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MC00g0012 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC00g0012
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionextensin-like
Genome locationscaffold31:168773..169231
RNA-Seq ExpressionMC00g0012
SyntenyMC00g0012
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011659717.1 vegetative cell wall protein gp1 [Cucumis sativus]1.05e-2356.96Show/hide
Query:  MPHSALLNALMAAALLASAAA-APRPAPSPSPMATPSPPWRWTPNPKPPTPPTSSSPAPSPQPTPPSSPAPSPSPTTAVVPPA----PPTAAPVSPPPQT
        MPHS LLNAL+AAALL SAAA +P P+PSP+P A+ SPPWRW P  KPPT P    P PS + T PS+P PSP   T+V PPA    PPTA P SP    
Subjt:  MPHSALLNALMAAALLASAAA-APRPAPSPSPMATPSPPWRWTPNPKPPTPPTSSSPAPSPQPTPPSSPAPSPSPTTAVVPPA----PPTAAPVSPPPQT

Query:  QSPAPPVTPPPAQAPAPSWIAGPPADALAPSKHKSNALKNRFSLVGSVGIGAMAAAAL
                     +P+P+WIA PP++AL+PSK KS+  KN FS+VGSV IGAMAAAAL
Subjt:  QSPAPPVTPPPAQAPAPSWIAGPPADALAPSKHKSNALKNRFSLVGSVGIGAMAAAAL
XP_022141995.1 extensin-like [Momordica charantia]5.01e-75100Show/hide
Query:  MAAALLASAAAAPRPAPSPSPMATPSPPWRWTPNPKPPTPPTSSSPAPSPQPTPPSSPAPSPSPTTAVVPPAPPTAAPVSPPPQTQSPAPPVTPPPAQAP
        MAAALLASAAAAPRPAPSPSPMATPSPPWRWTPNPKPPTPPTSSSPAPSPQPTPPSSPAPSPSPTTAVVPPAPPTAAPVSPPPQTQSPAPPVTPPPAQAP
Subjt:  MAAALLASAAAAPRPAPSPSPMATPSPPWRWTPNPKPPTPPTSSSPAPSPQPTPPSSPAPSPSPTTAVVPPAPPTAAPVSPPPQTQSPAPPVTPPPAQAP

Query:  APSWIAGPPADALAPSKHKSNALKNRFSLVGSVGIGAMAAAAL
        APSWIAGPPADALAPSKHKSNALKNRFSLVGSVGIGAMAAAAL
Subjt:  APSWIAGPPADALAPSKHKSNALKNRFSLVGSVGIGAMAAAAL
XP_038887113.1 anther-specific proline-rich protein APG-like [Benincasa hispida]2.61e-2560.25Show/hide
Query:  MPHSALLNALMAAALLASAAAAPRPAPSPSPM----ATPSPPWRWTPNPKPPTPPTSSSPAPSPQPTPP-SSPAPSPSPTTAVVPPA---PPTAAPVSPP
        MPHSALLNAL+AAALL SAAAAP PAPSP+P+    A+PSPPWRWTP  KPP    SS+P+   +PTPP SSP P+PSPT  V+PP     PT  PVS P
Subjt:  MPHSALLNALMAAALLASAAAAPRPAPSPSPM----ATPSPPWRWTPNPKPPTPPTSSSPAPSPQPTPP-SSPAPSPSPTTAVVPPA---PPTAAPVSPP

Query:  PQTQSPAPPVTPPPAQAPAPSWIAGPPADALAPSKHKSNALKNRFSLVGSVGIGAMAAAAL
         Q        +P P+ +P+PSWIA PP +A APSK KS+A  NRFS+V SV I AMAAA L
Subjt:  PQTQSPAPPVTPPPAQAPAPSWIAGPPADALAPSKHKSNALKNRFSLVGSVGIGAMAAAAL
TrEMBL top hitse value%identityAlignment
A0A0A0K238 Uncharacterized protein5.10e-2456.96Show/hide
Query:  MPHSALLNALMAAALLASAAA-APRPAPSPSPMATPSPPWRWTPNPKPPTPPTSSSPAPSPQPTPPSSPAPSPSPTTAVVPPA----PPTAAPVSPPPQT
        MPHS LLNAL+AAALL SAAA +P P+PSP+P A+ SPPWRW P  KPPT P    P PS + T PS+P PSP   T+V PPA    PPTA P SP    
Subjt:  MPHSALLNALMAAALLASAAA-APRPAPSPSPMATPSPPWRWTPNPKPPTPPTSSSPAPSPQPTPPSSPAPSPSPTTAVVPPA----PPTAAPVSPPPQT

Query:  QSPAPPVTPPPAQAPAPSWIAGPPADALAPSKHKSNALKNRFSLVGSVGIGAMAAAAL
                     +P+P+WIA PP++AL+PSK KS+  KN FS+VGSV IGAMAAAAL
Subjt:  QSPAPPVTPPPAQAPAPSWIAGPPADALAPSKHKSNALKNRFSLVGSVGIGAMAAAAL
A0A6J1CJN4 extensin-like2.42e-75100Show/hide
Query:  MAAALLASAAAAPRPAPSPSPMATPSPPWRWTPNPKPPTPPTSSSPAPSPQPTPPSSPAPSPSPTTAVVPPAPPTAAPVSPPPQTQSPAPPVTPPPAQAP
        MAAALLASAAAAPRPAPSPSPMATPSPPWRWTPNPKPPTPPTSSSPAPSPQPTPPSSPAPSPSPTTAVVPPAPPTAAPVSPPPQTQSPAPPVTPPPAQAP
Subjt:  MAAALLASAAAAPRPAPSPSPMATPSPPWRWTPNPKPPTPPTSSSPAPSPQPTPPSSPAPSPSPTTAVVPPAPPTAAPVSPPPQTQSPAPPVTPPPAQAP

Query:  APSWIAGPPADALAPSKHKSNALKNRFSLVGSVGIGAMAAAAL
        APSWIAGPPADALAPSKHKSNALKNRFSLVGSVGIGAMAAAAL
Subjt:  APSWIAGPPADALAPSKHKSNALKNRFSLVGSVGIGAMAAAAL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G68725.1 arabinogalactan protein 198.8e-0449.06Show/hide
Query:  PAPSPSPMATPSPPWRWTPNPKPPTPPTSSSPAPSPQPTPPSSPAPSPSPTTAVVPPAPPTAAPVSPPPQTQSPAP-PVTPPPAQAPAPSWIAGPPADAL
        PAP  +P+ +P+     TP P+PP  P +S+P  SP P  P     SP PT     PA P  AP SPPP   SP P PV+PPP QAP+P  I+ PPA A 
Subjt:  PAPSPSPMATPSPPWRWTPNPKPPTPPTSSSPAPSPQPTPPSSPAPSPSPTTAVVPPAPPTAAPVSPPPQTQSPAP-PVTPPPAQAPAPSWIAGPPADAL

Query:  APSKHK
        AP+KHK
Subjt:  APSKHK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCACTCAGCCCTTCTTAACGCCCTGATGGCGGCGGCGCTGCTCGCCTCTGCCGCCGCCGCTCCCCGGCCGGCACCCTCGCCTTCTCCGATGGCCACCCCTTCACC
GCCCTGGAGATGGACCCCCAATCCAAAGCCTCCCACACCTCCGACGTCGTCGTCTCCGGCACCGTCTCCACAGCCCACTCCGCCGTCGTCTCCGGCACCGTCTCCATCTC
CGACGACAGCCGTGGTCCCGCCGGCACCGCCAACTGCAGCCCCGGTTTCCCCACCACCGCAGACTCAGAGCCCTGCTCCGCCGGTGACTCCGCCGCCCGCTCAGGCTCCG
GCTCCGTCGTGGATCGCCGGTCCGCCGGCAGACGCACTGGCGCCGTCGAAACATAAGAGCAACGCCTTAAAAAACCGATTCTCGCTGGTCGGATCAGTGGGCATTGGAGC
CATGGCTGCTGCTGCTTTA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCACTCAGCCCTTCTTAACGCCCTGATGGCGGCGGCGCTGCTCGCCTCTGCCGCCGCCGCTCCCCGGCCGGCACCCTCGCCTTCTCCGATGGCCACCCCTTCACC
GCCCTGGAGATGGACCCCCAATCCAAAGCCTCCCACACCTCCGACGTCGTCGTCTCCGGCACCGTCTCCACAGCCCACTCCGCCGTCGTCTCCGGCACCGTCTCCATCTC
CGACGACAGCCGTGGTCCCGCCGGCACCGCCAACTGCAGCCCCGGTTTCCCCACCACCGCAGACTCAGAGCCCTGCTCCGCCGGTGACTCCGCCGCCCGCTCAGGCTCCG
GCTCCGTCGTGGATCGCCGGTCCGCCGGCAGACGCACTGGCGCCGTCGAAACATAAGAGCAACGCCTTAAAAAACCGATTCTCGCTGGTCGGATCAGTGGGCATTGGAGC
CATGGCTGCTGCTGCTTTA
Protein sequenceShow/hide protein sequence
MPHSALLNALMAAALLASAAAAPRPAPSPSPMATPSPPWRWTPNPKPPTPPTSSSPAPSPQPTPPSSPAPSPSPTTAVVPPAPPTAAPVSPPPQTQSPAPPVTPPPAQAP
APSWIAGPPADALAPSKHKSNALKNRFSLVGSVGIGAMAAAAL