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MC00g0096 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC00g0096
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionReverse transcriptase
Genome locationscaffold60:431920..432042
RNA-Seq ExpressionMC00g0096
SyntenyMC00g0096
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063885.1 uncharacterized protein E6C27_scaffold616G00090 [Cucumis melo var. makuwa]6.50e-0471.43Show/hide
Query:  RVDEFSDKVGEIDVVNTRVDGLPKQELDARVDALE
        RVDE S+K   IDVV  RV+GLP QEL ARVDALE
Subjt:  RVDEFSDKVGEIDVVNTRVDGLPKQELDARVDALE

TYK09782.1 uncharacterized protein E5676_scaffold127G00720 [Cucumis melo var. makuwa]4.76e-0458.97Show/hide
Query:  RVDEFSDKVGEIDVVNTRVDGLPKQELDARVDALESKVT
        R+DE S+K+  ID V  RV+GLP QEL ARVD LE+ +T
Subjt:  RVDEFSDKVGEIDVVNTRVDGLPKQELDARVDALESKVT

TYK15920.1 uncharacterized protein E5676_scaffold94G00230 [Cucumis melo var. makuwa]6.50e-0471.43Show/hide
Query:  RVDEFSDKVGEIDVVNTRVDGLPKQELDARVDALE
        RVDE S+K   IDVV  RV+GLP QEL ARVDALE
Subjt:  RVDEFSDKVGEIDVVNTRVDGLPKQELDARVDALE

XP_022150099.1 uncharacterized protein LOC111018360 [Momordica charantia]6.00e-0968.29Show/hide
Query:  RVDEFSDKVGEIDVVNTRVDGLPKQELDARVDALESKVTRP
        RVDEFS+K GEID VN R+DGLP Q++  RV+ LESK TRP
Subjt:  RVDEFSDKVGEIDVVNTRVDGLPKQELDARVDALESKVTRP

XP_022154605.1 uncharacterized protein LOC111021829 [Momordica charantia]2.10e-0868.29Show/hide
Query:  RVDEFSDKVGEIDVVNTRVDGLPKQELDARVDALESKVTRP
        RVDEFS+K GEID VN RVDGLP Q++  RV+  ESK TRP
Subjt:  RVDEFSDKVGEIDVVNTRVDGLPKQELDARVDALESKVTRP

TrEMBL top hitse value%identityAlignment
A0A5A7VDC5 Retrotrans_gag domain-containing protein3.15e-0471.43Show/hide
Query:  RVDEFSDKVGEIDVVNTRVDGLPKQELDARVDALE
        RVDE S+K   IDVV  RV+GLP QEL ARVDALE
Subjt:  RVDEFSDKVGEIDVVNTRVDGLPKQELDARVDALE

A0A5D3CER8 Retrotrans_gag domain-containing protein2.31e-0458.97Show/hide
Query:  RVDEFSDKVGEIDVVNTRVDGLPKQELDARVDALESKVT
        R+DE S+K+  ID V  RV+GLP QEL ARVD LE+ +T
Subjt:  RVDEFSDKVGEIDVVNTRVDGLPKQELDARVDALESKVT

A0A5D3CX39 Retrotrans_gag domain-containing protein3.15e-0471.43Show/hide
Query:  RVDEFSDKVGEIDVVNTRVDGLPKQELDARVDALE
        RVDE S+K   IDVV  RV+GLP QEL ARVDALE
Subjt:  RVDEFSDKVGEIDVVNTRVDGLPKQELDARVDALE

A0A6J1D906 Reverse transcriptase2.91e-0968.29Show/hide
Query:  RVDEFSDKVGEIDVVNTRVDGLPKQELDARVDALESKVTRP
        RVDEFS+K GEID VN R+DGLP Q++  RV+ LESK TRP
Subjt:  RVDEFSDKVGEIDVVNTRVDGLPKQELDARVDALESKVTRP

A0A6J1DK29 uncharacterized protein LOC1110218291.02e-0868.29Show/hide
Query:  RVDEFSDKVGEIDVVNTRVDGLPKQELDARVDALESKVTRP
        RVDEFS+K GEID VN RVDGLP Q++  RV+  ESK TRP
Subjt:  RVDEFSDKVGEIDVVNTRVDGLPKQELDARVDALESKVTRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGAGTTGATGAGTTCTCCGACAAGGTTGGAGAAATAGATGTTGTGAACACTCGAGTAGATGGGCTACCTAAACAAGAACTAGATGCGAGGGTTGACGCCCTAGAAAGTAA
AGTTACACGTCCT
mRNA sequenceShow/hide mRNA sequence
CGAGTTGATGAGTTCTCCGACAAGGTTGGAGAAATAGATGTTGTGAACACTCGAGTAGATGGGCTACCTAAACAAGAACTAGATGCGAGGGTTGACGCCCTAGAAAGTAA
AGTTACACGTCCT
Protein sequenceShow/hide protein sequence
RVDEFSDKVGEIDVVNTRVDGLPKQELDARVDALESKVTRP