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LsiUNG001610 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsiUNG001610
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr00:3613079..3617745
RNA-Seq ExpressionLsiUNG001610
SyntenyLsiUNG001610
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016796.1 hypothetical protein SDJN02_21907, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-28100Show/hide
Query:  MGYVLRVRLASFFAGAAVASSLGLYLLQRDYKIAYDSISQKMGGLHDSMESRISALEKLNQNDGSQHVQAA
        MGYVLRVRLASFFAGAAVASSLGLYLLQRDYKIAYDSISQKMGGLHDSMESRISALEKLNQNDGSQHVQAA
Subjt:  MGYVLRVRLASFFAGAAVASSLGLYLLQRDYKIAYDSISQKMGGLHDSMESRISALEKLNQNDGSQHVQAA
XP_022138131.1 uncharacterized protein LOC111009377 [Momordica charantia]1.1e-2795.83Show/hide
Query:  MGYVLRVRLASFFAGAAVASSLGLYLLQRDYKIAYDSISQKMGGLHDSMESRISALEKLNQNDGSQHVQAAE
        MGYVLRVRLASFFAGAAVASSLGLYLLQRDYKIAYDSISQKMGGLHDS+ESRISALEKLNQNDGSQHV  AE
Subjt:  MGYVLRVRLASFFAGAAVASSLGLYLLQRDYKIAYDSISQKMGGLHDSMESRISALEKLNQNDGSQHVQAAE
XP_022922390.1 uncharacterized protein LOC111430397 [Cucurbita moschata]1.3e-2898.61Show/hide
Query:  MGYVLRVRLASFFAGAAVASSLGLYLLQRDYKIAYDSISQKMGGLHDSMESRISALEKLNQNDGSQHVQAAE
        MGYVLRVRLASFF GAAVASSLGLYLLQRDYKIAYDSISQKMGGLHDSMESRISALEKLNQNDGSQHVQAAE
Subjt:  MGYVLRVRLASFFAGAAVASSLGLYLLQRDYKIAYDSISQKMGGLHDSMESRISALEKLNQNDGSQHVQAAE
XP_022974358.1 uncharacterized protein LOC111472986 [Cucurbita maxima]4.5e-29100Show/hide
Query:  MGYVLRVRLASFFAGAAVASSLGLYLLQRDYKIAYDSISQKMGGLHDSMESRISALEKLNQNDGSQHVQAAE
        MGYVLRVRLASFFAGAAVASSLGLYLLQRDYKIAYDSISQKMGGLHDSMESRISALEKLNQNDGSQHVQAAE
Subjt:  MGYVLRVRLASFFAGAAVASSLGLYLLQRDYKIAYDSISQKMGGLHDSMESRISALEKLNQNDGSQHVQAAE
XP_023551615.1 uncharacterized protein LOC111809395 [Cucurbita pepo subsp. pepo]4.5e-29100Show/hide
Query:  MGYVLRVRLASFFAGAAVASSLGLYLLQRDYKIAYDSISQKMGGLHDSMESRISALEKLNQNDGSQHVQAAE
        MGYVLRVRLASFFAGAAVASSLGLYLLQRDYKIAYDSISQKMGGLHDSMESRISALEKLNQNDGSQHVQAAE
Subjt:  MGYVLRVRLASFFAGAAVASSLGLYLLQRDYKIAYDSISQKMGGLHDSMESRISALEKLNQNDGSQHVQAAE
TrEMBL top hitse value%identityAlignment
A0A0A0KJB2 Uncharacterized protein3.0e-2691.67Show/hide
Query:  MGYVLRVRLASFFAGAAVASSLGLYLLQRDYKIAYDSISQKMGGLHDSMESRISALEKLNQNDGSQHVQAAE
        MGYVLRVR+ASFFAGAAVASSLGLYLLQRDYKIAYDSIS KMGGLHDS+ SRISALEKLN+ND SQHVQAAE
Subjt:  MGYVLRVRLASFFAGAAVASSLGLYLLQRDYKIAYDSISQKMGGLHDSMESRISALEKLNQNDGSQHVQAAE
A0A1S3AUK7 uncharacterized protein LOC1034830089.2e-2895.83Show/hide
Query:  MGYVLRVRLASFFAGAAVASSLGLYLLQRDYKIAYDSISQKMGGLHDSMESRISALEKLNQNDGSQHVQAAE
        MGYVLRVR+ASFFAGAAVASSLGLYLLQRDYKIAYDSIS KMGGLHDSM SRISALEKLNQNDGSQHVQAAE
Subjt:  MGYVLRVRLASFFAGAAVASSLGLYLLQRDYKIAYDSISQKMGGLHDSMESRISALEKLNQNDGSQHVQAAE
A0A6J1C8U6 uncharacterized protein LOC1110093775.4e-2895.83Show/hide
Query:  MGYVLRVRLASFFAGAAVASSLGLYLLQRDYKIAYDSISQKMGGLHDSMESRISALEKLNQNDGSQHVQAAE
        MGYVLRVRLASFFAGAAVASSLGLYLLQRDYKIAYDSISQKMGGLHDS+ESRISALEKLNQNDGSQHV  AE
Subjt:  MGYVLRVRLASFFAGAAVASSLGLYLLQRDYKIAYDSISQKMGGLHDSMESRISALEKLNQNDGSQHVQAAE
A0A6J1E8L7 uncharacterized protein LOC1114303976.4e-2998.61Show/hide
Query:  MGYVLRVRLASFFAGAAVASSLGLYLLQRDYKIAYDSISQKMGGLHDSMESRISALEKLNQNDGSQHVQAAE
        MGYVLRVRLASFF GAAVASSLGLYLLQRDYKIAYDSISQKMGGLHDSMESRISALEKLNQNDGSQHVQAAE
Subjt:  MGYVLRVRLASFFAGAAVASSLGLYLLQRDYKIAYDSISQKMGGLHDSMESRISALEKLNQNDGSQHVQAAE
A0A6J1IFZ7 uncharacterized protein LOC1114729862.2e-29100Show/hide
Query:  MGYVLRVRLASFFAGAAVASSLGLYLLQRDYKIAYDSISQKMGGLHDSMESRISALEKLNQNDGSQHVQAAE
        MGYVLRVRLASFFAGAAVASSLGLYLLQRDYKIAYDSISQKMGGLHDSMESRISALEKLNQNDGSQHVQAAE
Subjt:  MGYVLRVRLASFFAGAAVASSLGLYLLQRDYKIAYDSISQKMGGLHDSMESRISALEKLNQNDGSQHVQAAE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G53650.1 unknown protein4.7e-1656.94Show/hide
Query:  MGYVLRVRLASFFAGAAVASSLGLYLLQRDYKIAYDSISQKMGGLHDSMESRISALEKLNQNDGSQHVQAAE
        MGYV RVRLASFFAGAA AS +GL +L +DYK+A++SISQ+    HDS++ RIS LE L Q++  Q  +  E
Subjt:  MGYVLRVRLASFFAGAAVASSLGLYLLQRDYKIAYDSISQKMGGLHDSMESRISALEKLNQNDGSQHVQAAE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTATGTCCTGAGAGTGAGATTGGCTTCCTTCTTCGCCGGAGCAGCGGTTGCATCGTCTCTGGGGCTTTACCTTCTTCAGAGAGATTACAAGATTGCTTACGACTC
CATTTCGCAAAAGATGGGAGGGCTGCATGATTCTATGGAAAGTAGAATTTCGGCACTGGAAAAGCTGAACCAGAATGATGGTTCCCAACATGTTCAAGCAGCAGAGTAG
mRNA sequenceShow/hide mRNA sequence
TGAAAATTTTCCAAAAATCTATTAGGCAAAATATGATTTATGAATAGGCATATTTCAATTTGTGGGTGTTAGAAAGAAAAGAGAGAAGGTAGGGGGGAGAGAGAAGCGAA
GCAGAAGGGCGTGGTTGGAAGAAATGGGTTATGTCCTGAGAGTGAGATTGGCTTCCTTCTTCGCCGGAGCAGCGGTTGCATCGTCTCTGGGGCTTTACCTTCTTCAGAGA
GATTACAAGATTGCTTACGACTCCATTTCGCAAAAGATGGGAGGGCTGCATGATTCTATGGAAAGTAGAATTTCGGCACTGGAAAAGCTGAACCAGAATGATGGTTCCCA
ACATGTTCAAGCAGCAGAGTAGACACTGGAGACCAAGCCAGGACAGTCTGAAGGGCCTTGCTGGAAATAGAAAGAACTTCTGAAGAATAATAACTGTAGAAAAACTGGTC
TGCTTTGTATGCACATCAAGATGTTAAATTTTACTTGGAAAATTTGTTTATTTAGTCTATGATGTTATTATCGGATGTAGGTTTGTACTGAGCTGGTAGCTAGTTATAAT
GATGTTACCGTGCTCATAGAAAATTCCCTAAAGTTGATGAGGCTGAATCCTGAATGAGACCCATCCCTCCGCTTGGGGAACACAGCCTTCATCCTTTTCTCTTTTCATTT
TGCCAATGCTGGAGTGTCACGTAAGACTTGTTAATGAGTTTGATGAGTAATCCGAATGAAATTTGTGGGAACTTGAATAATTTTTGAAGTTCAAATAGAGTTTTGGTACA
TTATGGTA
Protein sequenceShow/hide protein sequence
MGYVLRVRLASFFAGAAVASSLGLYLLQRDYKIAYDSISQKMGGLHDSMESRISALEKLNQNDGSQHVQAAE