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MC00g0101 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC00g0101
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
Genome locationscaffold60:925544..925654
RNA-Seq ExpressionMC00g0101
SyntenyMC00g0101
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042513.1 Pre-mRNA-splicing factor SF2 [Cucumis melo var. makuwa]8.23e-0562.16Show/hide
Query:  SLYKIILKTSAIRIRKVLPSTTSENQGTFVAGRQILD
        S+YKI+ K  A R+RKV+PST  + QG F+AGRQILD
Subjt:  SLYKIILKTSAIRIRKVLPSTTSENQGTFVAGRQILD
KAA0043115.1 periodic tryptophan protein 1-like protein [Cucumis melo var. makuwa]3.20e-0564.86Show/hide
Query:  SLYKIILKTSAIRIRKVLPSTTSENQGTFVAGRQILD
        S+YKI  K  A R+RKVLPST S+ QG F+ GRQILD
Subjt:  SLYKIILKTSAIRIRKVLPSTTSENQGTFVAGRQILD
KAA0054311.1 golgin subfamily A member 6-like protein 22 isoform X2 [Cucumis melo var. makuwa]1.12e-0464.86Show/hide
Query:  SLYKIILKTSAIRIRKVLPSTTSENQGTFVAGRQILD
        S+YKI+ K  A R+RKVLPST SE QG F+ G QILD
Subjt:  SLYKIILKTSAIRIRKVLPSTTSENQGTFVAGRQILD
TYJ96216.1 periodic tryptophan protein 1-like protein [Cucumis melo var. makuwa]3.21e-0564.86Show/hide
Query:  SLYKIILKTSAIRIRKVLPSTTSENQGTFVAGRQILD
        S+YKI  K  A R+RKVLPST S+ QG F+ GRQILD
Subjt:  SLYKIILKTSAIRIRKVLPSTTSENQGTFVAGRQILD
TYK05916.1 uncharacterized protein E5676_scaffold376G00070 [Cucumis melo var. makuwa]8.26e-0562.16Show/hide
Query:  SLYKIILKTSAIRIRKVLPSTTSENQGTFVAGRQILD
        S+YKI+ K  A R+RKV+PST  + QG F+AGRQILD
Subjt:  SLYKIILKTSAIRIRKVLPSTTSENQGTFVAGRQILD
TrEMBL top hitse value%identityAlignment
A0A5A7TGZ1 Pre-mRNA-splicing factor SF23.98e-0562.16Show/hide
Query:  SLYKIILKTSAIRIRKVLPSTTSENQGTFVAGRQILD
        S+YKI+ K  A R+RKV+PST  + QG F+AGRQILD
Subjt:  SLYKIILKTSAIRIRKVLPSTTSENQGTFVAGRQILD
A0A5A7TNX2 Periodic tryptophan protein 1-like protein1.55e-0564.86Show/hide
Query:  SLYKIILKTSAIRIRKVLPSTTSENQGTFVAGRQILD
        S+YKI  K  A R+RKVLPST S+ QG F+ GRQILD
Subjt:  SLYKIILKTSAIRIRKVLPSTTSENQGTFVAGRQILD
A0A5A7UL95 Golgin subfamily A member 6-like protein 22 isoform X25.45e-0564.86Show/hide
Query:  SLYKIILKTSAIRIRKVLPSTTSENQGTFVAGRQILD
        S+YKI+ K  A R+RKVLPST SE QG F+ G QILD
Subjt:  SLYKIILKTSAIRIRKVLPSTTSENQGTFVAGRQILD
A0A5D3BBF1 Periodic tryptophan protein 1-like protein1.55e-0564.86Show/hide
Query:  SLYKIILKTSAIRIRKVLPSTTSENQGTFVAGRQILD
        S+YKI  K  A R+RKVLPST S+ QG F+ GRQILD
Subjt:  SLYKIILKTSAIRIRKVLPSTTSENQGTFVAGRQILD
A0A5D3C6E7 Reverse transcriptase domain-containing protein4.00e-0562.16Show/hide
Query:  SLYKIILKTSAIRIRKVLPSTTSENQGTFVAGRQILD
        S+YKI+ K  A R+RKV+PST  + QG F+AGRQILD
Subjt:  SLYKIILKTSAIRIRKVLPSTTSENQGTFVAGRQILD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGCTTATACAAGATAATATTGAAAACTTCGGCTATTCGGATTAGAAAGGTCCTTCCTAGCACCACATCCGAAAATCAAGGCACCTTCGTCGCTGGAAGGCAAATCTTGGA
C
mRNA sequenceShow/hide mRNA sequence
AGCTTATACAAGATAATATTGAAAACTTCGGCTATTCGGATTAGAAAGGTCCTTCCTAGCACCACATCCGAAAATCAAGGCACCTTCGTCGCTGGAAGGCAAATCTTGGA
C
Protein sequenceShow/hide protein sequence
SLYKIILKTSAIRIRKVLPSTTSENQGTFVAGRQILD