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MC00g0184 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC00g0184
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationscaffold18:645837..646046
RNA-Seq ExpressionMC00g0184
SyntenyMC00g0184
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN71468.1 hypothetical protein VITISV_038992 [Vitis vinifera]1.06e-0840.62Show/hide
Query:  YHSPYPPYLETVPYPPGYQIPPFSVFDGRGCPKRHLSHFITACRDTTTKWVFAIKTISPFLRRS
        Y   YP Y++ VP+PP YQ P FS FDG G P  H++HF++ C DT       ++     LR++
Subjt:  YHSPYPPYLETVPYPPGYQIPPFSVFDGRGCPKRHLSHFITACRDTTTKWVFAIKTISPFLRRS

PWZ41188.1 hypothetical protein Zm00014a_005380 [Zea mays]3.53e-0748.94Show/hide
Query:  YHSPYPPYLETVPYPPGYQIPPFSVFDGRGCPKRHLSHFITACRDTT
        Y  PYPP ++ VP+P  Y+ P FS F+G G P  H++HF+ AC+DT+
Subjt:  YHSPYPPYLETVPYPPGYQIPPFSVFDGRGCPKRHLSHFITACRDTT

TVU51241.1 hypothetical protein EJB05_02652, partial [Eragrostis curvula]1.02e-0748.94Show/hide
Query:  YHSPYPPYLETVPYPPGYQIPPFSVFDGRGCPKRHLSHFITACRDTT
        Y  PYPP ++ VP+P  Y+ P FS F+G G P  H++HF+ AC+DT+
Subjt:  YHSPYPPYLETVPYPPGYQIPPFSVFDGRGCPKRHLSHFITACRDTT

XP_020181131.1 uncharacterized protein LOC109766757 [Aegilops tauschii subsp. strangulata]5.21e-0843.64Show/hide
Query:  YHSPYPPYLETVPYPPGYQIPPFSVFDGRGCPKRHLSHFITACRDTTTKWVFAIK
        Y  PYPPY++ VP+P  Y+ P FS F+G G P  H++HF  AC+DT       ++
Subjt:  YHSPYPPYLETVPYPPGYQIPPFSVFDGRGCPKRHLSHFITACRDTTTKWVFAIK

XP_024311258.1 uncharacterized protein LOC112269245 [Brachypodium distachyon]3.51e-0750Show/hide
Query:  YHSPYPPYLETVPYPPGYQIPPFSVFDGRGCPKRHLSHFITACRDT
        Y  PYPP ++ VP+P  Y+ P FS F+G G P  H++HF+ AC+DT
Subjt:  YHSPYPPYLETVPYPPGYQIPPFSVFDGRGCPKRHLSHFITACRDT

TrEMBL top hitse value%identityAlignment
A0A3L6G245 Uncharacterized protein1.71e-0748.94Show/hide
Query:  YHSPYPPYLETVPYPPGYQIPPFSVFDGRGCPKRHLSHFITACRDTT
        Y  PYPP ++ VP+P  Y+ P FS F+G G P  H++HF+ AC+DT+
Subjt:  YHSPYPPYLETVPYPPGYQIPPFSVFDGRGCPKRHLSHFITACRDTT

A0A5J9WT05 Retrotrans_gag domain-containing protein (Fragment)4.94e-0848.94Show/hide
Query:  YHSPYPPYLETVPYPPGYQIPPFSVFDGRGCPKRHLSHFITACRDTT
        Y  PYPP ++ VP+P  Y+ P FS F+G G P  H++HF+ AC+DT+
Subjt:  YHSPYPPYLETVPYPPGYQIPPFSVFDGRGCPKRHLSHFITACRDTT

A0A6V7NHB6 Retrotrans_gag domain-containing protein3.10e-0752.17Show/hide
Query:  SPYPPYLETVPYPPGYQIPPFSVFDGRGCPKRHLSHFITACRDTTT
         PY  + + VP+PPGY  P F +FDG G P+ HL+HF  AC DT T
Subjt:  SPYPPYLETVPYPPGYQIPPFSVFDGRGCPKRHLSHFITACRDTTT

A5AMW3 Retrotrans_gag domain-containing protein5.15e-0940.62Show/hide
Query:  YHSPYPPYLETVPYPPGYQIPPFSVFDGRGCPKRHLSHFITACRDTTTKWVFAIKTISPFLRRS
        Y   YP Y++ VP+PP YQ P FS FDG G P  H++HF++ C DT       ++     LR++
Subjt:  YHSPYPPYLETVPYPPGYQIPPFSVFDGRGCPKRHLSHFITACRDTTTKWVFAIKTISPFLRRS

B8B202 Retrotrans_gag domain-containing protein1.74e-0741.67Show/hide
Query:  TIQP-YHSPYPPYLETVPYPPGYQIPPFSVFDGRGCPKRHLSHFITACRDTTTKWVFAIK
        T++P Y  PYPP ++ VP+P  Y+ P FS F+G G P  H++HF+ AC+DT       ++
Subjt:  TIQP-YHSPYPPYLETVPYPPGYQIPPFSVFDGRGCPKRHLSHFITACRDTTTKWVFAIK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACAATCCAGCCTTATCACAGTCCATATCCTCCATATCTTGAAACCGTTCCTTATCCACCAGGATACCAAATCCCACCATTTTCAGTGTTTGATGGGAGAGGTTGCCCTAA
AAGACACTTATCTCATTTTATTACCGCTTGCCGGGACACTACCACAAAATGGGTCTTTGCCATTAAGACAATTTCCCCTTTCCTTCGACGGTCCTGCCTA
mRNA sequenceShow/hide mRNA sequence
ACAATCCAGCCTTATCACAGTCCATATCCTCCATATCTTGAAACCGTTCCTTATCCACCAGGATACCAAATCCCACCATTTTCAGTGTTTGATGGGAGAGGTTGCCCTAA
AAGACACTTATCTCATTTTATTACCGCTTGCCGGGACACTACCACAAAATGGGTCTTTGCCATTAAGACAATTTCCCCTTTCCTTCGACGGTCCTGCCTA
Protein sequenceShow/hide protein sequence
TIQPYHSPYPPYLETVPYPPGYQIPPFSVFDGRGCPKRHLSHFITACRDTTTKWVFAIKTISPFLRRSCL