRFGISST
        SQIVKDLDSSNSRLQKRFK Q+Q CQKMMDEAEKEYKKM+QRIHESQEAMKASYEEFLAHE+ESASRACKT ITELSQ FERSIDALRSRFGI+ST
Subjt:  SQIVKDLDSSNSRLQKRFKFQNQACQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEQESASRACKTSITELSQSFERSIDALRSRFGISST

XP_011651686.1 uncharacterized protein LOC101212399 isoform X1 [Cucumis sativus]7.6e-8791.88Show/hide
Query:  MGKKRGGTRRSSAAELLETPPLTPTPASDSPKSAIFNRKMNSNGCKFSSPENTNIAKNRVPAGLFKSPSRNTSSLSTISDLKDFASSQLLDLKRHIDHSH
        MGKKRGGTRRSSAAELLETPPLTP PA+DSPKSAIFNRKMNS GCK SSPENTN+AKN+VPAGLFKS  RN SSLS+ISDLKDFASSQLLDLKRHIDHSH
Subjt:  MGKKRGGTRRSSAAELLETPPLTPTPASDSPKSAIFNRKMNSNGCKFSSPENTNIAKNRVPAGLFKSPSRNTSSLSTISDLKDFASSQLLDLKRHIDHSH

Query:  SQIVKDLDSSNSRLQKRFKFQNQACQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEQESASR-ACKTSITELSQSFERSIDALRSRFGISST
        SQIVKDLDSSNSRLQKRFK Q Q CQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHE+ESASR ACKTSITELSQSFERSIDALRSRFGI ST
Subjt:  SQIVKDLDSSNSRLQKRFKFQNQACQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEQESASR-ACKTSITELSQSFERSIDALRSRFGISST

XP_038887829.1 uncharacterized protein LOC120077835 isoform X1 [Benincasa hispida]5.3e-8892.89Show/hide
Query:  MGKKRGGTRRSSAAELLETPPLTPTPASDSPKSAIFNRKMNSNGCKFSSPENTNIAKNRVPAGLFKSPSRNTSSLSTISDLKDFASSQLLDLKRHIDHSH
        MGKKRGGTRRSSAAELLETPPLTP PA+DSPKSAIFNRK NSNGCKFSSPENTNIAKNRVPA LFK PSRNTSSLSTISDLKDFASSQLLDLKRHIDHSH
Subjt:  MGKKRGGTRRSSAAELLETPPLTPTPASDSPKSAIFNRKMNSNGCKFSSPENTNIAKNRVPAGLFKSPSRNTSSLSTISDLKDFASSQLLDLKRHIDHSH

Query:  SQIVKDLDSSNSRLQKRFKFQNQACQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEQESASR-ACKTSITELSQSFERSIDALRSRFGISST
        SQIVKDLDSSNS LQKRFK Q+QACQKMMDEAEKEYKKMSQRI+ESQE MKAS+EEFL HEQESASR ACK SITELSQSFERSIDALRSRFGISST
Subjt:  SQIVKDLDSSNSRLQKRFKFQNQACQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEQESASR-ACKTSITELSQSFERSIDALRSRFGISST

XP_038887830.1 uncharacterized protein LOC120077835 isoform X2 [Benincasa hispida]2.1e-8993.37Show/hide
Query:  MGKKRGGTRRSSAAELLETPPLTPTPASDSPKSAIFNRKMNSNGCKFSSPENTNIAKNRVPAGLFKSPSRNTSSLSTISDLKDFASSQLLDLKRHIDHSH
        MGKKRGGTRRSSAAELLETPPLTP PA+DSPKSAIFNRK NSNGCKFSSPENTNIAKNRVPA LFK PSRNTSSLSTISDLKDFASSQLLDLKRHIDHSH
Subjt:  MGKKRGGTRRSSAAELLETPPLTPTPASDSPKSAIFNRKMNSNGCKFSSPENTNIAKNRVPAGLFKSPSRNTSSLSTISDLKDFASSQLLDLKRHIDHSH

Query:  SQIVKDLDSSNSRLQKRFKFQNQACQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEQESASRACKTSITELSQSFERSIDALRSRFGISST
        SQIVKDLDSSNS LQKRFK Q+QACQKMMDEAEKEYKKMSQRI+ESQE MKAS+EEFL HEQESASRACK SITELSQSFERSIDALRSRFGISST
Subjt:  SQIVKDLDSSNSRLQKRFKFQNQACQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEQESASRACKTSITELSQSFERSIDALRSRFGISST

TrEMBL top hitse value%identityAlignment
A0A0A0LCH5 Uncharacterized protein1.5e-8892.35Show/hide
Query:  MGKKRGGTRRSSAAELLETPPLTPTPASDSPKSAIFNRKMNSNGCKFSSPENTNIAKNRVPAGLFKSPSRNTSSLSTISDLKDFASSQLLDLKRHIDHSH
        MGKKRGGTRRSSAAELLETPPLTP PA+DSPKSAIFNRKMNS GCK SSPENTN+AKN+VPAGLFKS  RN SSLS+ISDLKDFASSQLLDLKRHIDHSH
Subjt:  MGKKRGGTRRSSAAELLETPPLTPTPASDSPKSAIFNRKMNSNGCKFSSPENTNIAKNRVPAGLFKSPSRNTSSLSTISDLKDFASSQLLDLKRHIDHSH

Query:  SQIVKDLDSSNSRLQKRFKFQNQACQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEQESASRACKTSITELSQSFERSIDALRSRFGISST
        SQIVKDLDSSNSRLQKRFK Q Q CQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHE+ESASRACKTSITELSQSFERSIDALRSRFGI ST
Subjt:  SQIVKDLDSSNSRLQKRFKFQNQACQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEQESASRACKTSITELSQSFERSIDALRSRFGISST

A0A1S3CCJ9 uncharacterized protein LOC103499240 isoform X21.7e-8791.33Show/hide
Query:  MGKKRGGTRRSSAAELLETPPLTPTPASDSPKSAIFNRKMNSNGCKFSSPENTNIAKNRVPAGLFKSPSRNTSSLSTISDLKDFASSQLLDLKRHIDHSH
        MGKKRGGTRRSSAAELLETPPLTP PA+DSPKSAIFNRK NS GCKFSSPENTNIAKN+VPAGLFKS  RN SSLS+ISDLKDFASSQLLDLKRHIDHSH
Subjt:  MGKKRGGTRRSSAAELLETPPLTPTPASDSPKSAIFNRKMNSNGCKFSSPENTNIAKNRVPAGLFKSPSRNTSSLSTISDLKDFASSQLLDLKRHIDHSH

Query:  SQIVKDLDSSNSRLQKRFKFQNQACQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEQESASRACKTSITELSQSFERSIDALRSRFGISST
        SQIVKDLDSSNSRLQKRFK Q+Q CQKMMDEAEKEYKKM+QRIHESQEAMKASYEEFLAHE+ESASRACKT ITELSQ FERSIDALRSRFGI+ST
Subjt:  SQIVKDLDSSNSRLQKRFKFQNQACQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEQESASRACKTSITELSQSFERSIDALRSRFGISST

A0A1S3CDQ6 uncharacterized protein LOC103499240 isoform X14.1e-8690.86Show/hide
Query:  MGKKRGGTRRSSAAELLETPPLTPTPASDSPKSAIFNRKMNSNGCKFSSPENTNIAKNRVPAGLFKSPSRNTSSLSTISDLKDFASSQLLDLKRHIDHSH
        MGKKRGGTRRSSAAELLETPPLTP PA+DSPKSAIFNRK NS GCKFSSPENTNIAKN+VPAGLFKS  RN SSLS+ISDLKDFASSQLLDLKRHIDHSH
Subjt:  MGKKRGGTRRSSAAELLETPPLTPTPASDSPKSAIFNRKMNSNGCKFSSPENTNIAKNRVPAGLFKSPSRNTSSLSTISDLKDFASSQLLDLKRHIDHSH

Query:  SQIVKDLDSSNSRLQKRFKFQNQACQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEQESASR-ACKTSITELSQSFERSIDALRSRFGISST
        SQIVKDLDSSNSRLQKRFK Q+Q CQKMMDEAEKEYKKM+QRIHESQEAMKASYEEFLAHE+ESASR ACKT ITELSQ FERSIDALRSRFGI+ST
Subjt:  SQIVKDLDSSNSRLQKRFKFQNQACQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEQESASR-ACKTSITELSQSFERSIDALRSRFGISST

A0A5D3DBU5 Uncharacterized protein1.7e-8791.33Show/hide
Query:  MGKKRGGTRRSSAAELLETPPLTPTPASDSPKSAIFNRKMNSNGCKFSSPENTNIAKNRVPAGLFKSPSRNTSSLSTISDLKDFASSQLLDLKRHIDHSH
        MGKKRGGTRRSSAAELLETPPLTP PA+DSPKSAIFNRK NS GCKFSSPENTNIAKN+VPAGLFKS  RN SSLS+ISDLKDFASSQLLDLKRHIDHSH
Subjt:  MGKKRGGTRRSSAAELLETPPLTPTPASDSPKSAIFNRKMNSNGCKFSSPENTNIAKNRVPAGLFKSPSRNTSSLSTISDLKDFASSQLLDLKRHIDHSH

Query:  SQIVKDLDSSNSRLQKRFKFQNQACQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEQESASRACKTSITELSQSFERSIDALRSRFGISST
        SQIVKDLDSSNSRLQKRFK Q+Q CQKMMDEAEKEYKKM+QRIHESQEAMKASYEEFLAHE+ESASRACKT ITELSQ FERSIDALRSRFGI+ST
Subjt:  SQIVKDLDSSNSRLQKRFKFQNQACQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEQESASRACKTSITELSQSFERSIDALRSRFGISST

A0A6J1HH77 uncharacterized protein LOC111464038 isoform X21.0e-8489.29Show/hide
Query:  MGKKRGGTRRSSAAELLETPPLTPTPASDSPKSAIFNRKMNSNGCKFSSPENTNIAKNRVPAGLFKSPSRNTSSLSTISDLKDFASSQLLDLKRHIDHSH
        MGKKR  TRRSSAAELLETPP TP PA+DSPKSAIFNRK+NSNG KFSSPENTNI KNRVPAGLFKSPSRN SSLSTISDLKDFA+SQLLDLKRHIDHSH
Subjt:  MGKKRGGTRRSSAAELLETPPLTPTPASDSPKSAIFNRKMNSNGCKFSSPENTNIAKNRVPAGLFKSPSRNTSSLSTISDLKDFASSQLLDLKRHIDHSH

Query:  SQIVKDLDSSNSRLQKRFKFQNQACQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEQESASRACKTSITELSQSFERSIDALRSRFGISST
        SQI+KD +SS SRL+KRFK Q+QACQKMMDEAEKEYKKMSQRI+ESQEAMKASYEEFLAHE ESASRACKTS+TELSQSFERSIDALRSRFGI ST
Subjt:  SQIVKDLDSSNSRLQKRFKFQNQACQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEQESASRACKTSITELSQSFERSIDALRSRFGISST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGAAAAGGGGTGGAACTCGCCGGTCTTCAGCAGCGGAGCTTCTGGAAACGCCGCCGTTAACGCCTACTCCGGCCAGCGATTCTCCGAAGTCAGCGATCTTCAA
CAGAAAAATGAACAGCAATGGATGCAAATTTTCTTCACCAGAGAACACCAACATTGCGAAGAACAGAGTTCCCGCTGGTCTCTTCAAGTCACCTTCTCGAAATACTTCGA
GTTTGAGCACTATATCTGATCTCAAGGATTTTGCGTCTTCACAACTCCTTGATCTCAAGCGCCACATTGATCATTCTCACTCACAAATCGTCAAAGACCTCGATTCCTCA
AACTCACGCCTCCAAAAGCGATTTAAGTTTCAAAATCAAGCATGCCAAAAAATGATGGATGAAGCAGAGAAGGAGTATAAGAAGATGTCTCAAAGAATTCATGAAAGTCA
GGAAGCAATGAAGGCTTCATATGAAGAGTTTTTGGCACATGAACAGGAGAGTGCATCGCGAGCTTGCAAAACATCCATAACTGAACTTTCGCAGTCGTTTGAGAGATCTA
TTGATGCTCTTCGTAGCCGTTTTGGGATCTCGTCCACCTAA
mRNA sequenceShow/hide mRNA sequence
GACTGAAATTGAGCGAAGAAGATGGGGAAGAAAAGGGGTGGAACTCGCCGGTCTTCAGCAGCGGAGCTTCTGGAAACGCCGCCGTTAACGCCTACTCCGGCCAGCGATTC
TCCGAAGTCAGCGATCTTCAACAGAAAAATGAACAGCAATGGATGCAAATTTTCTTCACCAGAGAACACCAACATTGCGAAGAACAGAGTTCCCGCTGGTCTCTTCAAGT
CACCTTCTCGAAATACTTCGAGTTTGAGCACTATATCTGATCTCAAGGATTTTGCGTCTTCACAACTCCTTGATCTCAAGCGCCACATTGATCATTCTCACTCACAAATC
GTCAAAGACCTCGATTCCTCAAACTCACGCCTCCAAAAGCGATTTAAGTTTCAAAATCAAGCATGCCAAAAAATGATGGATGAAGCAGAGAAGGAGTATAAGAAGATGTC
TCAAAGAATTCATGAAAGTCAGGAAGCAATGAAGGCTTCATATGAAGAGTTTTTGGCACATGAACAGGAGAGTGCATCGCGAGCTTGCAAAACATCCATAACTGAACTTT
CGCAGTCGTTTGAGAGATCTATTGATGCTCTTCGTAGCCGTTTTGGGATCTCGTCCACCTAACCTCACTATGAATTAAAATCAGCTTCGTGGTGACTTGAGGAATAACTG
TATATGACATCATGTGGTTCTCAAGAATATCTTTACTCAAGTAAGTTTA
Protein sequenceShow/hide protein sequence
MGKKRGGTRRSSAAELLETPPLTPTPASDSPKSAIFNRKMNSNGCKFSSPENTNIAKNRVPAGLFKSPSRNTSSLSTISDLKDFASSQLLDLKRHIDHSHSQIVKDLDSS
NSRLQKRFKFQNQACQKMMDEAEKEYKKMSQRIHESQEAMKASYEEFLAHEQESASRACKTSITELSQSFERSIDALRSRFGISST