; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC00g0163 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC00g0163
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionribosomal RNA small subunit methyltransferase NEP1
Genome locationscaffold15:908123..910390
RNA-Seq ExpressionMC00g0163
SyntenyMC00g0163
Gene Ontology termsGO:0070475 - rRNA base methylation (biological process)
GO:0019843 - rRNA binding (molecular function)
GO:0070037 - rRNA (pseudouridine) methyltransferase activity (molecular function)
InterPro domainsIPR005304 - Ribosomal biogenesis, methyltransferase, EMG1/NEP1
IPR029026 - tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR029028 - Alpha/beta knot methyltransferases


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017643.1 Ribosomal RNA small subunit methyltransferase NEP1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.11e-14078.29Show/hide
Query:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDGEPP----KEDFHELEGIPVVPKDPRSDNTAGAIFVLERASLEVAKVGKSYQLLNSD
        MVRPFAAKGKKRKKTE+YDR  +DDGE   A  KK MVENEPD +P     +E+FHELEGIP+VPKDP+SD+ AG IFVLERASLEVAKVGK+YQLLNSD
Subjt:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDGEPP----KEDFHELEGIPVVPKDPRSDNTAGAIFVLERASLEVAKVGKSYQLLNSD

Query:  DHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK-----------------------VQLLQKLSITAAGKREKLFRVIKNPVTQY
        DHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK                       +QLLQKLSITAAGKREKLFRVIKNPVTQY
Subjt:  DHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK-----------------------VQLLQKLSITAAGKREKLFRVIKNPVTQY

Query:  LPASSRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        LP++SRK+GFSHSSDKLVK+R YLD V  D DLVFV+GAMAHGKIET YTDDLLAISEYPLSASCCIADICKDLA+KWNVG
Subjt:  LPASSRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

XP_004136640.2 ribosomal RNA small subunit methyltransferase nep-1 [Cucumis sativus]1.52e-14479.42Show/hide
Query:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDGEPPKEDFHELEGIPVVPKDPRSDNTAGAIFVLERASLEVAKVGKSYQLLNSDDHSN
        MVRPFAAKGKKRKK+EKYDR E  D E   +P KK M+ENEPD EP KEDFHELEGIP+ PKDP++D+ AG IF+LERASLEVAKVGK+YQLLNSDDHSN
Subjt:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDGEPPKEDFHELEGIPVVPKDPRSDNTAGAIFVLERASLEVAKVGKSYQLLNSDDHSN

Query:  FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK-----------------------VQLLQKLSITAAGKREKLFRVIKNPVTQYLPAS
        +LRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK                       +QLLQKLSITAAGKREKLFRVIKNPVTQYLPA+
Subjt:  FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK-----------------------VQLLQKLSITAAGKREKLFRVIKNPVTQYLPAS

Query:  SRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
         RK+GFSHSSDKLVK+RNYLD V+ D DLVFV+GAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  SRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

XP_008443268.1 PREDICTED: ribosomal RNA small subunit methyltransferase NEP1 [Cucumis melo]4.14e-14981.59Show/hide
Query:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDGEPPKEDFHELEGIPVVPKDPRSDNTAGAIFVLERASLEVAKVGKSYQLLNSDDHSN
        MVRPFAAKGKKRKK EKYDR E  DGE  ++P KK MVENEPD EPPKEDFHELEGIP+VPKDP++DN AG IF+LERASLEVAKVGK+YQLLNSDDHSN
Subjt:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDGEPPKEDFHELEGIPVVPKDPRSDNTAGAIFVLERASLEVAKVGKSYQLLNSDDHSN

Query:  FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK-----------------------VQLLQKLSITAAGKREKLFRVIKNPVTQYLPAS
        +LRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK                       +QLLQKLSITAAGKREKLFRVIKNPVTQYLPA+
Subjt:  FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK-----------------------VQLLQKLSITAAGKREKLFRVIKNPVTQYLPAS

Query:  SRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
         RK+GFSHSSDKLVKMRNYLD V+ D DLVFV+GAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  SRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

XP_022147804.1 ribosomal RNA small subunit methyltransferase nep-1 [Momordica charantia]7.20e-16991.34Show/hide
Query:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDGEPPKEDFHELEGIPVVPKDPRSDNTAGAIFVLERASLEVAKVGKSYQLLNSDDHSN
        MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDGEPPKEDFHELEGIPVVPKDPRSDNTAGAIFVLERASLEVAKVGKSYQLLNSDDHSN
Subjt:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDGEPPKEDFHELEGIPVVPKDPRSDNTAGAIFVLERASLEVAKVGKSYQLLNSDDHSN

Query:  FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK-----------------------VQLLQKLSITAAGKREKLFRVIKNPVTQYLPAS
        FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK                       +QLLQKLSITAAGKREKLFRVIKNPVTQYLPAS
Subjt:  FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK-----------------------VQLLQKLSITAAGKREKLFRVIKNPVTQYLPAS

Query:  SRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        SRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  SRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

XP_038905075.1 ribosomal RNA small subunit methyltransferase nep-1 [Benincasa hispida]2.77e-14781.59Show/hide
Query:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDGEPPKEDFHELEGIPVVPKDPRSDNTAGAIFVLERASLEVAKVGKSYQLLNSDDHSN
        MVRPFAAKGKKRKK+EKYDR ++DDGES   P KKP  ENEPD EPPKEDFHELEGIP+VPKDP SD  AG IFVLERASLEVAKVGK+YQLLNSDDHSN
Subjt:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDGEPPKEDFHELEGIPVVPKDPRSDNTAGAIFVLERASLEVAKVGKSYQLLNSDDHSN

Query:  FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK-----------------------VQLLQKLSITAAGKREKLFRVIKNPVTQYLPAS
        FLR+NNRNPGDYRPDILHQALLAIFDSRIAKAGRLK VYVKTEK                       +QLLQKLSITAAGKREKLFRVIKNPVTQYLPA+
Subjt:  FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK-----------------------VQLLQKLSITAAGKREKLFRVIKNPVTQYLPAS

Query:  SRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        SRK+GFSHSSDKLVKMRNYLD V  D DLVFV+GAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWN+G
Subjt:  SRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

TrEMBL top hitse value%identityAlignment
A0A0A0LFI3 Uncharacterized protein8.46e-14775.9Show/hide
Query:  SKGFSAKASATPLFSSLLFSRTVKELPGPTMVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDGEPPKEDFHELEGIPVVPKDPRSDNTA
        SKGFS K          L SR  K L G TMVRPFAAKGKKRKK+EKYDR E  D E   +P KK M+ENEPD EP KEDFHELEGIP+ PKDP++D+ A
Subjt:  SKGFSAKASATPLFSSLLFSRTVKELPGPTMVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDGEPPKEDFHELEGIPVVPKDPRSDNTA

Query:  GAIFVLERASLEVAKVGKSYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK-----------------------VQL
        G IF+LERASLEVAKVGK+YQLLNSDDHSN+LRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK                       +QL
Subjt:  GAIFVLERASLEVAKVGKSYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK-----------------------VQL

Query:  LQKLSITAAGKREKLFRVIKNPVTQYLPASSRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDL
        LQKLSITAAGKREKLFRVIKNPVTQYLPA+ RK+GFSHSSDKLVK+RNYLD V+ D DLVFV+GAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDL
Subjt:  LQKLSITAAGKREKLFRVIKNPVTQYLPASSRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDL

Query:  AEKWNVG
        AEKWNVG
Subjt:  AEKWNVG

A0A1S3B7L0 ribosomal RNA small subunit methyltransferase NEP12.00e-14981.59Show/hide
Query:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDGEPPKEDFHELEGIPVVPKDPRSDNTAGAIFVLERASLEVAKVGKSYQLLNSDDHSN
        MVRPFAAKGKKRKK EKYDR E  DGE  ++P KK MVENEPD EPPKEDFHELEGIP+VPKDP++DN AG IF+LERASLEVAKVGK+YQLLNSDDHSN
Subjt:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDGEPPKEDFHELEGIPVVPKDPRSDNTAGAIFVLERASLEVAKVGKSYQLLNSDDHSN

Query:  FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK-----------------------VQLLQKLSITAAGKREKLFRVIKNPVTQYLPAS
        +LRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK                       +QLLQKLSITAAGKREKLFRVIKNPVTQYLPA+
Subjt:  FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK-----------------------VQLLQKLSITAAGKREKLFRVIKNPVTQYLPAS

Query:  SRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
         RK+GFSHSSDKLVKMRNYLD V+ D DLVFV+GAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  SRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

A0A5D3DPQ6 Ribosomal RNA small subunit methyltransferase NEP12.00e-14981.59Show/hide
Query:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDGEPPKEDFHELEGIPVVPKDPRSDNTAGAIFVLERASLEVAKVGKSYQLLNSDDHSN
        MVRPFAAKGKKRKK EKYDR E  DGE  ++P KK MVENEPD EPPKEDFHELEGIP+VPKDP++DN AG IF+LERASLEVAKVGK+YQLLNSDDHSN
Subjt:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDGEPPKEDFHELEGIPVVPKDPRSDNTAGAIFVLERASLEVAKVGKSYQLLNSDDHSN

Query:  FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK-----------------------VQLLQKLSITAAGKREKLFRVIKNPVTQYLPAS
        +LRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK                       +QLLQKLSITAAGKREKLFRVIKNPVTQYLPA+
Subjt:  FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK-----------------------VQLLQKLSITAAGKREKLFRVIKNPVTQYLPAS

Query:  SRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
         RK+GFSHSSDKLVKMRNYLD V+ D DLVFV+GAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  SRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

A0A6J1D237 ribosomal RNA small subunit methyltransferase nep-13.49e-16991.34Show/hide
Query:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDGEPPKEDFHELEGIPVVPKDPRSDNTAGAIFVLERASLEVAKVGKSYQLLNSDDHSN
        MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDGEPPKEDFHELEGIPVVPKDPRSDNTAGAIFVLERASLEVAKVGKSYQLLNSDDHSN
Subjt:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDGEPPKEDFHELEGIPVVPKDPRSDNTAGAIFVLERASLEVAKVGKSYQLLNSDDHSN

Query:  FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK-----------------------VQLLQKLSITAAGKREKLFRVIKNPVTQYLPAS
        FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK                       +QLLQKLSITAAGKREKLFRVIKNPVTQYLPAS
Subjt:  FLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK-----------------------VQLLQKLSITAAGKREKLFRVIKNPVTQYLPAS

Query:  SRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        SRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
Subjt:  SRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

A0A6J1J0G6 ribosomal RNA small subunit methyltransferase nep-17.65e-14178.29Show/hide
Query:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDGEPP----KEDFHELEGIPVVPKDPRSDNTAGAIFVLERASLEVAKVGKSYQLLNSD
        MVRPFAAKGKKRKKTE+YDR  +DDGE   A  KK MVENEPD +P     +E+FHELEGIP+VPKDP+SD+ AG IFVLERASLEVAKVGK+YQLLNSD
Subjt:  MVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDGEPP----KEDFHELEGIPVVPKDPRSDNTAGAIFVLERASLEVAKVGKSYQLLNSD

Query:  DHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK-----------------------VQLLQKLSITAAGKREKLFRVIKNPVTQY
        DHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK                       +QLLQKLSITAAGKREKLFRVIKNPVTQY
Subjt:  DHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK-----------------------VQLLQKLSITAAGKREKLFRVIKNPVTQY

Query:  LPASSRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
        LP++SRK+GFSHSSDKLVK+R YLD V  D DLVFV+GAMAHGKIET YTDDLLAISEYPLSASCCIADICKDLA+KWNVG
Subjt:  LPASSRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG

SwissProt top hitse value%identityAlignment
O35130 Ribosomal RNA small subunit methyltransferase NEP11.8e-3542.65Show/hide
Query:  IFVLERASLEVAKVGKSYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK-----------------------VQLLQ
        I VLE ASLE  KVGK+Y+LLN D H + L +N R+PG+ RPDI HQ+LL + DS + +AG L+ VY+ T+K                       VQLL 
Subjt:  IFVLERASLEVAKVGKSYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK-----------------------VQLLQ

Query:  KLSITAAGKREKLFRVIKNPVTQYLPASSRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAE
        KLS+ AA   +KL +VIKNPV+ + P    KIG S S + +  +R     V +   +VFV+GA AHGK+  +YT+ +++IS YPLSA+   A +     E
Subjt:  KLSITAAGKREKLFRVIKNPVTQYLPASSRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAE

Query:  KWNV
         W V
Subjt:  KWNV

Q06287 Ribosomal RNA small subunit methyltransferase NEP16.5e-3036.57Show/hide
Query:  TAGAIFVLERASLEVAKV------GKSYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK------------------
        T   I VL  ASLE  K+      G  Y LLN DDH   L++  R+  + RPDI HQ LL + DS I KAG+L+ VY++T +                  
Subjt:  TAGAIFVLERASLEVAKV------GKSYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK------------------

Query:  -----VQLLQKLSITAAGKREKLFRVIKNPVTQYLPASSRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGK--IETDYTDDLLAISEYPLSAS
             VQLL KLSI +    EKL +VIKNP+T +LP   RK+  S  +  ++++++Y++ +  D  +   +GAMA GK     +Y D+ + +S YPLSAS
Subjt:  -----VQLLQKLSITAAGKREKLFRVIKNPVTQYLPASSRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGK--IETDYTDDLLAISEYPLSAS

Query:  CCIADICKDLAEKWNV
           +  C    + WN+
Subjt:  CCIADICKDLAEKWNV

Q92979 Ribosomal RNA small subunit methyltransferase NEP16.7e-3539.75Show/hide
Query:  DGEPPK-----EDFHELEGIPVVPKDPR--SDNTAGA---IFVLERASLEVAKVGKSYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKA
        DG  P+     E   + + +P  PK PR  + N  G    I VLE ASLE  KVGK+Y+LLN D H + L +N R+PG+ RPDI HQ+LL + DS + +A
Subjt:  DGEPPK-----EDFHELEGIPVVPKDPR--SDNTAGA---IFVLERASLEVAKVGKSYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKA

Query:  GRLKVVYVKTEK-----------------------VQLLQKLSITAAGKREKLFRVIKNPVTQYLPASSRKIGFSHSSDKLVKMRNYLDDVRTDADLVFV
        G L+ VY+ T+K                       VQLL KLS+ AA   +KL +VIKNPV+ + P    K+G S S   +  +R     V +   +VFV
Subjt:  GRLKVVYVKTEK-----------------------VQLLQKLSITAAGKREKLFRVIKNPVTQYLPASSRKIGFSHSSDKLVKMRNYLDDVRTDADLVFV

Query:  LGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNV
        +GA AHGK+  +YT+ +++IS YPLSA+   A +     E W V
Subjt:  LGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNV

Q9W4J5 Ribosomal RNA small subunit methyltransferase NEP12.2e-3339.71Show/hide
Query:  IFVLERASLEVAKVGKSYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTE-----------------------KVQLLQ
        I VLE A LE  KV  +++LLN DDH+  +R+N R+PG  RPDI HQ LL +FDS + +AG L+ V+V+TE                        VQLL 
Subjt:  IFVLERASLEVAKVGKSYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTE-----------------------KVQLLQ

Query:  KLSITAAGKREKLFRVIKNPVTQYLPASSRKIGFSHSSDKLVKMRNYL-----DDVRTDADLVFVLGAMAHGKIETDYTDDLLAISEYPLSASCCIADIC
        K  I A     +L  VIKNP+T ++P   +K   S S   L   R+ +          D  +V V+GA AHG ++TDYT++L +IS YPLSA+   + IC
Subjt:  KLSITAAGKREKLFRVIKNPVTQYLPASSRKIGFSHSSDKLVKMRNYL-----DDVRTDADLVFVLGAMAHGKIETDYTDDLLAISEYPLSASCCIADIC

Query:  KDLAEKWNV
            E W V
Subjt:  KDLAEKWNV

Q9XX15 Ribosomal RNA small subunit methyltransferase nep-11.8e-3544.06Show/hide
Query:  VLERASLEVAKVGKSYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK-----------------------VQLLQKL
        VLE  SLE AKVG  Y +L+SD H+NFLR+  ++P DYRPDILHQ LL + DS + +AG+L+ V+ +T K                       VQLL KL
Subjt:  VLERASLEVAKVGKSYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK-----------------------VQLLQKL

Query:  SITAAGKREKLFRVIKNPVTQYLPASSRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKW
        SI AA   +KL  V+KNPV+ +LP  SRK+  S +  +L  M N L    TD  LV ++G +A GKI  DY D    IS YPLSA+   A +   L E W
Subjt:  SITAAGKREKLFRVIKNPVTQYLPASSRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKW

Query:  NV
         +
Subjt:  NV

Arabidopsis top hitse value%identityAlignment
AT3G57000.1 nucleolar essential protein-related6.4e-6548.99Show/hide
Query:  MVRPFAAKGKKRK-KTEKYDRSEEDDGESVAAPPKKPMVENEPDGEP-----PKEDFHELE--------------GIPVVPKDPRSDNTAGAIFVLERAS
        MVRP+  K  KRK + E+YD+ E++  E      K+   E+    +       +ED  E E              GIP+V   P  +  +G +FVLE+AS
Subjt:  MVRPFAAKGKKRK-KTEKYDRSEEDDGESVAAPPKKPMVENEPDGEP-----PKEDFHELE--------------GIPVVPKDPRSDNTAGAIFVLERAS

Query:  LEVAKVGKSYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK-----------------------VQLLQKLSITAAG
        LEVAKVGK+YQLLNSDDH+NFL++NNRNP DYRPDI HQALL I DS + KAGRLK VYV+TEK                       +QLLQKLSITA  
Subjt:  LEVAKVGKSYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEK-----------------------VQLLQKLSITAAG

Query:  KREKLFRVIKNPVTQ-YLPASSRKIGFSHSSDKLVKMRNYLDDV-RTDADLVFVLGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNV
         REKL R +KNP+ + +LP +S +IGFSHSS+KLV M+ +L  V   D D VFV+GAMAHGKI+ +Y D+ +++SEYPLSA+ CI+ IC+ LA  WN+
Subjt:  KREKLFRVIKNPVTQ-YLPASSRKIGFSHSSDKLVKMRNYLDDV-RTDADLVFVLGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCCCAATCAGAAAAATTTTACAGCCAAGCCAAAGCCCAGCCCAGGCCCAGAGGCGTAAACCCAGACCCAGGGCTTTGTGGTCGCTCGTCGAGGCAGCCATTTCAGCTTTC
CAAGGGTTTCAGCGCCAAGGCGTCGGCTACACCGCTCTTCTCTTCTCTTCTCTTCTCGCGTACTGTGAAGGAACTTCCAGGCCCAACCATGGTTCGTCCATTTGCGGCCA
AGGGGAAGAAGAGGAAAAAGACGGAGAAATACGACAGAAGTGAGGAGGACGACGGAGAATCCGTCGCAGCGCCGCCCAAGAAGCCTATGGTGGAGAATGAACCCGATGGA
GAACCACCCAAAGAAGATTTCCATGAGCTTGAAGGTATTCCAGTCGTTCCAAAAGACCCCAGAAGTGACAACACTGCTGGTGCTATCTTCGTCCTCGAGAGAGCTTCTCT
GGAGGTCGCCAAAGTTGGGAAGAGTTACCAGCTGTTGAATTCCGATGACCACTCCAATTTTTTGCGGAGAAATAACAGAAATCCGGGGGATTACAGACCCGATATCCTGC
ATCAAGCTCTCTTGGCGATTTTCGATAGCCGCATTGCAAAGGCTGGGAGGTTGAAAGTTGTTTATGTGAAAACTGAGAAAGTGCAATTGCTACAGAAGTTGAGCATCACA
GCTGCGGGTAAGCGCGAGAAACTTTTTCGGGTGATAAAGAACCCCGTAACTCAGTATTTACCTGCCAGTTCTCGTAAAATCGGCTTCTCACATAGTTCAGACAAGTTGGT
CAAGATGCGAAATTATCTGGATGATGTCAGAACTGATGCAGACCTTGTTTTTGTGTTGGGTGCAATGGCTCATGGGAAAATTGAGACAGATTACACGGATGATCTTTTAG
CAATTTCTGAATATCCTCTCAGTGCTAGTTGCTGTATTGCGGATATTTGCAAAGATTTGGCAGAGAAATGGAATGTAGGGTGA
mRNA sequenceShow/hide mRNA sequence
TGCCCAATCAGAAAAATTTTACAGCCAAGCCAAAGCCCAGCCCAGGCCCAGAGGCGTAAACCCAGACCCAGGGCTTTGTGGTCGCTCGTCGAGGCAGCCATTTCAGCTTT
CCAAGGGTTTCAGCGCCAAGGCGTCGGCTACACCGCTCTTCTCTTCTCTTCTCTTCTCGCGTACTGTGAAGGAACTTCCAGGCCCAACCATGGTTCGTCCATTTGCGGCC
AAGGGGAAGAAGAGGAAAAAGACGGAGAAATACGACAGAAGTGAGGAGGACGACGGAGAATCCGTCGCAGCGCCGCCCAAGAAGCCTATGGTGGAGAATGAACCCGATGG
AGAACCACCCAAAGAAGATTTCCATGAGCTTGAAGGTATTCCAGTCGTTCCAAAAGACCCCAGAAGTGACAACACTGCTGGTGCTATCTTCGTCCTCGAGAGAGCTTCTC
TGGAGGTCGCCAAAGTTGGGAAGAGTTACCAGCTGTTGAATTCCGATGACCACTCCAATTTTTTGCGGAGAAATAACAGAAATCCGGGGGATTACAGACCCGATATCCTG
CATCAAGCTCTCTTGGCGATTTTCGATAGCCGCATTGCAAAGGCTGGGAGGTTGAAAGTTGTTTATGTGAAAACTGAGAAAGTGCAATTGCTACAGAAGTTGAGCATCAC
AGCTGCGGGTAAGCGCGAGAAACTTTTTCGGGTGATAAAGAACCCCGTAACTCAGTATTTACCTGCCAGTTCTCGTAAAATCGGCTTCTCACATAGTTCAGACAAGTTGG
TCAAGATGCGAAATTATCTGGATGATGTCAGAACTGATGCAGACCTTGTTTTTGTGTTGGGTGCAATGGCTCATGGGAAAATTGAGACAGATTACACGGATGATCTTTTA
GCAATTTCTGAATATCCTCTCAGTGCTAGTTGCTGTATTGCGGATATTTGCAAAGATTTGGCAGAGAAATGGAATGTAGGGTGAACCATGCTGACAGCCCTGCATCCAGT
TAAGTTTGAATATCAGTACCTCTACCATCTTGTTTCATATGTTTTAATTATTATTTCATGAAATATGCCTTAAGATTCTTTAGGTGTTTCTTGGAACCATAATATAGGAA
TGCATTTTTTTTTCTGCTCAAGAGATATGAGTTGTAGAGACGAATTAAGCCTTACCATAGCTATTTAATGTGTAGCCAATGATTAATGCTTTAAATTTCATTGAAAGCGA
TAGACACTCTTTCCCGTTAAGGGCCCGTTTTGCGACGTTCTTGTTTTTTGTTTCTAATTTTATTA
Protein sequenceShow/hide protein sequence
AQSEKFYSQAKAQPRPRGVNPDPGLCGRSSRQPFQLSKGFSAKASATPLFSSLLFSRTVKELPGPTMVRPFAAKGKKRKKTEKYDRSEEDDGESVAAPPKKPMVENEPDG
EPPKEDFHELEGIPVVPKDPRSDNTAGAIFVLERASLEVAKVGKSYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKVQLLQKLSIT
AAGKREKLFRVIKNPVTQYLPASSRKIGFSHSSDKLVKMRNYLDDVRTDADLVFVLGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG