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MC00g0177 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC00g0177
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionZf-CCHC domain-containing protein
Genome locationscaffold18:334820..335015
RNA-Seq ExpressionMC00g0177
SyntenyMC00g0177
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0005488 - binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054760.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.32e-1149.23Show/hide
Query:  PKEELSPIKKYAIIRTKCTVNQKV-SEVIDSGNNEDNVSCKLVKQLKLTCVPHPFPYTVSWTKKG
        PKEE +P +++++ +T+CT+N KV  E+IDSG++E+ V+ KLV  L L   PHP PY + W KKG
Subjt:  PKEELSPIKKYAIIRTKCTVNQKV-SEVIDSGNNEDNVSCKLVKQLKLTCVPHPFPYTVSWTKKG

KAA0063032.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]3.64e-1047.69Show/hide
Query:  PKEELSPIKKYAIIRTKCTVNQKVSEVI-DSGNNEDNVSCKLVKQLKLTCVPHPFPYTVSWTKKG
        PKEE +P +++++ +T+CT+N KV +VI +SG++E+ V+ KLV  L L   PHP PY + W KKG
Subjt:  PKEELSPIKKYAIIRTKCTVNQKVSEVI-DSGNNEDNVSCKLVKQLKLTCVPHPFPYTVSWTKKG

XP_015865611.1 uncharacterized protein LOC107403258 [Ziziphus jujuba]9.02e-1253.85Show/hide
Query:  PKEELSPIKKYAIIRTKCTVNQKVSEVI-DSGNNEDNVSCKLVKQLKLTCVPHPFPYTVSWTKKG
        PK  + P ++++I +TKCT+N+KV EVI DSG++E+ VS  LVK LKL  + HP PY V W KKG
Subjt:  PKEELSPIKKYAIIRTKCTVNQKVSEVI-DSGNNEDNVSCKLVKQLKLTCVPHPFPYTVSWTKKG

XP_024932991.1 uncharacterized protein LOC112492819 [Ziziphus jujuba]4.40e-1155.17Show/hide
Query:  IKKYAIIRTKCTVNQKVSEVI-DSGNNEDNVSCKLVKQLKLTCVPHPFPYTVSWTKKG
        +++++I +TKCT+N+KV EVI DSG++E+ VS  LVK LKL  + HP PY V W KKG
Subjt:  IKKYAIIRTKCTVNQKVSEVI-DSGNNEDNVSCKLVKQLKLTCVPHPFPYTVSWTKKG

XP_024933220.1 uncharacterized protein LOC112492864 [Ziziphus jujuba]9.16e-1253.85Show/hide
Query:  PKEELSPIKKYAIIRTKCTVNQKVSEVI-DSGNNEDNVSCKLVKQLKLTCVPHPFPYTVSWTKKG
        PK  + P ++++I +TKCT+N+KV EVI DSG++E+ VS  LVK LKL  + HP PY V W KKG
Subjt:  PKEELSPIKKYAIIRTKCTVNQKVSEVI-DSGNNEDNVSCKLVKQLKLTCVPHPFPYTVSWTKKG

TrEMBL top hitse value%identityAlignment
A0A5A7UHK1 DNA/RNA polymerases superfamily protein1.12e-1149.23Show/hide
Query:  PKEELSPIKKYAIIRTKCTVNQKV-SEVIDSGNNEDNVSCKLVKQLKLTCVPHPFPYTVSWTKKG
        PKEE +P +++++ +T+CT+N KV  E+IDSG++E+ V+ KLV  L L   PHP PY + W KKG
Subjt:  PKEELSPIKKYAIIRTKCTVNQKV-SEVIDSGNNEDNVSCKLVKQLKLTCVPHPFPYTVSWTKKG

A0A5B7BER3 Uncharacterized protein1.56e-1152.31Show/hide
Query:  PKEELSPIKKYAIIRTKCTVNQKVSEVI-DSGNNEDNVSCKLVKQLKLTCVPHPFPYTVSWTKKG
        PK+E+ P +++ I RT+CT+NQKV +VI DSG++E+ VS  LVK L+L    HP PY + W KKG
Subjt:  PKEELSPIKKYAIIRTKCTVNQKVSEVI-DSGNNEDNVSCKLVKQLKLTCVPHPFPYTVSWTKKG

A0A6P3YU03 uncharacterized protein LOC1074032584.37e-1253.85Show/hide
Query:  PKEELSPIKKYAIIRTKCTVNQKVSEVI-DSGNNEDNVSCKLVKQLKLTCVPHPFPYTVSWTKKG
        PK  + P ++++I +TKCT+N+KV EVI DSG++E+ VS  LVK LKL  + HP PY V W KKG
Subjt:  PKEELSPIKKYAIIRTKCTVNQKVSEVI-DSGNNEDNVSCKLVKQLKLTCVPHPFPYTVSWTKKG

A0A6P6GFU0 uncharacterized protein LOC1124928192.13e-1155.17Show/hide
Query:  IKKYAIIRTKCTVNQKVSEVI-DSGNNEDNVSCKLVKQLKLTCVPHPFPYTVSWTKKG
        +++++I +TKCT+N+KV EVI DSG++E+ VS  LVK LKL  + HP PY V W KKG
Subjt:  IKKYAIIRTKCTVNQKVSEVI-DSGNNEDNVSCKLVKQLKLTCVPHPFPYTVSWTKKG

A0A6P6GHI6 uncharacterized protein LOC1124928644.43e-1253.85Show/hide
Query:  PKEELSPIKKYAIIRTKCTVNQKVSEVI-DSGNNEDNVSCKLVKQLKLTCVPHPFPYTVSWTKKG
        PK  + P ++++I +TKCT+N+KV EVI DSG++E+ VS  LVK LKL  + HP PY V W KKG
Subjt:  PKEELSPIKKYAIIRTKCTVNQKVSEVI-DSGNNEDNVSCKLVKQLKLTCVPHPFPYTVSWTKKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCTAAAGAAGAACTATCTCCAATCAAAAAGTATGCTATTATTAGGACAAAATGTACGGTCAATCAAAAAGTTTCTGAAGTGATAGATAGTGGCAATAATGAGGATAATGT
TTCCTGCAAACTGGTAAAGCAACTTAAACTAACCTGTGTGCCACACCCTTTTCCCTACACGGTCTCCTGGACCAAGAAGGGA
mRNA sequenceShow/hide mRNA sequence
CCTAAAGAAGAACTATCTCCAATCAAAAAGTATGCTATTATTAGGACAAAATGTACGGTCAATCAAAAAGTTTCTGAAGTGATAGATAGTGGCAATAATGAGGATAATGT
TTCCTGCAAACTGGTAAAGCAACTTAAACTAACCTGTGTGCCACACCCTTTTCCCTACACGGTCTCCTGGACCAAGAAGGGA
Protein sequenceShow/hide protein sequence
PKEELSPIKKYAIIRTKCTVNQKVSEVIDSGNNEDNVSCKLVKQLKLTCVPHPFPYTVSWTKKG