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MC00g0227 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC00g0227
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionReverse transcriptase
Genome locationscaffold99:168693..168914
RNA-Seq ExpressionMC00g0227
SyntenyMC00g0227
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW94437.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Vitis vinifera]4.37e-1044.3Show/hide
Query:  YANTYNPGWRQHPNLSWRGIQGNKPQQNMNQFK------QRGNFPHGFSRSNLQQGTKSVASSSNSMENLIKEYMAKNE
        Y+NTYNPGWR HPNLSWRG    + QQ  NQF+      Q+G  P G    N QQ  +  +SS++S+E++++E++ K +
Subjt:  YANTYNPGWRQHPNLSWRGIQGNKPQQNMNQFK------QRGNFPHGFSRSNLQQGTKSVASSSNSMENLIKEYMAKNE

RVW95284.1 hypothetical protein CK203_034226 [Vitis vinifera]1.47e-0943.04Show/hide
Query:  YANTYNPGWRQHPNLSWRGIQGNKPQQNMNQFK------QRGNFPHGFSRSNLQQGTKSVASSSNSMENLIKEYMAKNE
        Y+NTYNPGWR HPNLSWRG    + QQ  N+F+      Q+G  P G    N QQ  +  +SS++S+E++++E++ K +
Subjt:  YANTYNPGWRQHPNLSWRGIQGNKPQQNMNQFK------QRGNFPHGFSRSNLQQGTKSVASSSNSMENLIKEYMAKNE

XP_019080395.1 PREDICTED: uncharacterized protein LOC100852655 [Vitis vinifera]1.48e-0943.04Show/hide
Query:  YANTYNPGWRQHPNLSWRGIQGNKPQQNMNQFK------QRGNFPHGFSRSNLQQGTKSVASSSNSMENLIKEYMAKNE
        Y+NTYNPGWR HPNLSWRG    + QQ  N+F+      Q+G  P G    N QQ  +  +SS++S+E++++E++ K +
Subjt:  YANTYNPGWRQHPNLSWRGIQGNKPQQNMNQFK------QRGNFPHGFSRSNLQQGTKSVASSSNSMENLIKEYMAKNE

XP_034672614.1 uncharacterized protein LOC117904214 [Vitis riparia]1.45e-0943.04Show/hide
Query:  YANTYNPGWRQHPNLSWRGIQGNKPQQNMNQFK------QRGNFPHGFSRSNLQQGTKSVASSSNSMENLIKEYMAKNE
        Y+NTYNPGWR HPNLSWRG    + QQ  N+F+      Q+G  P G    N QQ  +  +SS++S+E++++E++ K +
Subjt:  YANTYNPGWRQHPNLSWRGIQGNKPQQNMNQFK------QRGNFPHGFSRSNLQQGTKSVASSSNSMENLIKEYMAKNE

XP_034681081.1 uncharacterized protein LOC117911023 [Vitis riparia]1.22e-1044.3Show/hide
Query:  YANTYNPGWRQHPNLSWRGIQGNKPQQNMNQFK------QRGNFPHGFSRSNLQQGTKSVASSSNSMENLIKEYMAKNE
        Y+NTYNPGWR HPNLSWRG    + QQ  N+F+      Q+G  P G S  N QQ  +  +SS++S+E++++E++ K +
Subjt:  YANTYNPGWRQHPNLSWRGIQGNKPQQNMNQFK------QRGNFPHGFSRSNLQQGTKSVASSSNSMENLIKEYMAKNE

TrEMBL top hitse value%identityAlignment
A0A438DH48 Retrovirus-related Pol polyprotein from transposon 17.67.34e-1043.04Show/hide
Query:  YANTYNPGWRQHPNLSWRGIQGNKPQQNMNQFK------QRGNFPHGFSRSNLQQGTKSVASSSNSMENLIKEYMAKNE
        Y+NTYNPGWR HPNLSWRG    + QQ  N+F+      Q+G  P G    N QQ  +  +SS++S+E++++E++ K +
Subjt:  YANTYNPGWRQHPNLSWRGIQGNKPQQNMNQFK------QRGNFPHGFSRSNLQQGTKSVASSSNSMENLIKEYMAKNE

A0A438E1G3 Retrotrans_gag domain-containing protein7.16e-1043.04Show/hide
Query:  YANTYNPGWRQHPNLSWRGIQGNKPQQNMNQFK------QRGNFPHGFSRSNLQQGTKSVASSSNSMENLIKEYMAKNE
        Y+NTYNPGWR HPNLSWRG    + QQ  N+F+      Q+G  P G    N QQ  +  +SS++S+E++++E++ K +
Subjt:  YANTYNPGWRQHPNLSWRGIQGNKPQQNMNQFK------QRGNFPHGFSRSNLQQGTKSVASSSNSMENLIKEYMAKNE

A0A438HB08 Retrovirus-related Pol polyprotein from transposon 17.67.35e-1043.04Show/hide
Query:  YANTYNPGWRQHPNLSWRGIQGNKPQQNMNQFK------QRGNFPHGFSRSNLQQGTKSVASSSNSMENLIKEYMAKNE
        Y+NTYNPGWR HPNLSWRG    + QQ  N+F+      Q+G  P G    N QQ  +  +SS++S+E++++E++ K +
Subjt:  YANTYNPGWRQHPNLSWRGIQGNKPQQNMNQFK------QRGNFPHGFSRSNLQQGTKSVASSSNSMENLIKEYMAKNE

A0A438ICR6 Reverse transcriptase2.11e-1044.3Show/hide
Query:  YANTYNPGWRQHPNLSWRGIQGNKPQQNMNQFK------QRGNFPHGFSRSNLQQGTKSVASSSNSMENLIKEYMAKNE
        Y+NTYNPGWR HPNLSWRG    + QQ  NQF+      Q+G  P G    N QQ  +  +SS++S+E++++E++ K +
Subjt:  YANTYNPGWRQHPNLSWRGIQGNKPQQNMNQFK------QRGNFPHGFSRSNLQQGTKSVASSSNSMENLIKEYMAKNE

A0A438IEZ3 Retrotrans_gag domain-containing protein7.12e-1043.04Show/hide
Query:  YANTYNPGWRQHPNLSWRGIQGNKPQQNMNQFK------QRGNFPHGFSRSNLQQGTKSVASSSNSMENLIKEYMAKNE
        Y+NTYNPGWR HPNLSWRG    + QQ  N+F+      Q+G  P G    N QQ  +  +SS++S+E++++E++ K +
Subjt:  YANTYNPGWRQHPNLSWRGIQGNKPQQNMNQFK------QRGNFPHGFSRSNLQQGTKSVASSSNSMENLIKEYMAKNE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTATATGCTAACACTTATAATCCGGGGTGGAGGCAACATCCTAATTTAAGTTGGAGAGGAATTCAAGGGAATAAACCACAACAAAATATGAATCAATTTAAGCAAAGAGG
AAATTTCCCACATGGTTTTTCGAGATCCAACCTGCAGCAAGGTACAAAGTCAGTAGCAAGTTCCTCTAACTCGATGGAGAACCTAATAAAAGAGTACATGGCCAAGAATG
AG
mRNA sequenceShow/hide mRNA sequence
TTATATGCTAACACTTATAATCCGGGGTGGAGGCAACATCCTAATTTAAGTTGGAGAGGAATTCAAGGGAATAAACCACAACAAAATATGAATCAATTTAAGCAAAGAGG
AAATTTCCCACATGGTTTTTCGAGATCCAACCTGCAGCAAGGTACAAAGTCAGTAGCAAGTTCCTCTAACTCGATGGAGAACCTAATAAAAGAGTACATGGCCAAGAATG
AG
Protein sequenceShow/hide protein sequence
LYANTYNPGWRQHPNLSWRGIQGNKPQQNMNQFKQRGNFPHGFSRSNLQQGTKSVASSSNSMENLIKEYMAKNE