; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC00g0036 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC00g0036
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationscaffold31:625718..626837
RNA-Seq ExpressionMC00g0036
SyntenyMC00g0036
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016421.1 Chlorophyll a-b binding protein CP24 10A, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]3.61e-17493.7Show/hide
Query:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
        ATS A+LNG GSPFLRGGS R+  LLAGARGGVNVVGSRKLVIVAAAQPKKSW+P V+GGGNLVDPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELI
Subjt:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI

Query:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
        HGRWAMAAVVGIFVGQAWSGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
Subjt:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FAG++KDGVYIPDT+KLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALG+
Subjt:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

XP_008441527.1 PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic [Cucumis melo]4.40e-17594.49Show/hide
Query:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
        ATS A+LNG GSPFLRG SSR+  LLAGARGGVNVV S KLV++AAAQPKKSW+PGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
Subjt:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI

Query:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
        HGRWAMAAVVGIFVGQAWSGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
Subjt:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FAG+LKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

XP_022141907.1 chlorophyll a-b binding protein CP24 10A, chloroplastic [Momordica charantia]7.34e-186100Show/hide
Query:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
        ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
Subjt:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI

Query:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
        HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
Subjt:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

XP_022988907.1 chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita maxima]5.13e-17493.7Show/hide
Query:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
        ATS ALLNG GSPFL GGS R+  LLAGARGGVNVV SRKLVIVAAAQPKKSW+P V+GGGN +DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
Subjt:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI

Query:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
        HGRWAMAAVVGIF+GQAWSGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
Subjt:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FAG+LKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

XP_022993917.1 chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita maxima]1.26e-17494.09Show/hide
Query:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
        ATS A+LNG GSPFLRGGS R+  LLAGARGGVNVVGSRKLVIVAAAQPKKSW+P V+GGGNLVDPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELI
Subjt:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI

Query:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
        HGRWAMAAVVGIFVGQAWSGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
Subjt:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FAG++KDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALG+
Subjt:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

TrEMBL top hitse value%identityAlignment
A0A1S3B4E4 Chlorophyll a-b binding protein, chloroplastic2.13e-17594.49Show/hide
Query:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
        ATS A+LNG GSPFLRG SSR+  LLAGARGGVNVV S KLV++AAAQPKKSW+PGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
Subjt:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI

Query:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
        HGRWAMAAVVGIFVGQAWSGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
Subjt:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FAG+LKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

A0A5D3DGI0 Chlorophyll a-b binding protein, chloroplastic2.13e-17594.49Show/hide
Query:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
        ATS A+LNG GSPFLRG SSR+  LLAGARGGVNVV S KLV++AAAQPKKSW+PGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
Subjt:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI

Query:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
        HGRWAMAAVVGIFVGQAWSGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
Subjt:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FAG+LKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

A0A6J1CL59 Chlorophyll a-b binding protein, chloroplastic3.55e-186100Show/hide
Query:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
        ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
Subjt:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI

Query:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
        HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
Subjt:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

A0A6J1JEC2 Chlorophyll a-b binding protein, chloroplastic2.48e-17493.7Show/hide
Query:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
        ATS ALLNG GSPFL GGS R+  LLAGARGGVNVV SRKLVIVAAAQPKKSW+P V+GGGN +DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
Subjt:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI

Query:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
        HGRWAMAAVVGIF+GQAWSGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
Subjt:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FAG+LKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

A0A6J1JU87 Chlorophyll a-b binding protein, chloroplastic6.10e-17594.09Show/hide
Query:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
        ATS A+LNG GSPFLRGGS R+  LLAGARGGVNVVGSRKLVIVAAAQPKKSW+P V+GGGNLVDPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELI
Subjt:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI

Query:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
        HGRWAMAAVVGIFVGQAWSGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
Subjt:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FAG++KDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALG+
Subjt:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

SwissProt top hitse value%identityAlignment
P13869 Chlorophyll a-b binding protein, chloroplastic4.2e-3236.19Show/hide
Query:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGG--------VNVVGSRKLVI--VAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAF
        A+S      F SP  +   S   A  A   GG        +  VGSR + +  VAA   +  W PG         PEWLDGSLPGD+GFDPLGLG DP  
Subjt:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGG--------VNVVGSRKLVI--VAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAF

Query:  LKWYREAELIHGRWAMAAVVGIFVGQAWSGI------PWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANA
        LKW  +AEL+H RWAM    GIF+ +  + I       W+ AG            +L   +L+L+GW E +RW D   P   + +   P      N    
Subjt:  LKWYREAELIHGRWAMAAVVGIFVGQAWSGI------PWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANA

Query:  TGEQGYPGGKFFDPLGFAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFE
        T + GYPGG +FDPLG+              K++ L+  EIK+ R+AMLA++  +F+
Subjt:  TGEQGYPGGKFFDPLGFAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFE

P27524 Chlorophyll a-b binding protein CP24 10A, chloroplastic2.0e-11981.42Show/hide
Query:  TSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIH
        TSAA+LNG  S FL GG+     L A     V    + K   V AA  KKSW+P VRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIH
Subjt:  TSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIH

Query:  GRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGF
        GRWAMAAV+GIFVGQAWSGIPWFEAGADP AIAPFSFG+LLGTQL+LMGWVESKRWVDFF+P+SQSVEWATPWS+TAENFAN TGEQGYPGGKFFDPL  
Subjt:  GRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGF

Query:  AGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        AG+L +GVY+PDTEKLERLK+AEIKHAR+AMLAMLIFYFEAGQGKTPLGALGL
Subjt:  AGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

P27525 Chlorophyll a-b binding protein CP24 10B, chloroplastic1.6e-11679.92Show/hide
Query:  TSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAA-QPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
        ++ A+LNG  S FL GG  ++ ALL GA     V   ++ V+ AAA  PKKSW+P V+ GGNLVDPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELI
Subjt:  TSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAA-QPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI

Query:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
        HGRWAMAAV+GIFVGQAWSGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFF+ +SQS++WATPWS+TAENFAN TGEQGYPGGKFFDPL 
Subjt:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
         AG+L +GVY+PDTEKLERLKLAEIKH+R+AMLAMLIFYFEAGQGKTPLGALGL
Subjt:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

P36494 Chlorophyll a-b binding protein CP24, chloroplastic2.7e-11979.07Show/hide
Query:  ATSA-ALLNGFGSPFLRGGSSRSHALL---AGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYRE
        ATSA A++NGF SPFL GG   S +LL   +    GV+    + +V+ AAA PKKSW+P V+GGGN +DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYRE
Subjt:  ATSA-ALLNGFGSPFLRGGSSRSHALL---AGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYRE

Query:  AELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFF
        AELIHGRWAM AV+GIFVGQAW+GIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFF+P+SQSVEWATPWSRTAENF+N+TGEQGYPGGKFF
Subjt:  AELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFF

Query:  DPLGFAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        DPL  AG++ +GVY PDT+KLERLKLAEIKHAR+AMLAMLIFYFEAGQGKTPLGALGL
Subjt:  DPLGFAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

Q8LCQ4 Photosystem I chlorophyll a/b-binding protein 6, chloroplastic2.1e-3136.82Show/hide
Query:  RSHALLAGARGGVNVVGSRKLVIVAAAQPKKS-----------WLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV
        R H     + GG   +   +LV+V A +   S           W PG         PEWLDGSLPGD+GFDPLGLG DP  LKW+ +AELIH RWAM AV
Subjt:  RSHALLAGARGGVNVVGSRKLVIVAAAQPKKS-----------WLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV

Query:  VGIFVGQAW------SGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAG
         GI + +            W++AG+           +L   Q++LMGW E +RW D   P S  +E   P      +  N   + GYPGG +FD + +  
Subjt:  VGIFVGQAW------SGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAG

Query:  SLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEA
           + V +        L+  EIK+ R+AMLA L F F+A
Subjt:  SLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEA

Arabidopsis top hitse value%identityAlignment
AT1G15820.1 light harvesting complex photosystem II subunit 69.4e-12079.61Show/hide
Query:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVI-VAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
        A S A+L+G GS FL GG   + AL +G   G   VG + L++  AAAQPKKSW+P V+GGGN +DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAEL
Subjt:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVI-VAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAV+GIFVGQAWSG+ WFEAGA P AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNP+SQSVEWATPWS+TAENFAN TG+QGYPGG+FFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        G AG  +DGVY PD EKLERLKLAEIKH+R+AM+AMLIFYFEAGQGKTPLGALGL
Subjt:  GFAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

AT1G19150.1 photosystem I light harvesting complex gene 61.5e-3236.82Show/hide
Query:  RSHALLAGARGGVNVVGSRKLVIVAAAQPKKS-----------WLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV
        R H     + GG   +   +LV+V A +   S           W PG         PEWLDGSLPGD+GFDPLGLG DP  LKW+ +AELIH RWAM AV
Subjt:  RSHALLAGARGGVNVVGSRKLVIVAAAQPKKS-----------WLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV

Query:  VGIFVGQAW------SGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAG
         GI + +            W++AG+           +L   Q++LMGW E +RW D   P S  +E   P      +  N   + GYPGG +FD + +  
Subjt:  VGIFVGQAW------SGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAG

Query:  SLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEA
           + V +        L+  EIK+ R+AMLA L F F+A
Subjt:  SLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEA

AT1G45474.1 photosystem I light harvesting complex gene 51.9e-3240.52Show/hide
Query:  SRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--A
        +R  + +  A GG+N            A  + +WLPG      L  P +LDG+L GDYGFDPLGLG+DP  LKWY +AEL+H R+AM  V GI       
Subjt:  SRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--A

Query:  WSGI----PWFEAGADPRAIAPFSFGS---LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSLKDGVY
         +GI     W+EAGA       F F S   L+  Q LLMG+ E+KR++DF +P SQ+ E +  +   A   A    E GYPGG   +PLG A        
Subjt:  WSGI----PWFEAGADPRAIAPFSFGS---LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSLKDGVY

Query:  IPDTEKLERLKLAEIKHARIAMLAMLIFYFEA
          D +     KL EIK+ R+AM+AML F+ +A
Subjt:  IPDTEKLERLKLAEIKHARIAMLAMLIFYFEA

AT1G45474.2 photosystem I light harvesting complex gene 51.9e-3240.52Show/hide
Query:  SRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--A
        +R  + +  A GG+N            A  + +WLPG      L  P +LDG+L GDYGFDPLGLG+DP  LKWY +AEL+H R+AM  V GI       
Subjt:  SRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--A

Query:  WSGI----PWFEAGADPRAIAPFSFGS---LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSLKDGVY
         +GI     W+EAGA       F F S   L+  Q LLMG+ E+KR++DF +P SQ+ E +  +   A   A    E GYPGG   +PLG A        
Subjt:  WSGI----PWFEAGADPRAIAPFSFGS---LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSLKDGVY

Query:  IPDTEKLERLKLAEIKHARIAMLAMLIFYFEA
          D +     KL EIK+ R+AM+AML F+ +A
Subjt:  IPDTEKLERLKLAEIKHARIAMLAMLIFYFEA

AT3G61470.1 photosystem I light harvesting complex gene 27.4e-3236.24Show/hide
Query:  GGVNVVGSRKLVIVAAAQPKKS------------WLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAW
        GG  +   +KL + A ++P  S            W PG         PEWLDGSLPGD+GFDPLGL  DP  LKW  +AE++H RWAM    GIF+ +  
Subjt:  GGVNVVGSRKLVIVAAAQPKKS------------WLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAW

Query:  SGI------PWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSLKDGVYIP
        + I       W+ AG            +L   +L+L+GW E +RW D   P S + +   P      N    T + GYPGG +FDPLG+           
Subjt:  SGI------PWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSLKDGVYIP

Query:  DTEKLERLKLAEIKHARIAMLAMLIFYFE
           KL+ L+  EIK+ R+AMLA++  +F+
Subjt:  DTEKLERLKLAEIKHARIAMLAMLIFYFE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCAACTTCTGCTGCTCTGCTTAATGGCTTTGGCTCCCCCTTCCTCCGTGGGGGCAGTAGCAGAAGCCACGCCCTGCTCGCTGGAGCCAGAGGTGGTGTCAATGTCGTCGG
CTCTCGCAAGCTCGTCATCGTCGCCGCTGCTCAGCCCAAGAAGTCTTGGCTCCCCGGCGTTAGGGGCGGCGGCAACTTGGTCGACCCCGAATGGCTCGATGGCTCGCTCC
CAGGCGACTACGGGTTCGACCCACTGGGCTTGGGGAAGGACCCAGCATTCCTGAAGTGGTACAGAGAGGCAGAGCTAATCCACGGCCGGTGGGCAATGGCGGCTGTGGTC
GGAATCTTCGTGGGGCAGGCTTGGAGTGGGATCCCATGGTTCGAAGCCGGAGCGGATCCGAGGGCAATTGCTCCCTTCTCCTTCGGATCTCTGCTGGGAACACAGCTGCT
GCTGATGGGATGGGTGGAAAGCAAGCGGTGGGTGGATTTCTTCAACCCTGAGTCACAATCGGTGGAGTGGGCGACGCCTTGGTCGAGGACGGCGGAGAATTTCGCGAACG
CGACGGGAGAACAGGGGTACCCCGGCGGGAAATTCTTCGATCCGTTGGGATTCGCCGGAAGTTTGAAGGACGGAGTTTACATTCCGGACACGGAGAAGCTGGAGAGATTG
AAGTTGGCGGAGATCAAGCACGCTCGGATCGCCATGTTGGCGATGCTCATCTTCTACTTCGAAGCTGGACAGGGGAAGACGCCGCTGGGTGCTCTTGGATTG
mRNA sequenceShow/hide mRNA sequence
GCAACTTCTGCTGCTCTGCTTAATGGCTTTGGCTCCCCCTTCCTCCGTGGGGGCAGTAGCAGAAGCCACGCCCTGCTCGCTGGAGCCAGAGGTGGTGTCAATGTCGTCGG
CTCTCGCAAGCTCGTCATCGTCGCCGCTGCTCAGCCCAAGAAGTCTTGGCTCCCCGGCGTTAGGGGCGGCGGCAACTTGGTCGACCCCGAATGGCTCGATGGCTCGCTCC
CAGGCGACTACGGGTTCGACCCACTGGGCTTGGGGAAGGACCCAGCATTCCTGAAGTGGTACAGAGAGGCAGAGCTAATCCACGGCCGGTGGGCAATGGCGGCTGTGGTC
GGAATCTTCGTGGGGCAGGCTTGGAGTGGGATCCCATGGTTCGAAGCCGGAGCGGATCCGAGGGCAATTGCTCCCTTCTCCTTCGGATCTCTGCTGGGAACACAGCTGCT
GCTGATGGGATGGGTGGAAAGCAAGCGGTGGGTGGATTTCTTCAACCCTGAGTCACAATCGGTGGAGTGGGCGACGCCTTGGTCGAGGACGGCGGAGAATTTCGCGAACG
CGACGGGAGAACAGGGGTACCCCGGCGGGAAATTCTTCGATCCGTTGGGATTCGCCGGAAGTTTGAAGGACGGAGTTTACATTCCGGACACGGAGAAGCTGGAGAGATTG
AAGTTGGCGGAGATCAAGCACGCTCGGATCGCCATGTTGGCGATGCTCATCTTCTACTTCGAAGCTGGACAGGGGAAGACGCCGCTGGGTGCTCTTGGATTG
Protein sequenceShow/hide protein sequence
ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVV
GIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSLKDGVYIPDTEKLERL
KLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL