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MC00g0185 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC00g0185
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRibosomal protein S10
Genome locationscaffold18:649328..649621
RNA-Seq ExpressionMC00g0185
SyntenyMC00g0185
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001848 - Ribosomal protein S10
IPR027486 - Ribosomal protein S10 domain
IPR036838 - Ribosomal protein S10 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD25546.1 TPA_asm: hypothetical protein HUJ06_027010 [Nelumbo nucifera]4.15e-5488.78Show/hide
Query:  NQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYIRKIGLPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVIKTERHELHKKFFRLKRRATRRT
        +QKE PPKVTTTKIRIVIRSFDHPF ENHFWGLPPY RKIGLP+SRV Y VLRSP IDKK REQFEMEIKKQFLVIKTE HEL KKFFRLKRRATRRT
Subjt:  NQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYIRKIGLPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVIKTERHELHKKFFRLKRRATRRT

KAF4348321.1 hypothetical protein F8388_018561 [Cannabis sativa]1.63e-5389.8Show/hide
Query:  NQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYIRKIGLPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVIKTERHELHKKFFRLKRRATRRT
        +QKERPPKVTTTKIRIVIRSFDHPFFENHF GLPPY RKIGLP+SRV Y VLRSP IDKK REQFEMEIKKQFLVIKTERHEL KKFFRLKRRAT RT
Subjt:  NQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYIRKIGLPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVIKTERHELHKKFFRLKRRATRRT

KYP31509.1 hypothetical protein KK1_048135 [Cajanus cajan]1.19e-5387.76Show/hide
Query:  NQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYIRKIGLPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVIKTERHELHKKFFRLKRRATRRT
        +QKERPPKVTTTKIRIVIRSFDHPFFENHF GLPPY RKIGLP+SRV Y VLRSP IDKK REQFEMEIKK+FL+IKTE+HEL KKFFRLKRRATRRT
Subjt:  NQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYIRKIGLPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVIKTERHELHKKFFRLKRRATRRT

QVJ97849.1 hypothetical protein [Apium graveolens]1.45e-5489.8Show/hide
Query:  NQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYIRKIGLPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVIKTERHELHKKFFRLKRRATRRT
        +QKERPPKVTTTKIRIVIRSFDHPFFEN FWGLPPY RKIGLP+SRV Y VLRSP IDKK REQFEMEIKKQFLVIK ERHEL KKFFRLKRRATRRT
Subjt:  NQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYIRKIGLPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVIKTERHELHKKFFRLKRRATRRT

YP_008999584.1 ribosomal protein S10 [Vaccinium macrocarpon]3.41e-5387.76Show/hide
Query:  NQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYIRKIGLPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVIKTERHELHKKFFRLKRRATRRT
        +QKERPPKVTTTKIRIVIRSFDHPFFENH WGLPPY RKIGLP+SRV Y VLRSP IDKK REQFEMEIKK+FLVIKTE HEL KK FRLKRRATRRT
Subjt:  NQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYIRKIGLPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVIKTERHELHKKFFRLKRRATRRT

TrEMBL top hitse value%identityAlignment
A0A151UHR2 Ribosomal_S10 domain-containing protein5.77e-5487.76Show/hide
Query:  NQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYIRKIGLPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVIKTERHELHKKFFRLKRRATRRT
        +QKERPPKVTTTKIRIVIRSFDHPFFENHF GLPPY RKIGLP+SRV Y VLRSP IDKK REQFEMEIKK+FL+IKTE+HEL KKFFRLKRRATRRT
Subjt:  NQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYIRKIGLPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVIKTERHELHKKFFRLKRRATRRT

A0A5C2FRB4 Ribosomal protein S101.28e-5288.78Show/hide
Query:  NQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYIRKIGLPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVIKTERHELHKKFFRLKRRATRRT
        +QKERPPKVTTTKIRIVIRSFDHPFFEN  WGLPPY RKIGLP+SRV Y VLRSP IDKK REQFEMEIKK+FLVIKTERHEL KKFFRLKRRATRRT
Subjt:  NQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYIRKIGLPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVIKTERHELHKKFFRLKRRATRRT

A0A7J6DQE3 Ribosomal_S10 domain-containing protein7.90e-5489.8Show/hide
Query:  NQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYIRKIGLPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVIKTERHELHKKFFRLKRRATRRT
        +QKERPPKVTTTKIRIVIRSFDHPFFENHF GLPPY RKIGLP+SRV Y VLRSP IDKK REQFEMEIKKQFLVIKTERHEL KKFFRLKRRAT RT
Subjt:  NQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYIRKIGLPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVIKTERHELHKKFFRLKRRATRRT

A0A7J6G9N2 Ribosomal_S10 domain-containing protein7.55e-5388.78Show/hide
Query:  NQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYIRKIGLPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVIKTERHELHKKFFRLKRRATRRT
        +QK+RPPKVTTTKIRIVIRSFDHPFFENHF GLPPY RKIGLP+SRV Y VLRSP IDKK REQFEMEIKKQFLVIKTERHEL KKFFRLKRRAT RT
Subjt:  NQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYIRKIGLPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVIKTERHELHKKFFRLKRRATRRT

V9PBK4 Ribosomal protein S101.65e-5387.76Show/hide
Query:  NQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYIRKIGLPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVIKTERHELHKKFFRLKRRATRRT
        +QKERPPKVTTTKIRIVIRSFDHPFFENH WGLPPY RKIGLP+SRV Y VLRSP IDKK REQFEMEIKK+FLVIKTE HEL KK FRLKRRATRRT
Subjt:  NQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYIRKIGLPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVIKTERHELHKKFFRLKRRATRRT

SwissProt top hitse value%identityAlignment
A0LII9 30S ribosomal protein S101.4e-0434.21Show/hide
Query:  VTTTKIRIVIRSFDHPFFENHFWGLPPYIRKIG--------LPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVI
        +T  +IRI ++++DH   +     +    +K G        LP     Y VLRSP +DKK REQFE+ + K+ + I
Subjt:  VTTTKIRIVIRSFDHPFFENHFWGLPPYIRKIG--------LPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVI

P26869 Ribosomal protein S10, mitochondrial9.9e-1459.26Show/hide
Query:  TTKIRIVIRSFDHPFFENHFWGLPPYIRKIGLPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVIKTERHELHKKFFRLK
        T KI IVI+S     FEN   GL    RKIGLPK +  Y VLRSP IDKK REQFEM I KQ LVI+TE H+L +K   LK
Subjt:  TTKIRIVIRSFDHPFFENHFWGLPPYIRKIGLPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVIKTERHELHKKFFRLK

P42797 40S ribosomal protein S10, mitochondrial3.5e-1956.67Show/hide
Query:  KERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYIRKIGLPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVIKTERHELHKKFFRLKR
        +E   K+  TKI I IRSF +P  E   W LPP+ RK+ +P +R  Y VLRSP +DKK REQFEM  KK+FLVIK + HEL KK F LKR
Subjt:  KERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYIRKIGLPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVIKTERHELHKKFFRLKR

P51428 Ribosomal protein S10, mitochondrial5.2e-3181.93Show/hide
Query:  TTKIRIVIRSFDHPFFENHFWGLPPYIRKIGLPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVIKTERHELHKKFFRLKRR
        TTKIRIVIRSFDHPF ENHF GLPPY  KIGLP+SRV Y VLRSP IDKK REQFEMEIKK++LVIKTE+HEL KKFF LKR+
Subjt:  TTKIRIVIRSFDHPFFENHFWGLPPYIRKIGLPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVIKTERHELHKKFFRLKRR

Q6AP72 30S ribosomal protein S101.9e-0435.53Show/hide
Query:  VTTTKIRIVIRSFDHPFFENHFWGLPPYIRKIG--------LPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVI
        + T KIRI ++++DH   +     +    R+ G        LP S   + VLRSP ++KK REQFEM   ++ L I
Subjt:  VTTTKIRIVIRSFDHPFFENHFWGLPPYIRKIG--------LPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVI

Arabidopsis top hitse value%identityAlignment
AT3G22300.1 ribosomal protein S102.5e-2056.67Show/hide
Query:  KERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYIRKIGLPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVIKTERHELHKKFFRLKR
        +E   K+  TKI I IRSF +P  E   W LPP+ RK+ +P +R  Y VLRSP +DKK REQFEM  KK+FLVIK + HEL KK F LKR
Subjt:  KERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYIRKIGLPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVIKTERHELHKKFFRLKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACCAAAAGGAAAGACCACCAAAAGTCACGACCACCAAGATACGTATAGTGATTCGATCTTTTGATCACCCATTTTTTGAAAACCATTTTTGGGGGCTTCCGCCTTACAT
ACGGAAGATTGGATTGCCTAAATCACGAGTCAACTATATTGTGTTACGATCACCTGATATTGATAAAAAGTTCAGAGAACAATTTGAAATGGAAATCAAGAAACAATTTC
TGGTCATAAAAACAGAAAGGCATGAATTGCACAAGAAGTTCTTTCGATTAAAACGTCGTGCGACTCGGAGGACA
mRNA sequenceShow/hide mRNA sequence
AACCAAAAGGAAAGACCACCAAAAGTCACGACCACCAAGATACGTATAGTGATTCGATCTTTTGATCACCCATTTTTTGAAAACCATTTTTGGGGGCTTCCGCCTTACAT
ACGGAAGATTGGATTGCCTAAATCACGAGTCAACTATATTGTGTTACGATCACCTGATATTGATAAAAAGTTCAGAGAACAATTTGAAATGGAAATCAAGAAACAATTTC
TGGTCATAAAAACAGAAAGGCATGAATTGCACAAGAAGTTCTTTCGATTAAAACGTCGTGCGACTCGGAGGACA
Protein sequenceShow/hide protein sequence
NQKERPPKVTTTKIRIVIRSFDHPFFENHFWGLPPYIRKIGLPKSRVNYIVLRSPDIDKKFREQFEMEIKKQFLVIKTERHELHKKFFRLKRRATRRT