; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC00g0059 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC00g0059
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionENDO3c domain-containing protein
Genome locationscaffold31:1251984..1252239
RNA-Seq ExpressionMC00g0059
SyntenyMC00g0059
Gene Ontology termsGO:0006285 - base-excision repair, AP site formation (biological process)
GO:0006307 - DNA dealkylation involved in DNA repair (biological process)
GO:0005634 - nucleus (cellular component)
GO:0032993 - protein-DNA complex (cellular component)
GO:0008725 - DNA-3-methyladenine glycosylase activity (molecular function)
GO:0032131 - alkylated DNA binding (molecular function)
GO:0043916 - DNA-7-methylguanine glycosylase activity (molecular function)
InterPro domainsIPR011257 - DNA glycosylase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034142.1 mag1, partial [Cucurbita argyrosperma subsp. argyrosperma]9.38e-2460.49Show/hide
Query:  LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWRLI
        LL  LTAVKGI +W V++F+IF LH+ +VLPVGDLGV KGV+  Y     + +   +EMEKLCEKW+PY SMGAWY WRL+
Subjt:  LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWRLI
XP_004143510.1 DNA-3-methyladenine glycosylase 1 [Cucumis sativus]6.58e-2460.49Show/hide
Query:  LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWRLI
        LL+ LTAVKGI +W V++F+IF LH+ +VLPVGDLGV KGV+  Y     + +    EMEKLCEKW+PY S+GAWY WRLI
Subjt:  LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWRLI
XP_022132520.1 DNA-3-methyladenine glycosylase 1-like [Momordica charantia]1.01e-2359.26Show/hide
Query:  LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWRLI
        L++TLTAVKGI +W V +F+IF+LH+ +VLPVGDLGV KGV+  Y     + +   +EMEKLC+KW+PY SMGAWY WRL+
Subjt:  LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWRLI
XP_022949777.1 DNA-3-methyladenine glycosylase 1-like [Cucurbita moschata]9.38e-2460.49Show/hide
Query:  LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWRLI
        LL  LTAVKGI +W V++F+IF LH+ +VLPVGDLGV KGV+  Y     + +   +EMEKLCEKW+PY SMGAWY WRL+
Subjt:  LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWRLI
XP_038881017.1 DNA-3-methyladenine glycosylase 1-like [Benincasa hispida]4.12e-2460.49Show/hide
Query:  LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWRLI
        LL+ LTAVKGI +W V++F+IF LH+ +VLPVGDLGV KGV+  Y     + +    EMEKLCEKW+PY SMGAWY WRL+
Subjt:  LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWRLI
TrEMBL top hitse value%identityAlignment
A0A0A0KM62 ENDO3c domain-containing protein3.18e-2460.49Show/hide
Query:  LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWRLI
        LL+ LTAVKGI +W V++F+IF LH+ +VLPVGDLGV KGV+  Y     + +    EMEKLCEKW+PY S+GAWY WRLI
Subjt:  LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWRLI
A0A5A7T3R0 Putative DNA-3-methyladenine glycosylase 24.00e-2357.83Show/hide
Query:  LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWRLIRN
        LL  LTAVKGI +W V++F+IF LH+ +VLPVGDLGV KGV+  Y     + +    EMEKLCEKW+PY S+GAWY WRL+  
Subjt:  LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWRLIRN
A0A6J1BSP4 DNA-3-methyladenine glycosylase 1-like4.88e-2459.26Show/hide
Query:  LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWRLI
        L++TLTAVKGI +W V +F+IF+LH+ +VLPVGDLGV KGV+  Y     + +   +EMEKLC+KW+PY SMGAWY WRL+
Subjt:  LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWRLI
A0A6J1GD23 DNA-3-methyladenine glycosylase 1-like4.54e-2460.49Show/hide
Query:  LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWRLI
        LL  LTAVKGI +W V++F+IF LH+ +VLPVGDLGV KGV+  Y     + +   +EMEKLCEKW+PY SMGAWY WRL+
Subjt:  LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWRLI
A0A6J1IQD1 DNA-3-methyladenine glycosylase 1-like1.79e-2359.26Show/hide
Query:  LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWRLI
        LL  LT VKGI +W V++F+IF LH+ +VLPVGDLGV KGV+  Y     + +   +EMEKLCEKW+PY SMGAWY WRL+
Subjt:  LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWRLI
SwissProt top hitse value%identityAlignment
Q92383 DNA-3-methyladenine glycosylase 11.4e-0532.91Show/hide
Query:  LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWR
        L++ LT +KGI  W V + LIF+L++ +V+P  DL +  G R  +       +  +M + K  E   P+ +  AWY W+
Subjt:  LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWR
Arabidopsis top hitse value%identityAlignment
AT1G19480.1 DNA glycosylase superfamily protein2.7e-1549.38Show/hide
Query:  LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWRLI
        L   LT V GI  W V++F+I +LH+ +VLPV DLGV KGV+  Y   D   +    +ME+ C KW PY S+G+WY WRLI
Subjt:  LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWRLI
AT1G19480.2 DNA glycosylase superfamily protein2.7e-1549.38Show/hide
Query:  LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWRLI
        L   LT V GI  W V++F+I +LH+ +VLPV DLGV KGV+  Y   D   +    +ME+ C KW PY S+G+WY WRLI
Subjt:  LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWRLI
AT1G75230.1 DNA glycosylase superfamily protein1.2e-1548.19Show/hide
Query:  LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWRLIRN
        L   LT V GI  W V++F+I +LH+ +VLPV DLGV KGV+   +    E +    +ME+LCEKW PY S+ +WY WRLI +
Subjt:  LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWRLIRN
AT1G75230.2 DNA glycosylase superfamily protein1.2e-1548.19Show/hide
Query:  LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWRLIRN
        L   LT V GI  W V++F+I +LH+ +VLPV DLGV KGV+   +    E +    +ME+LCEKW PY S+ +WY WRLI +
Subjt:  LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWRLIRN
AT3G50880.1 DNA glycosylase superfamily protein1.2e-2053.01Show/hide
Query:  LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWRLIRN
        L+  LT VKGI +W V++F+IF+LH+ +VLPVGDLGV KGV+  Y     + +   ++ME+LCEKW PY S+G+WY WRLI +
Subjt:  LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWRLIRN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTGCTAAAGACATTGACGGCTGTGAAGGGAATCGATCTTTGGTTGGTGTATATATTCTTGATTTTTAACCTGCACCAGTCGAACGTGCTGCCAGTGGGAGATCTCGGCGT
CGGAAAAGGCGTGCGACCGCAGTACGTGAAATGGGATGGAGAAACTGTGAAGGTGGAGATGGAGATGGAAAAACTATGCGAGAAATGGGAGCCGTACACGTCGATGGGAG
CTTGGTACACGTGGAGGCTAATTCGTAAT
mRNA sequenceShow/hide mRNA sequence
CTGCTAAAGACATTGACGGCTGTGAAGGGAATCGATCTTTGGTTGGTGTATATATTCTTGATTTTTAACCTGCACCAGTCGAACGTGCTGCCAGTGGGAGATCTCGGCGT
CGGAAAAGGCGTGCGACCGCAGTACGTGAAATGGGATGGAGAAACTGTGAAGGTGGAGATGGAGATGGAAAAACTATGCGAGAAATGGGAGCCGTACACGTCGATGGGAG
CTTGGTACACGTGGAGGCTAATTCGTAAT
Protein sequenceShow/hide protein sequence
LLKTLTAVKGIDLWLVYIFLIFNLHQSNVLPVGDLGVGKGVRPQYVKWDGETVKVEMEMEKLCEKWEPYTSMGAWYTWRLIRN