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MC00g0023 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC00g0023
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationscaffold31:364525..364724
RNA-Seq ExpressionMC00g0023
SyntenyMC00g0023
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]9.69e-0944.78Show/hide
Query:  PRKENILIW-LVHMELNTADRVKKRCTYRTFNPNCCMLCLKAREDHYHMFFNCSYSRIIW---KAML
        P+K    IW L+H  +NTADR++KR    T +PN C +C K++ED  H+F +C YS+ +W   KA+L
Subjt:  PRKENILIW-LVHMELNTADRVKKRCTYRTFNPNCCMLCLKAREDHYHMFFNCSYSRIIW---KAML
KAA0041397.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.81e-0845Show/hide
Query:  PRKENILIW-LVHMELNTADRVKKRCTYRTFNPNCCMLCLKAREDHYHMFFNCSYSRIIW
        P+K    IW L+H  +NTADR++KR    T +PN C +C K++ED  H+F +C YS+ +W
Subjt:  PRKENILIW-LVHMELNTADRVKKRCTYRTFNPNCCMLCLKAREDHYHMFFNCSYSRIIW
KAA0044451.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]4.55e-0843.28Show/hide
Query:  PRKENILIW-LVHMELNTADRVKKRCTYRTFNPNCCMLCLKAREDHYHMFFNCSYSRIIW---KAML
        P+K    IW L+H  +NTADR++KR      +PN C +C K++ED  H+F +C YS+ +W   KA+L
Subjt:  PRKENILIW-LVHMELNTADRVKKRCTYRTFNPNCCMLCLKAREDHYHMFFNCSYSRIIW---KAML
KAA0044556.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.81e-0845Show/hide
Query:  PRKENILIW-LVHMELNTADRVKKRCTYRTFNPNCCMLCLKAREDHYHMFFNCSYSRIIW
        P+K    IW L+H  +NTADR++KR    T +PN C +C K++ED  H+F +C YS+ +W
Subjt:  PRKENILIW-LVHMELNTADRVKKRCTYRTFNPNCCMLCLKAREDHYHMFFNCSYSRIIW
TYK29578.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]4.54e-0843.28Show/hide
Query:  PRKENILIW-LVHMELNTADRVKKRCTYRTFNPNCCMLCLKAREDHYHMFFNCSYSRIIW---KAML
        P+K    IW L+H  +NTADR++KR      +PN C +C K++ED  H+F +C YS+ +W   KA+L
Subjt:  PRKENILIW-LVHMELNTADRVKKRCTYRTFNPNCCMLCLKAREDHYHMFFNCSYSRIIW---KAML
TrEMBL top hitse value%identityAlignment
A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein4.69e-0944.78Show/hide
Query:  PRKENILIW-LVHMELNTADRVKKRCTYRTFNPNCCMLCLKAREDHYHMFFNCSYSRIIW---KAML
        P+K    IW L+H  +NTADR++KR    T +PN C +C K++ED  H+F +C YS+ +W   KA+L
Subjt:  PRKENILIW-LVHMELNTADRVKKRCTYRTFNPNCCMLCLKAREDHYHMFFNCSYSRIIW---KAML
A0A5A7TIB8 LINE-1 retrotransposable element ORF2 protein8.76e-0945Show/hide
Query:  PRKENILIW-LVHMELNTADRVKKRCTYRTFNPNCCMLCLKAREDHYHMFFNCSYSRIIW
        P+K    IW L+H  +NTADR++KR    T +PN C +C K++ED  H+F +C YS+ +W
Subjt:  PRKENILIW-LVHMELNTADRVKKRCTYRTFNPNCCMLCLKAREDHYHMFFNCSYSRIIW
A0A5A7TR15 LINE-1 retrotransposable element ORF2 protein8.74e-0945Show/hide
Query:  PRKENILIW-LVHMELNTADRVKKRCTYRTFNPNCCMLCLKAREDHYHMFFNCSYSRIIW
        P+K    IW L+H  +NTADR++KR    T +PN C +C K++ED  H+F +C YS+ +W
Subjt:  PRKENILIW-LVHMELNTADRVKKRCTYRTFNPNCCMLCLKAREDHYHMFFNCSYSRIIW
A0A5A7TSA7 LINE-1 retrotransposable element ORF2 protein2.20e-0843.28Show/hide
Query:  PRKENILIW-LVHMELNTADRVKKRCTYRTFNPNCCMLCLKAREDHYHMFFNCSYSRIIW---KAML
        P+K    IW L+H  +NTADR++KR      +PN C +C K++ED  H+F +C YS+ +W   KA+L
Subjt:  PRKENILIW-LVHMELNTADRVKKRCTYRTFNPNCCMLCLKAREDHYHMFFNCSYSRIIW---KAML
A0A5D3E1E3 LINE-1 retrotransposable element ORF2 protein2.20e-0843.28Show/hide
Query:  PRKENILIW-LVHMELNTADRVKKRCTYRTFNPNCCMLCLKAREDHYHMFFNCSYSRIIW---KAML
        P+K    IW L+H  +NTADR++KR      +PN C +C K++ED  H+F +C YS+ +W   KA+L
Subjt:  PRKENILIW-LVHMELNTADRVKKRCTYRTFNPNCCMLCLKAREDHYHMFFNCSYSRIIW---KAML
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCCAGAAAAGAAAATATTTTGATTTGGCTAGTCCACATGGAACTAAACACAGCCGACAGAGTAAAAAAAAGATGTACATATCGGACATTTAACCCTAACTGTTGTATGTT
ATGCTTAAAAGCCAGGGAGGATCATTATCATATGTTCTTCAATTGTTCCTACAGCAGAATAATATGGAAAGCTATGCTTCCGAGCTTT
mRNA sequenceShow/hide mRNA sequence
CCCAGAAAAGAAAATATTTTGATTTGGCTAGTCCACATGGAACTAAACACAGCCGACAGAGTAAAAAAAAGATGTACATATCGGACATTTAACCCTAACTGTTGTATGTT
ATGCTTAAAAGCCAGGGAGGATCATTATCATATGTTCTTCAATTGTTCCTACAGCAGAATAATATGGAAAGCTATGCTTCCGAGCTTT
Protein sequenceShow/hide protein sequence
PRKENILIWLVHMELNTADRVKKRCTYRTFNPNCCMLCLKAREDHYHMFFNCSYSRIIWKAMLPSF