; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC00g0202 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC00g0202
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionProtein LHCP TRANSLOCATION DEFECT
Genome locationscaffold18:1084426..1084566
RNA-Seq ExpressionMC00g0202
SyntenyMC00g0202
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0090391 - granum assembly (biological process)
GO:0009570 - chloroplast stroma (cellular component)
GO:0009941 - chloroplast envelope (cellular component)
InterPro domainsIPR044242 - Protein LHCP TRANSLOCATION DEFECT-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152919.1 protein LHCP TRANSLOCATION DEFECT [Cucumis sativus]4.25e-1164.81Show/hide
Query:  FNYMGMLAVEGTYEEMEALLSQDIHPVYSFLT-------NQNLKELLRAGANSD
        FNYMGMLAVEGTY++MEALLSQDIHPV   L           L+ELLRAGA+ D
Subjt:  FNYMGMLAVEGTYEEMEALLSQDIHPVYSFLT-------NQNLKELLRAGANSD
XP_008463435.1 PREDICTED: protein LHCP TRANSLOCATION DEFECT [Cucumis melo]4.25e-1164.81Show/hide
Query:  FNYMGMLAVEGTYEEMEALLSQDIHPVYSFLT-------NQNLKELLRAGANSD
        FNYMGMLAVEGTY++MEALLSQDIHPV   L           L+ELLRAGA+ D
Subjt:  FNYMGMLAVEGTYEEMEALLSQDIHPVYSFLT-------NQNLKELLRAGANSD
XP_022150983.1 protein LHCP TRANSLOCATION DEFECT [Momordica charantia]5.99e-1164.81Show/hide
Query:  FNYMGMLAVEGTYEEMEALLSQDIHPVYSFLT-------NQNLKELLRAGANSD
        FNYMGMLAVEGTY++MEALLSQDIHPV   L           L+ELLRAGA  D
Subjt:  FNYMGMLAVEGTYEEMEALLSQDIHPVYSFLT-------NQNLKELLRAGANSD
XP_022985270.1 protein LHCP TRANSLOCATION DEFECT [Cucurbita maxima]6.10e-1164.81Show/hide
Query:  FNYMGMLAVEGTYEEMEALLSQDIHPVYSFLT-------NQNLKELLRAGANSD
        FNYMGMLAVEGTY++MEALLSQDIHPV   L           L+ELLRAGA  D
Subjt:  FNYMGMLAVEGTYEEMEALLSQDIHPVYSFLT-------NQNLKELLRAGANSD
XP_038903413.1 protein LHCP TRANSLOCATION DEFECT [Benincasa hispida]7.65e-1266.67Show/hide
Query:  FNYMGMLAVEGTYEEMEALLSQDIHPVYSFLT-------NQNLKELLRAGANSD
        FNYMGMLAVEGTY++MEALLSQDIHPV   L           L+ELLRAGAN D
Subjt:  FNYMGMLAVEGTYEEMEALLSQDIHPVYSFLT-------NQNLKELLRAGANSD
TrEMBL top hitse value%identityAlignment
A0A0A0L309 ANK_REP_REGION domain-containing protein2.06e-1164.81Show/hide
Query:  FNYMGMLAVEGTYEEMEALLSQDIHPVYSFLT-------NQNLKELLRAGANSD
        FNYMGMLAVEGTY++MEALLSQDIHPV   L           L+ELLRAGA+ D
Subjt:  FNYMGMLAVEGTYEEMEALLSQDIHPVYSFLT-------NQNLKELLRAGANSD
A0A1S3CJ75 protein LHCP TRANSLOCATION DEFECT2.06e-1164.81Show/hide
Query:  FNYMGMLAVEGTYEEMEALLSQDIHPVYSFLT-------NQNLKELLRAGANSD
        FNYMGMLAVEGTY++MEALLSQDIHPV   L           L+ELLRAGA+ D
Subjt:  FNYMGMLAVEGTYEEMEALLSQDIHPVYSFLT-------NQNLKELLRAGANSD
A0A5D3BT07 Protein LHCP TRANSLOCATION DEFECT2.06e-1164.81Show/hide
Query:  FNYMGMLAVEGTYEEMEALLSQDIHPVYSFLT-------NQNLKELLRAGANSD
        FNYMGMLAVEGTY++MEALLSQDIHPV   L           L+ELLRAGA+ D
Subjt:  FNYMGMLAVEGTYEEMEALLSQDIHPVYSFLT-------NQNLKELLRAGANSD
A0A6J1DAX7 protein LHCP TRANSLOCATION DEFECT2.90e-1164.81Show/hide
Query:  FNYMGMLAVEGTYEEMEALLSQDIHPVYSFLT-------NQNLKELLRAGANSD
        FNYMGMLAVEGTY++MEALLSQDIHPV   L           L+ELLRAGA  D
Subjt:  FNYMGMLAVEGTYEEMEALLSQDIHPVYSFLT-------NQNLKELLRAGANSD
A0A6J1JAV9 protein LHCP TRANSLOCATION DEFECT2.95e-1164.81Show/hide
Query:  FNYMGMLAVEGTYEEMEALLSQDIHPVYSFLT-------NQNLKELLRAGANSD
        FNYMGMLAVEGTY++MEALLSQDIHPV   L           L+ELLRAGA  D
Subjt:  FNYMGMLAVEGTYEEMEALLSQDIHPVYSFLT-------NQNLKELLRAGANSD
SwissProt top hitse value%identityAlignment
A2YLX7 Protein LHCP TRANSLOCATION DEFECT9.3e-1062.96Show/hide
Query:  FNYMGMLAVEGTYEEMEALLSQDIHPVYSFL-------TNQNLKELLRAGANSD
        FNYMGMLAVEGTY++MEALL+QDIHPV   L           L+ELLRAGA  D
Subjt:  FNYMGMLAVEGTYEEMEALLSQDIHPVYSFL-------TNQNLKELLRAGANSD
A3BKF2 Protein LHCP TRANSLOCATION DEFECT9.3e-1062.96Show/hide
Query:  FNYMGMLAVEGTYEEMEALLSQDIHPVYSFL-------TNQNLKELLRAGANSD
        FNYMGMLAVEGTY++MEALL+QDIHPV   L           L+ELLRAGA  D
Subjt:  FNYMGMLAVEGTYEEMEALLSQDIHPVYSFL-------TNQNLKELLRAGANSD
Q8VY88 Protein LHCP TRANSLOCATION DEFECT4.3e-0755.77Show/hide
Query:  FNYMGMLAVEGTYEEMEALLSQDIHPVYSFL-------TNQNLKELLRAGAN
        FNYMGMLAVEGTY +MEALL+ +IHPV   L           ++ELL+AGA+
Subjt:  FNYMGMLAVEGTYEEMEALLSQDIHPVYSFL-------TNQNLKELLRAGAN
Arabidopsis top hitse value%identityAlignment
AT1G50900.1 Ankyrin repeat family protein3.1e-0855.77Show/hide
Query:  FNYMGMLAVEGTYEEMEALLSQDIHPVYSFL-------TNQNLKELLRAGAN
        FNYMGMLAVEGTY +MEALL+ +IHPV   L           ++ELL+AGA+
Subjt:  FNYMGMLAVEGTYEEMEALLSQDIHPVYSFL-------TNQNLKELLRAGAN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTAACTACATGGGAATGCTAGCTGTGGAAGGGACATATGAAGAAATGGAGGCTCTTTTGAGCCAAGACATTCACCCAGTGTACAGTTTTCTGACAAACCAAAAC
TTGAAAGAACTATTGAGAGCTGGAGCTAATTCTGAT
mRNA sequenceShow/hide mRNA sequence
TTTAACTACATGGGAATGCTAGCTGTGGAAGGGACATATGAAGAAATGGAGGCTCTTTTGAGCCAAGACATTCACCCAGTGTACAGTTTTCTGACAAACCAAAAC
TTGAAAGAACTATTGAGAGCTGGAGCTAATTCTGAT
Protein sequenceShow/hide protein sequence
FNYMGMLAVEGTYEEMEALLSQDIHPVYSFLTNQNLKELLRAGANSD