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MC00g0182 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC00g0182
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRetrotransposon protein
Genome locationscaffold18:573678..573796
RNA-Seq ExpressionMC00g0182
SyntenyMC00g0182
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033884.1 retrotransposon protein [Cucumis melo var. makuwa]1.54e-0650.94Show/hide
Query:  MNYSFVRNVIERVFDFLK-RWTILQGKSFYPI-------------HNIVNREM
        M +S VRNVIER FD LK RW IL+GKS+YP+             HN++N+EM
Subjt:  MNYSFVRNVIERVFDFLK-RWTILQGKSFYPI-------------HNIVNREM
KAA0051057.1 retrotransposon protein [Cucumis melo var. makuwa]1.13e-0650.94Show/hide
Query:  MNYSFVRNVIERVFDFLK-RWTILQGKSFYPI-------------HNIVNREM
        M +SF RNVIER F  LK RW IL+GKS+YP+             HN++NREM
Subjt:  MNYSFVRNVIERVFDFLK-RWTILQGKSFYPI-------------HNIVNREM
TYK03076.1 retrotransposon protein [Cucumis melo var. makuwa]1.49e-0650.94Show/hide
Query:  MNYSFVRNVIERVFDFLK-RWTILQGKSFYPI-------------HNIVNREM
        M +S VRNVIERVF  LK  W IL+GKS+YP+             HN++NREM
Subjt:  MNYSFVRNVIERVFDFLK-RWTILQGKSFYPI-------------HNIVNREM
TYK03086.1 retrotransposon protein [Cucumis melo var. makuwa]1.26e-0754.72Show/hide
Query:  MNYSFVRNVIERVFDFLK-RWTILQGKSFYPI-------------HNIVNREM
        M++S VRNVIER FD LK RWTIL GKS+YP+             HN++NREM
Subjt:  MNYSFVRNVIERVFDFLK-RWTILQGKSFYPI-------------HNIVNREM
TYK16366.1 retrotransposon protein [Cucumis melo var. makuwa]2.00e-0650.94Show/hide
Query:  MNYSFVRNVIERVFDFLK-RWTILQGKSFYPI-------------HNIVNREM
        M YS  RNVIER F  LK RW IL+GKS+YP+             HN++NREM
Subjt:  MNYSFVRNVIERVFDFLK-RWTILQGKSFYPI-------------HNIVNREM
TrEMBL top hitse value%identityAlignment
A0A5A7U9H2 Retrotransposon protein5.45e-0750.94Show/hide
Query:  MNYSFVRNVIERVFDFLK-RWTILQGKSFYPI-------------HNIVNREM
        M +SF RNVIER F  LK RW IL+GKS+YP+             HN++NREM
Subjt:  MNYSFVRNVIERVFDFLK-RWTILQGKSFYPI-------------HNIVNREM
A0A5D3BQI7 Retrotransposon protein7.44e-0750.94Show/hide
Query:  MNYSFVRNVIERVFDFLK-RWTILQGKSFYPI-------------HNIVNREM
        M +S VRNVIER FD LK RW IL+GKS+YP+             HN++N+EM
Subjt:  MNYSFVRNVIERVFDFLK-RWTILQGKSFYPI-------------HNIVNREM
A0A5D3BY13 Retrotransposon protein7.21e-0750.94Show/hide
Query:  MNYSFVRNVIERVFDFLK-RWTILQGKSFYPI-------------HNIVNREM
        M +S VRNVIERVF  LK  W IL+GKS+YP+             HN++NREM
Subjt:  MNYSFVRNVIERVFDFLK-RWTILQGKSFYPI-------------HNIVNREM
A0A5D3BY22 Retrotransposon protein6.09e-0854.72Show/hide
Query:  MNYSFVRNVIERVFDFLK-RWTILQGKSFYPI-------------HNIVNREM
        M++S VRNVIER FD LK RWTIL GKS+YP+             HN++NREM
Subjt:  MNYSFVRNVIERVFDFLK-RWTILQGKSFYPI-------------HNIVNREM
A0A5D3D121 Retrotransposon protein9.67e-0750.94Show/hide
Query:  MNYSFVRNVIERVFDFLK-RWTILQGKSFYPI-------------HNIVNREM
        M YS  RNVIER F  LK RW IL+GKS+YP+             HN++NREM
Subjt:  MNYSFVRNVIERVFDFLK-RWTILQGKSFYPI-------------HNIVNREM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTATTCTTTTGTAAGGAATGTTATTGAGAGGGTATTCGATTTCCTTAAGAGATGGACAATTCTTCAAGGCAAATCCTTCTATCCAATTCACAACATTGTTAATAG
AGAGATG
mRNA sequenceShow/hide mRNA sequence
ATGAATTATTCTTTTGTAAGGAATGTTATTGAGAGGGTATTCGATTTCCTTAAGAGATGGACAATTCTTCAAGGCAAATCCTTCTATCCAATTCACAACATTGTTAATAG
AGAGATG
Protein sequenceShow/hide protein sequence
MNYSFVRNVIERVFDFLKRWTILQGKSFYPIHNIVNREM