; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC00g0149 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC00g0149
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionDNA-directed RNA polymerases I and III subunit RPAC1
Genome locationscaffold15:549880..563686
RNA-Seq ExpressionMC00g0149
SyntenyMC00g0149
Gene Ontology termsGO:0006360 - transcription by RNA polymerase I (biological process)
GO:0006383 - transcription by RNA polymerase III (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0005736 - RNA polymerase I complex (cellular component)
GO:0001054 - RNA polymerase I activity (molecular function)
GO:0001056 - RNA polymerase III activity (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR001514 - DNA-directed RNA polymerase, 30-40kDa subunit, conserved site
IPR011262 - DNA-directed RNA polymerase, insert domain
IPR011263 - DNA-directed RNA polymerase, RpoA/D/Rpb3-type
IPR033901 - DNA-directed RNA polymerases I and III subunit AC40
IPR036603 - RNA polymerase, RBP11-like subunit
IPR036643 - DNA-directed RNA polymerase, insert domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7028290.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita argyrosperma subsp. argyrosperma]1.05e-25790.91Show/hide
Query:  KSLHNMSDSESEQVAGKEGIEWIMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIEFDMIGI
        K+LHNMS+S+SEQ  GKEGIEWIMNLPDVPMKLPPH+E+QRTRVECKADAPIHTDTIQYSGAYAS+G+DNSLRLD FR NFKIEVIDL EDD+EFDMIGI
Subjt:  KSLHNMSDSESEQVAGKEGIEWIMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIEFDMIGI

Query:  DPALANAFRRILIAEVPTMAIEKVLVANNTSLIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLPNGSEFP
        DP+LANAFRRILIAEVPTMAIEKVLVANNTS++QDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGKPRLT TSK LTWLPNGSEFP
Subjt:  DPALANAFRRILIAEVPTMAIEKVLVANNTSLIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLPNGSEFP

Query:  LVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAEELKKKC
        LVSDKSV N+KPKTYTSFSCSQDTLPEF+NN IGPKD DII+ARL  GQEIELEAHAVKGMGKTHAKWSPVATAWY+MLPEVVL E+IEDELAEELK KC
Subjt:  LVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAEELKKKC

Query:  PVDVFDIEDIANGKKRAIVARPRSCTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        PV+VFDIEDIANGKKRA VARPR+CTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  PVDVFDIEDIANGKKRAIVARPRSCTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

XP_022158557.1 DNA-directed RNA polymerases I and III subunit RPAC1-like isoform X1 [Momordica charantia]3.16e-277100Show/hide
Query:  MSDSESEQVAGKEGIEWIMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALA
        MSDSESEQVAGKEGIEWIMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALA
Subjt:  MSDSESEQVAGKEGIEWIMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALA

Query:  NAFRRILIAEVPTMAIEKVLVANNTSLIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLPNGSEFPLVSDK
        NAFRRILIAEVPTMAIEKVLVANNTSLIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLPNGSEFPLVSDK
Subjt:  NAFRRILIAEVPTMAIEKVLVANNTSLIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLPNGSEFPLVSDK

Query:  SVPNSKPKTYTSFSCSQDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAEELKKKCPVDVF
        SVPNSKPKTYTSFSCSQDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAEELKKKCPVDVF
Subjt:  SVPNSKPKTYTSFSCSQDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAEELKKKCPVDVF

Query:  DIEDIANGKKRAIVARPRSCTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        DIEDIANGKKRAIVARPRSCTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  DIEDIANGKKRAIVARPRSCTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

XP_022158862.1 LOW QUALITY PROTEIN: DNA-directed RNA polymerases I and III subunit RPAC1-like [Momordica charantia]1.89e-26091.54Show/hide
Query:  VSAIDKSLHNMSDSESEQVAGKEGIEWIMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIEF
        +SA DK   ++  S+ EQ  GKEGIEWIMNLPDVPMKLPPHLE+ RTRVECKADAPIHTDTIQYSGAYASMGVDNSL+LDYFRNNFKIEVIDLGEDDIEF
Subjt:  VSAIDKSLHNMSDSESEQVAGKEGIEWIMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIEF

Query:  DMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSLIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLPN
        DMIGIDPALANAFRR LIAEVPTMAIEKVLVANNTS+IQDEVLAHRLGL+PIHVDPRLFEYSD+DTPNEKNTIVFRLHARCERGKPRLTVTSK LTWLPN
Subjt:  DMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSLIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLPN

Query:  GSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAEE
        GSEFPLVSDKSVPNSKPKTYTSFSCSQD LPEFS N IGPKD+DIIIARL PGQEIELEAHAVKGMGKTHAKWSPVATAWY+MLPEVVL EEIEDELAEE
Subjt:  GSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAEE

Query:  LKKKCPVDVFDIEDIANGKKRAIVARPRSCTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        LK KCPVDVFDIEDIANGKKRA V RPRSCTLCRECIRGEAWEKRVSLRRVK+HFIFKIESTGALPPEVLFTEA+KILEDKCERLIAELS
Subjt:  LKKKCPVDVFDIEDIANGKKRAIVARPRSCTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

XP_022936430.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita moschata]4.42e-25790.03Show/hide
Query:  VSAIDKSLHNMSDSESEQV-AGKEGIEWIMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIE
        +S  DK+LHNMS+S+SEQ   GKEGIEWIMNLPDVPMKLPPH+E+QRTRVECKADAPIHTDTIQYSGAYAS+G+DNSLRLD FR NFKIEVIDL EDD+E
Subjt:  VSAIDKSLHNMSDSESEQV-AGKEGIEWIMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSLIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLP
        FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTS++QDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGKPRLT TSK LTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSLIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLP

Query:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAE
        NGSEFPLVSDKSV N+KPKTYTSFSCSQDTLPEF+NN IGPKD DII+ARL  GQEIELEAHAVKGMGKTHAKWSPVATAWY+MLPEVVL E+IEDELAE
Subjt:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAE

Query:  ELKKKCPVDVFDIEDIANGKKRAIVARPRSCTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        ELK KCPV+VFDIEDIANGKKRA VARPR+CTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  ELKKKCPVDVFDIEDIANGKKRAIVARPRSCTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

XP_038903474.1 DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1 [Benincasa hispida]1.33e-26092.33Show/hide
Query:  VSAIDKSLHNMSDSESEQVA-GKEGIEWIMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIE
        +S  DKSLHNMSDSESEQ    KEGIEWIMNLPDVPMKLPPHLE+QRTRVECKADAPIHTDTIQYSGA+ASMGVDNSLRLDYFRNNFKIEVIDL EDDIE
Subjt:  VSAIDKSLHNMSDSESEQVA-GKEGIEWIMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSLIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLP
        FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTS++QDEVLAHRLGL+PIHVDPRLFEYSDKDTPNEKNTIVFRLHA CERGK RLTVTSK LTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSLIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLP

Query:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAE
        NGSEFPLVSDKSV NSKPKTYTSFSCSQDTLPEFSNN IGPKD+DII+ARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWY+MLPEVVL EEI+DELAE
Subjt:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAE

Query:  ELKKKCPVDVFDIEDIANGKKRAIVARPRSCTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        ELKKKCPV+VFDIEDIA GKKRA VARPR+CTLCRECIRG+ WEKRV+LRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  ELKKKCPVDVFDIEDIANGKKRAIVARPRSCTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

TrEMBL top hitse value%identityAlignment
A0A0A0L637 DNA-directed RNA polymerases I and III subunit RPAC11.54e-25089.29Show/hide
Query:  VSAIDKSLHNMSDSESEQVA-GKEGIEWIMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIE
        +S  DK+LHNMS+SESEQ    KEGIEWIMNLPDVPMKLPPH+E+QRTRVECKADAPIHTDTIQYSGA+ASMG DNSLRLD FRNNFKIEVIDL EDDIE
Subjt:  VSAIDKSLHNMSDSESEQVA-GKEGIEWIMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSLIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLP
        FDMIGIDPALANAFRRILI+EVPTMAIEKVL ANNTS++QDEVLAHRLGL+PI VDPRLF+YSDKD PNE NTIVFRLHA CERGKPRLTVTSK LTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSLIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLP

Query:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLP-EFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELA
        NGSEFPLVSDKSV NSKPKTYTSFSCSQ+TL  EFSNN IGPKD+DII+ARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWY+MLPEVVL EEIEDELA
Subjt:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLP-EFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELA

Query:  EELKKKCPVDVFDIEDIANGKKRAIVARPRSCTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        EEL+KKCPV+VFDIEDIA GKKRA VARPR CTLCRECIRG+AWEKRV+LRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  EELKKKCPVDVFDIEDIANGKKRAIVARPRSCTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

A0A6J1DXI7 DNA-directed RNA polymerases I and III subunit RPAC11.53e-277100Show/hide
Query:  MSDSESEQVAGKEGIEWIMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALA
        MSDSESEQVAGKEGIEWIMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALA
Subjt:  MSDSESEQVAGKEGIEWIMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALA

Query:  NAFRRILIAEVPTMAIEKVLVANNTSLIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLPNGSEFPLVSDK
        NAFRRILIAEVPTMAIEKVLVANNTSLIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLPNGSEFPLVSDK
Subjt:  NAFRRILIAEVPTMAIEKVLVANNTSLIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLPNGSEFPLVSDK

Query:  SVPNSKPKTYTSFSCSQDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAEELKKKCPVDVF
        SVPNSKPKTYTSFSCSQDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAEELKKKCPVDVF
Subjt:  SVPNSKPKTYTSFSCSQDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAEELKKKCPVDVF

Query:  DIEDIANGKKRAIVARPRSCTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        DIEDIANGKKRAIVARPRSCTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  DIEDIANGKKRAIVARPRSCTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

A0A6J1DY99 DNA-directed RNA polymerases I and III subunit RPAC19.15e-26191.54Show/hide
Query:  VSAIDKSLHNMSDSESEQVAGKEGIEWIMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIEF
        +SA DK   ++  S+ EQ  GKEGIEWIMNLPDVPMKLPPHLE+ RTRVECKADAPIHTDTIQYSGAYASMGVDNSL+LDYFRNNFKIEVIDLGEDDIEF
Subjt:  VSAIDKSLHNMSDSESEQVAGKEGIEWIMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIEF

Query:  DMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSLIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLPN
        DMIGIDPALANAFRR LIAEVPTMAIEKVLVANNTS+IQDEVLAHRLGL+PIHVDPRLFEYSD+DTPNEKNTIVFRLHARCERGKPRLTVTSK LTWLPN
Subjt:  DMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSLIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLPN

Query:  GSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAEE
        GSEFPLVSDKSVPNSKPKTYTSFSCSQD LPEFS N IGPKD+DIIIARL PGQEIELEAHAVKGMGKTHAKWSPVATAWY+MLPEVVL EEIEDELAEE
Subjt:  GSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAEE

Query:  LKKKCPVDVFDIEDIANGKKRAIVARPRSCTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        LK KCPVDVFDIEDIANGKKRA V RPRSCTLCRECIRGEAWEKRVSLRRVK+HFIFKIESTGALPPEVLFTEA+KILEDKCERLIAELS
Subjt:  LKKKCPVDVFDIEDIANGKKRAIVARPRSCTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

A0A6J1FDA3 DNA-directed RNA polymerases I and III subunit RPAC12.14e-25790.03Show/hide
Query:  VSAIDKSLHNMSDSESEQV-AGKEGIEWIMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIE
        +S  DK+LHNMS+S+SEQ   GKEGIEWIMNLPDVPMKLPPH+E+QRTRVECKADAPIHTDTIQYSGAYAS+G+DNSLRLD FR NFKIEVIDL EDD+E
Subjt:  VSAIDKSLHNMSDSESEQV-AGKEGIEWIMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSLIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLP
        FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTS++QDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGKPRLT TSK LTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSLIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLP

Query:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAE
        NGSEFPLVSDKSV N+KPKTYTSFSCSQDTLPEF+NN IGPKD DII+ARL  GQEIELEAHAVKGMGKTHAKWSPVATAWY+MLPEVVL E+IEDELAE
Subjt:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAE

Query:  ELKKKCPVDVFDIEDIANGKKRAIVARPRSCTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        ELK KCPV+VFDIEDIANGKKRA VARPR+CTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  ELKKKCPVDVFDIEDIANGKKRAIVARPRSCTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

A0A6J1L269 DNA-directed RNA polymerases I and III subunit RPAC16.12e-25790.03Show/hide
Query:  VSAIDKSLHNMSDSESEQV-AGKEGIEWIMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIE
        +S  DK+LH+MS+S+SEQ   GKEGIEWIMNLPDVPMKLPPH+E+QRTRVECKADAPIHTDTIQYSGAYAS+G+DNSLRLD FR NFKIEVIDL EDD+E
Subjt:  VSAIDKSLHNMSDSESEQV-AGKEGIEWIMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSLIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLP
        FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTS++QDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGKPRLT TS+ LTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSLIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLP

Query:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAE
        NGSEFPLVSDKSV NSKPKTYTSFSCSQDTLPEF+NN IGPKD DII+ARL  GQEIELEAHAVKGMGKTHAKWSPVATAWY+MLPEVVL EEIEDELAE
Subjt:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAE

Query:  ELKKKCPVDVFDIEDIANGKKRAIVARPRSCTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        ELK KCPV+VFDIEDIANGKKRA VARPR+CTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  ELKKKCPVDVFDIEDIANGKKRAIVARPRSCTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

SwissProt top hitse value%identityAlignment
O15160 DNA-directed RNA polymerases I and III subunit RPAC11.3e-7745.45Show/hide
Query:  LEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSLIQDE
        +E  R+RV        +  T  + G Y+  G D++   D F  NF+++V+ + E+ +EFDM+GID A+ANAFRRIL+AEVPTMA+EKVLV NNTS++QDE
Subjt:  LEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSLIQDE

Query:  VLAHRLGLIPIHVDPRLFEYSDK--DTPNEKNTIVFRLHARCERG---------KPRLTVTSKL----LTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCS
        +LAHRLGLIPIH DPRLFEY ++  +   E +T+ FRL  RC R             L V  K+    +TW+P G++  L                    
Subjt:  VLAHRLGLIPIHVDPRLFEYSDK--DTPNEKNTIVFRLHARCERG---------KPRLTVTSKL----LTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCS

Query:  QDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAEELKKKCPVDVFDIEDIANGKKRAIVAR
              F   +I P  +DI+IA+L PGQEI+L  H VKG+GK HAK+SPVATA Y++LP++ L E +E E AEEL +     V +++++  GKK A VA 
Subjt:  QDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAEELKKKCPVDVFDIEDIANGKKRAIVAR

Query:  PRSCTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL
        PR  T  RE  R E  +K V L RV+DH+IF +ESTG LPP+VL +EA+K+L  KC R + EL
Subjt:  PRSCTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL

O94616 DNA-directed RNA polymerases I and III subunit RPAC12.9e-6438.06Show/hide
Query:  LEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSLIQDE
        ++  RT +   +D      ++ + G Y     DN   LD F+ N K+ +  L ++ + F++ GID ++ANAFRRILIAE+PT+A E V + NNTS+IQDE
Subjt:  LEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSLIQDE

Query:  VLAHRLGLIPIHVDPRLFEYSDKDTPNEK------NTIVFRLHARCERGK---------PRLTVTSKL----LTWLPNGSEFPLVSDKSVPNSKPKTYTS
        VL+HR+GL+PI  DP +F++     P ++      +T+VF L+ +CE  K          RL V S++    L W P G +                   
Subjt:  VLAHRLGLIPIHVDPRLFEYSDKDTPNEK------NTIVFRLHARCERGK---------PRLTVTSKL----LTWLPNGSEFPLVSDKSVPNSKPKTYTS

Query:  FSCSQDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAEELKKKCPVDVFDIEDIANGKKRA
                  F++N I   + DI++A+L PGQEI+LEAHA+ G+G+ HAK+SPVATA Y++LP + +   IE E A + +K  P  V ++E+  +GKK+A
Subjt:  FSCSQDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAEELKKKCPVDVFDIEDIANGKKRA

Query:  IVARPRSCTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKC
         VA  R  T+ REC+R   +  +V L RV+DH++F +ESTG + P+VLF +++ +L+ KC
Subjt:  IVARPRSCTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKC

P52432 DNA-directed RNA polymerases I and III subunit RPAC11.5e-7646.8Show/hide
Query:  LEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSLIQDE
        +E  RTRV        +  T  + G YA  G D++   + F  NF+++V+ + ED +EFDM+GID A+ANAFRRIL+AEVPTMA+EKVLV NNTS++QDE
Subjt:  LEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSLIQDE

Query:  VLAHRLGLIPIHVDPRLFEYSD--KDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLPNGSEFPLVSDKSVPN---------SKPKTYTSFSCSQDTL
        +LAHRLGLIPI  DPRLFEY +  ++   E +T+ FRL  RC R               PN ++     D S PN         ++  T+       D  
Subjt:  VLAHRLGLIPIHVDPRLFEYSD--KDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLPNGSEFPLVSDKSVPN---------SKPKTYTSFSCSQDTL

Query:  PEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAEELKKKCPVDVFDIEDIANGKKRAIVARPRSC
        PE    +I P  +DI+IA+L PGQEI+L  H VKG+GK HAK+SPVATA Y++LP + L E +E E AEEL +     V ++E++  GKK A VA  R  
Subjt:  PEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAEELKKKCPVDVFDIEDIANGKKRAIVARPRSC

Query:  TLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL
        T  RE  R E  +K V L RV+DH+IF +ESTG LPP+VL +EA+KIL  KC R + EL
Subjt:  TLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL

Q32L22 DNA-directed RNA polymerases I and III subunit RPAC13.5e-7846.8Show/hide
Query:  LEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSLIQDE
        +E  RTRV        +  T  + G Y+  G D++   D F  NF+++V+ + E+ +EFDM+GID A+ANAFRRIL+AEVPTMA+EKVLV NNTS++QDE
Subjt:  LEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSLIQDE

Query:  VLAHRLGLIPIHVDPRLFEYSDK--DTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLPNGSEFPLVSDKSVPN---------SKPKTYTSFSCSQDTL
        +LAHRLGLIPIH DPRLFEY ++  +   E +T+ FRL  RC R               P+ ++     D S PN         ++  T+       D  
Subjt:  VLAHRLGLIPIHVDPRLFEYSDK--DTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLPNGSEFPLVSDKSVPN---------SKPKTYTSFSCSQDTL

Query:  PEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAEELKKKCPVDVFDIEDIANGKKRAIVARPRSC
        PE    +I P  +DI+IA+L PGQEI+L  H VKG+GK HAK+SPVATA Y++LP++ L E +E E AEEL +     V ++++I  GKK A VA PR  
Subjt:  PEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAEELKKKCPVDVFDIEDIANGKKRAIVARPRSC

Query:  TLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL
        T  RE  R E  +K V L RV+DHFIF +ESTG LPP+VL +EA+K+L  KC+R + EL
Subjt:  TLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL

Q54SN4 DNA-directed RNA polymerases I and III subunit rpac14.4e-7342.61Show/hide
Query:  PHLEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSLIQ
        P+LE +RT+V        +     YSGAY S+G DNS  L+ F+ NFKI ++    +++ F+MIGID  +ANA RRI+I+E+PTMAIEKV + NNTS++Q
Subjt:  PHLEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSLIQ

Query:  DEVLAHRLGLIPIHVDPRLFEYSDKDTPNE----KNTIVFRLHARCER----GK-PRLTVTSKLLTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCSQDTL
        DEVLAHRLG+IPI VDPR F +     PN+    ++T++F+L  +CE+    GK    T  SK L W+P   +     ++  PN + +            
Subjt:  DEVLAHRLGLIPIHVDPRLFEYSDKDTPNE----KNTIVFRLHARCER----GK-PRLTVTSKLLTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCSQDTL

Query:  PEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAEELKKKCPVDVFDIEDIANGKKRAIVARPRSC
                 P ++DI I +L PGQ I+++ +  K +G+ H KWSPV TA Y++ P + + + I+ + A +L +KCP  VFDIED      + + ARP  C
Subjt:  PEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAEELKKKCPVDVFDIEDIANGKKRAIVARPRSC

Query:  TLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKC
        T+CRECIR   +E+ V + RV+DHFIF IESTGAL    +F EA+KI  +KC
Subjt:  TLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKC

Arabidopsis top hitse value%identityAlignment
AT1G60620.1 RNA polymerase I subunit 433.9e-14168.77Show/hide
Query:  IMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAIE
        I +LPDVP  LPPHLE+QRTRV CK D+ IH   I +SGAY+SMGVDNS+RL+ F  +FK++VI L E D+ FDMIG+   +ANAFRRIL+AE+P+MAIE
Subjt:  IMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAIE

Query:  KVLVANNTSLIQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCS
        KV VANNTS+IQDEVLAHRLGLIPI  DPRLFEY S+ D PNEKNTIVF+LH +C +G PR  V +  L WLPNGSE  L+ +     + PKTYTSF+ S
Subjt:  KVLVANNTSLIQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCS

Query:  QDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAEELKKKCPVDVFDIEDIANGKKRAIVAR
        QD+ PEF+ N I P   DI+IA+LGPGQEIELEAHAVKG+GKTHAKWSPVATAWY+MLPEVVL +E E + AEEL K CP  VFDIED+  G+KRA VAR
Subjt:  QDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAEELKKKCPVDVFDIEDIANGKKRAIVAR

Query:  PRSCTLCRECIR-GEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        PR C+LCRECIR G  WE +V LRRVK+HFIF IESTG+ PPEVLF EAVKILEDKCER+I+ELS
Subjt:  PRSCTLCRECIR-GEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

AT1G60850.1 DNA-directed RNA polymerase family protein1.3e-13166.11Show/hide
Query:  IMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAY-ASMGVDNSLRLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAI
        I +LPDVP  LPPHL+ Q+TRV  K +AP HT +  YSG Y +S   D++++L  F +NFK++V+ L + D+EFDMIGID A ANAFRRILIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAY-ASMGVDNSLRLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAI

Query:  EKVLVANNTSLIQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLPNGSEFPLVSDKSVPNSKPKTYTSFSC
        EKVL+A NTS+I DEVLAHR+GLIPI  DPRLFEY S+ D  NEKNTIVF+LH +C + +PRL V +  L WLPNGSE  L+ +     SKPKTYTSFSC
Subjt:  EKVLVANNTSLIQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLPNGSEFPLVSDKSVPNSKPKTYTSFSC

Query:  SQDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAEELKKKCPVDVFDIEDIANGKKRAIVA
        SQD+LPEF+NN I P D DI+IA+L PGQEIELEAHAVKG+GKTHAKWSPV TAWY+M PEVVL  E+EDELAE L   CP +VFDIED+  GKKRA VA
Subjt:  SQDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAEELKKKCPVDVFDIEDIANGKKRAIVA

Query:  RPRSCTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERL
        +PR CTLC+EC+R +     V L  VK+HFIF IESTG+LPPEVLFTEAVKILE KCE +
Subjt:  RPRSCTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERL

AT1G60850.2 DNA-directed RNA polymerase family protein1.3e-13166.11Show/hide
Query:  IMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAY-ASMGVDNSLRLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAI
        I +LPDVP  LPPHL+ Q+TRV  K +AP HT +  YSG Y +S   D++++L  F +NFK++V+ L + D+EFDMIGID A ANAFRRILIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAY-ASMGVDNSLRLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAI

Query:  EKVLVANNTSLIQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLPNGSEFPLVSDKSVPNSKPKTYTSFSC
        EKVL+A NTS+I DEVLAHR+GLIPI  DPRLFEY S+ D  NEKNTIVF+LH +C + +PRL V +  L WLPNGSE  L+ +     SKPKTYTSFSC
Subjt:  EKVLVANNTSLIQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLPNGSEFPLVSDKSVPNSKPKTYTSFSC

Query:  SQDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAEELKKKCPVDVFDIEDIANGKKRAIVA
        SQD+LPEF+NN I P D DI+IA+L PGQEIELEAHAVKG+GKTHAKWSPV TAWY+M PEVVL  E+EDELAE L   CP +VFDIED+  GKKRA VA
Subjt:  SQDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAEELKKKCPVDVFDIEDIANGKKRAIVA

Query:  RPRSCTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERL
        +PR CTLC+EC+R +     V L  VK+HFIF IESTG+LPPEVLFTEAVKILE KCE +
Subjt:  RPRSCTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERL

AT1G60850.3 DNA-directed RNA polymerase family protein6.8e-9366.03Show/hide
Query:  IMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAY-ASMGVDNSLRLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAI
        I +LPDVP  LPPHL+ Q+TRV  K +AP HT +  YSG Y +S   D++++L  F +NFK++V+ L + D+EFDMIGID A ANAFRRILIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAY-ASMGVDNSLRLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAI

Query:  EKVLVANNTSLIQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLPNGSEFPLVSDKSVPNSKPKTYTSFSC
        EKVL+A NTS+I DEVLAHR+GLIPI  DPRLFEY S+ D  NEKNTIVF+LH +C + +PRL V +  L WLPNGSE  L+ +     SKPKTYTSFSC
Subjt:  EKVLVANNTSLIQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLPNGSEFPLVSDKSVPNSKPKTYTSFSC

Query:  SQDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEV
        SQD+LPEF+NN I P D DI+IA+L PGQEIELEAHAVKG+GKTHAKWSPV TAWY+M PEV
Subjt:  SQDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEV

AT2G15430.1 DNA-directed RNA polymerase family protein2.1e-3332.48Show/hide
Query:  KIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSLIQDEVLAHRLGLIPIHVD-------PRLFEYSDKDTPNEKNTIVFRLHA
        KI++ +L +D  +F++   D ++ANA RR++I+EVPT+AI+ V +  N+S++ DE +AHRLGLIP+  +        R  +  D D   E  ++ FRL +
Subjt:  KIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSLIQDEVLAHRLGLIPIHVD-------PRLFEYSDKDTPNEKNTIVFRLHA

Query:  RCERGKPRLTVTSKLLTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATA
        +C   +  L VTS+ L               + P   P  +T  S   D+           +   III +L  GQE++L A A KG+GK HAKWSP AT 
Subjt:  RCERGKPRLTVTSKLLTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATA

Query:  WYKMLPEVVLSEEIEDELAEELK----KKCPVDVFDIEDIANGKKRAIVARPRSCTLCRECI-RGEAWEK--RVSLRRVKDHFIFKIESTGALPPEVLFT
         +   P+++++E++ D L++E K    +  P  VF ++ +    ++ +V  P + T   E I + EA  K   + +    D FIF +ESTGA+    L  
Subjt:  WYKMLPEVVLSEEIEDELAEELK----KKCPVDVFDIEDIANGKKRAIVARPRSCTLCRECI-RGEAWEK--RVSLRRVKDHFIFKIESTGALPPEVLFT

Query:  EAVKILEDKCE
         A+ +L+ K +
Subjt:  EAVKILEDKCE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGTCTGCTATAGATAAAAGCTTGCATAATATGTCGGACTCGGAATCTGAACAAGTTGCAGGAAAAGAAGGCATTGAATGGATAATGAATCTTCCAGATGTGCCCATGAA
GCTCCCACCGCACCTAGAAATGCAGAGGACCCGAGTCGAATGCAAAGCCGATGCTCCCATTCATACAGATACCATACAGTATTCTGGAGCATATGCTTCGATGGGTGTTG
ATAACAGTTTACGACTGGATTATTTTCGCAACAACTTTAAAATTGAAGTGATTGATTTAGGAGAGGATGACATTGAGTTCGACATGATCGGTATTGACCCAGCACTCGCT
AATGCATTTCGTAGAATCCTTATAGCTGAGGTTCCCACTATGGCTATTGAAAAAGTTCTTGTTGCTAACAATACATCATTAATCCAAGATGAAGTGCTTGCCCATAGGTT
AGGCCTCATTCCGATTCATGTTGATCCAAGGCTTTTCGAGTACTCAGATAAAGACACACCAAATGAGAAGAATACCATTGTTTTTAGACTCCATGCTCGCTGTGAACGTG
GAAAACCTCGTCTTACAGTGACATCAAAATTATTGACGTGGTTACCAAATGGTAGTGAATTTCCCTTGGTATCAGACAAATCAGTTCCAAACTCAAAACCCAAAACATAT
ACTTCTTTTAGTTGCAGCCAAGACACACTACCAGAATTTTCCAACAATTCAATTGGTCCAAAGGACAATGATATTATAATTGCTAGACTTGGCCCGGGTCAGGAAATTGA
ACTTGAAGCTCATGCTGTTAAAGGTATGGGTAAAACACACGCTAAGTGGTCCCCGGTGGCCACTGCTTGGTACAAGATGCTTCCTGAGGTTGTACTTTCGGAGGAGATAG
AGGATGAGTTGGCTGAAGAACTCAAAAAGAAATGTCCTGTTGATGTATTTGACATTGAAGACATTGCTAATGGTAAGAAAAGGGCAATTGTAGCACGCCCCAGATCTTGC
ACACTGTGTAGAGAATGCATAAGAGGAGAAGCATGGGAGAAACGTGTCTCATTGCGTCGTGTGAAGGATCATTTCATTTTTAAGATTGAATCAACAGGAGCTTTACCTCC
TGAGGTGCTGTTCACTGAAGCTGTAAAGATTTTGGAAGATAAGTGTGAACGTTTAATTGCTGAGCTCTCTTGA
mRNA sequenceShow/hide mRNA sequence
GTGTCTGCTATAGATAAAAGCTTGCATAATATGTCGGACTCGGAATCTGAACAAGTTGCAGGAAAAGAAGGCATTGAATGGATAATGAATCTTCCAGATGTGCCCATGAA
GCTCCCACCGCACCTAGAAATGCAGAGGACCCGAGTCGAATGCAAAGCCGATGCTCCCATTCATACAGATACCATACAGTATTCTGGAGCATATGCTTCGATGGGTGTTG
ATAACAGTTTACGACTGGATTATTTTCGCAACAACTTTAAAATTGAAGTGATTGATTTAGGAGAGGATGACATTGAGTTCGACATGATCGGTATTGACCCAGCACTCGCT
AATGCATTTCGTAGAATCCTTATAGCTGAGGTTCCCACTATGGCTATTGAAAAAGTTCTTGTTGCTAACAATACATCATTAATCCAAGATGAAGTGCTTGCCCATAGGTT
AGGCCTCATTCCGATTCATGTTGATCCAAGGCTTTTCGAGTACTCAGATAAAGACACACCAAATGAGAAGAATACCATTGTTTTTAGACTCCATGCTCGCTGTGAACGTG
GAAAACCTCGTCTTACAGTGACATCAAAATTATTGACGTGGTTACCAAATGGTAGTGAATTTCCCTTGGTATCAGACAAATCAGTTCCAAACTCAAAACCCAAAACATAT
ACTTCTTTTAGTTGCAGCCAAGACACACTACCAGAATTTTCCAACAATTCAATTGGTCCAAAGGACAATGATATTATAATTGCTAGACTTGGCCCGGGTCAGGAAATTGA
ACTTGAAGCTCATGCTGTTAAAGGTATGGGTAAAACACACGCTAAGTGGTCCCCGGTGGCCACTGCTTGGTACAAGATGCTTCCTGAGGTTGTACTTTCGGAGGAGATAG
AGGATGAGTTGGCTGAAGAACTCAAAAAGAAATGTCCTGTTGATGTATTTGACATTGAAGACATTGCTAATGGTAAGAAAAGGGCAATTGTAGCACGCCCCAGATCTTGC
ACACTGTGTAGAGAATGCATAAGAGGAGAAGCATGGGAGAAACGTGTCTCATTGCGTCGTGTGAAGGATCATTTCATTTTTAAGATTGAATCAACAGGAGCTTTACCTCC
TGAGGTGCTGTTCACTGAAGCTGTAAAGATTTTGGAAGATAAGTGTGAACGTTTAATTGCTGAGCTCTCTTGATTCTTACCATGGATAACCAAAAGAGATCAACATGTAC
ATTATTCCATTATATTCAGAAGTCACCAATTTTTGCAGTATACGAGATCTCTTGTTCTATTTTTCCTTTGAAAAGACACTGGAATAGTAAGTTTTGTTGAGCTCTCTTGA
TTCCTCCTAAATTTTATGAATGTCGGCTGGGAAGTGGTCAAATAAGAGAACAGACAAAGATTATGTTATTGTTTCAATGGAAATTTGATAATTTATTGTCTTGGACATGA
AAAGAAAACAATCTCAATTTATTTAGAAAAAAATTTACTTAACTTCTGAATGAATGTCCAAAGATGTTATTGTGGAATGGTTTATACATATGTTTACTGCAGAG
Protein sequenceShow/hide protein sequence
VSAIDKSLHNMSDSESEQVAGKEGIEWIMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAYASMGVDNSLRLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALA
NAFRRILIAEVPTMAIEKVLVANNTSLIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKLLTWLPNGSEFPLVSDKSVPNSKPKTY
TSFSCSQDTLPEFSNNSIGPKDNDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAEELKKKCPVDVFDIEDIANGKKRAIVARPRSC
TLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS