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MC00g0004 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC00g0004
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
Genome locationscaffold31:51385..51543
RNA-Seq ExpressionMC00g0004
SyntenyMC00g0004
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041397.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]9.10e-0537.74Show/hide
Query:  RSIFSKNGIGVVLWSVWRERNNRSFLDKCRSSTQYWEDIIVFASTWSSKFHLF
        + + + N I ++LW +W ERNNR F  + +     WEDI+     WS K  LF
Subjt:  RSIFSKNGIGVVLWSVWRERNNRSFLDKCRSSTQYWEDIIVFASTWSSKFHLF
KAA0044556.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]9.10e-0537.74Show/hide
Query:  RSIFSKNGIGVVLWSVWRERNNRSFLDKCRSSTQYWEDIIVFASTWSSKFHLF
        + + + N I ++LW +W ERNNR F  + +     WEDI+     WS K  LF
Subjt:  RSIFSKNGIGVVLWSVWRERNNRSFLDKCRSSTQYWEDIIVFASTWSSKFHLF
KAA0056004.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.23e-0437.74Show/hide
Query:  RSIFSKNGIGVVLWSVWRERNNRSFLDKCRSSTQYWEDIIVFASTWSSKFHLF
        + + + N   ++LW +W ERNNR F  + + S   WEDI+     WS K  LF
Subjt:  RSIFSKNGIGVVLWSVWRERNNRSFLDKCRSSTQYWEDIIVFASTWSSKFHLF
RVW64358.1 hypothetical protein CK203_047027 [Vitis vinifera]4.67e-0447.37Show/hide
Query:  VVLWSVWRERNNRSFLDKCRSSTQYWEDIIVFASTWSS
         +LW VW+ERNNR F DK R+    W+ ++ F+S W+S
Subjt:  VVLWSVWRERNNRSFLDKCRSSTQYWEDIIVFASTWSS
RVW97662.1 hypothetical protein CK203_027983 [Vitis vinifera]5.15e-0550Show/hide
Query:  VVLWSVWRERNNRSFLDKCRSSTQYWEDIIVFASTWSS
         +LW VW+ERNNR F DK R+    W+ I++F+S W+S
Subjt:  VVLWSVWRERNNRSFLDKCRSSTQYWEDIIVFASTWSS
TrEMBL top hitse value%identityAlignment
A0A438FWP6 zf-RVT domain-containing protein2.26e-0447.37Show/hide
Query:  VVLWSVWRERNNRSFLDKCRSSTQYWEDIIVFASTWSS
         +LW VW+ERNNR F DK R+    W+ ++ F+S W+S
Subjt:  VVLWSVWRERNNRSFLDKCRSSTQYWEDIIVFASTWSS
A0A438ILR3 Uncharacterized protein2.50e-0550Show/hide
Query:  VVLWSVWRERNNRSFLDKCRSSTQYWEDIIVFASTWSS
         +LW VW+ERNNR F DK R+    W+ I++F+S W+S
Subjt:  VVLWSVWRERNNRSFLDKCRSSTQYWEDIIVFASTWSS
A0A5A7TIB8 LINE-1 retrotransposable element ORF2 protein4.41e-0537.74Show/hide
Query:  RSIFSKNGIGVVLWSVWRERNNRSFLDKCRSSTQYWEDIIVFASTWSSKFHLF
        + + + N I ++LW +W ERNNR F  + +     WEDI+     WS K  LF
Subjt:  RSIFSKNGIGVVLWSVWRERNNRSFLDKCRSSTQYWEDIIVFASTWSSKFHLF
A0A5A7TR15 LINE-1 retrotransposable element ORF2 protein4.40e-0537.74Show/hide
Query:  RSIFSKNGIGVVLWSVWRERNNRSFLDKCRSSTQYWEDIIVFASTWSSKFHLF
        + + + N I ++LW +W ERNNR F  + +     WEDI+     WS K  LF
Subjt:  RSIFSKNGIGVVLWSVWRERNNRSFLDKCRSSTQYWEDIIVFASTWSSKFHLF
A0A5A7ULE1 LINE-1 retrotransposable element ORF2 protein5.96e-0537.74Show/hide
Query:  RSIFSKNGIGVVLWSVWRERNNRSFLDKCRSSTQYWEDIIVFASTWSSKFHLF
        + + + N   ++LW +W ERNNR F  + + S   WEDI+     WS K  LF
Subjt:  RSIFSKNGIGVVLWSVWRERNNRSFLDKCRSSTQYWEDIIVFASTWSSKFHLF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGATCCATTTTTTCGAAAAATGGTATCGGTGTTGTTCTTTGGAGTGTTTGGCGGGAAAGAAACAACCGATCTTTTTTGGACAAATGTCGCTCTTCTACTCAATATTGGGA
GGATATTATAGTCTTTGCATCAACTTGGTCCTCAAAATTTCATCTTTTT
mRNA sequenceShow/hide mRNA sequence
AGATCCATTTTTTCGAAAAATGGTATCGGTGTTGTTCTTTGGAGTGTTTGGCGGGAAAGAAACAACCGATCTTTTTTGGACAAATGTCGCTCTTCTACTCAATATTGGGA
GGATATTATAGTCTTTGCATCAACTTGGTCCTCAAAATTTCATCTTTTT
Protein sequenceShow/hide protein sequence
RSIFSKNGIGVVLWSVWRERNNRSFLDKCRSSTQYWEDIIVFASTWSSKFHLF