; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC00g0247 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC00g0247
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description40S ribosomal protein SA
Genome locationscaffold25:50681..51724
RNA-Seq ExpressionMC00g0247
SyntenyMC00g0247
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0002181 - cytoplasmic translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001865 - Ribosomal protein S2
IPR005707 - Ribosomal protein S2, eukaryotic/archaeal
IPR023591 - Ribosomal protein S2, flavodoxin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144441.1 40S ribosomal protein SA isoform X1 [Cucumis sativus]3.36e-10266.67Show/hide
Query:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLK---------
        GIYIINL KTWEKLQLAARVIV IENP DIIVQSARPYGQRAVLK AQ+TGA           FTNQLQTSFNEPRLLILTD RTDHQ +K         
Subjt:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLK---------

Query:  --------PIKRLIIVCSYK-----SIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQV
                P++ + I          SIGCLFWLL RMVLQMRGTI AGH+WDVMVDLFFYREPEEAKE+EEEEAVAPPDYGIAD+G APLVASDQWAGQ+
Subjt:  --------PIKRLIIVCSYK-----SIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQV

Query:  PDAQWGAPDVVPAP-----VAPPI---QWFEQ----VAADGWDAAPAPAPAPAPAVEGGAPPASGWF
         DAQWGAPD++PAP     V PP+   +W ++    +A+DGWDAA   AP PAP+ EGGAP AS WF
Subjt:  PDAQWGAPDVVPAP-----VAPPI---QWFEQ----VAADGWDAAPAPAPAPAPAVEGGAPPASGWF

XP_022152685.1 40S ribosomal protein SA-like [Momordica charantia]8.34e-10971.76Show/hide
Query:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLK---------
        GIYIINL KTWEKLQLAARVIVAIENP DIIVQSARPYGQRAVLK AQYTGA           FTNQLQTSFNEPRLLILTD RTDHQ +K         
Subjt:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLK---------

Query:  --------PIKRLIIVCSYK-----SIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQV
                P++ + I          SIGCLFWLL RMVLQMRGTI AGHKWDVMVDLFFYREPEEAKEQEEEEAVAP DYGIADFGAAPLVASDQWAGQ+
Subjt:  --------PIKRLIIVCSYK-----SIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQV

Query:  PDAQWGAPDVVPAPVAPPI---QWFEQV----AADGWDAAPAPAPAPAPAVEGGAPPASGWF
         DAQWGAPDVVPA  APP+   +W ++     AADGWDAA    P PAPAVEGGAPPASGWF
Subjt:  PDAQWGAPDVVPAPVAPPI---QWFEQV----AADGWDAAPAPAPAPAPAVEGGAPPASGWF

XP_022155491.1 40S ribosomal protein SA-like [Momordica charantia]1.17e-10469.47Show/hide
Query:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLK---------
        GIYIINL KTWEKLQLAARVIVAIENP DIIVQSARPYGQRAVLK AQYTGA           FTNQLQTSFNEPRLLILTD RTDHQ +K         
Subjt:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLK---------

Query:  --------PIKRLIIVCSYK-----SIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQV
                P++ + I          SIGCLFWLL RMVLQMRGTI AGHKWDVMVDLFFYREPEEAKEQEEEEA APPDYGIADFGAAPLVASDQWAGQ+
Subjt:  --------PIKRLIIVCSYK-----SIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQV

Query:  PDAQWGAPDVV-PAPVAP--PIQWFEQVAA----DGWDAAPAPAPAPAPAVEGGAPPASGWF
        PDAQWGAPDVV PA  AP   ++W ++ AA    DGWDA     P PAPAV+  APPA+ WF
Subjt:  PDAQWGAPDVV-PAPVAP--PIQWFEQVAA----DGWDAAPAPAPAPAPAVEGGAPPASGWF

XP_031738662.1 40S ribosomal protein SA isoform X2 [Cucumis sativus]2.29e-10266.92Show/hide
Query:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLK---------
        GIYIINL KTWEKLQLAARVIV IENP DIIVQSARPYGQRAVLK AQ+TGA           FTNQLQTSFNEPRLLILTD RTDHQ +K         
Subjt:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLK---------

Query:  --------PIKRLIIVCSYK-----SIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQV
                P++ + I          SIGCLFWLL RMVLQMRGTI AGH+WDVMVDLFFYREPEEAKE+EEEEAVAPPDYGIAD+G APLVASDQWAGQ+
Subjt:  --------PIKRLIIVCSYK-----SIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQV

Query:  PDAQWGAPDVVPAP-----VAPPI---QWFEQ---VAADGWDAAPAPAPAPAPAVEGGAPPASGWF
         DAQWGAPD++PAP     V PP+   +W ++   +A+DGWDAA   AP PAP+ EGGAP AS WF
Subjt:  PDAQWGAPDVVPAP-----VAPPI---QWFEQ---VAADGWDAAPAPAPAPAPAVEGGAPPASGWF

XP_038903491.1 40S ribosomal protein SA-like [Benincasa hispida]1.35e-10367.05Show/hide
Query:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLK---------
        GIYIINL KTWEKLQLAARVIV IENP DIIVQSARPYGQRAVLK AQ+TGA           FTNQLQTSFNEPRLLILTD RTDHQ +K         
Subjt:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLK---------

Query:  --------PIKRLIIVCSYK-----SIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQV
                P++ + I          SIGCLFWLL RMVLQMRGTI AGH+WDVMVDLFFYREPEEAKE+EEEEAVAPPDYGIAD+G A LV+SDQWAGQ+
Subjt:  --------PIKRLIIVCSYK-----SIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQV

Query:  PDAQWGAPDVVPAP---VAPPI---QWFEQ---VAADGWDAAPAPAPAPAPAVEGGAPPASGWF
         DAQWGAPDVVPAP   +APP+   +W ++   +A+DGWDAA    P PAP+ EGGAPPA+ WF
Subjt:  PDAQWGAPDVVPAP---VAPPI---QWFEQ---VAADGWDAAPAPAPAPAPAVEGGAPPASGWF

TrEMBL top hitse value%identityAlignment
A0A0A0L946 40S ribosomal protein SA1.62e-10266.67Show/hide
Query:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLK---------
        GIYIINL KTWEKLQLAARVIV IENP DIIVQSARPYGQRAVLK AQ+TGA           FTNQLQTSFNEPRLLILTD RTDHQ +K         
Subjt:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLK---------

Query:  --------PIKRLIIVCSYK-----SIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQV
                P++ + I          SIGCLFWLL RMVLQMRGTI AGH+WDVMVDLFFYREPEEAKE+EEEEAVAPPDYGIAD+G APLVASDQWAGQ+
Subjt:  --------PIKRLIIVCSYK-----SIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQV

Query:  PDAQWGAPDVVPAP-----VAPPI---QWFEQ----VAADGWDAAPAPAPAPAPAVEGGAPPASGWF
         DAQWGAPD++PAP     V PP+   +W ++    +A+DGWDAA   AP PAP+ EGGAP AS WF
Subjt:  PDAQWGAPDVVPAP-----VAPPI---QWFEQ----VAADGWDAAPAPAPAPAPAVEGGAPPASGWF

A0A1S3CDH5 40S ribosomal protein SA2.16e-10267.17Show/hide
Query:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLK---------
        GIYIINL KTWEKLQLAARVIV IENP DIIVQSARPYGQRAVLK AQ+TGA           FTNQLQTSFNEPRLLILTD RTDHQ +K         
Subjt:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLK---------

Query:  --------PIKRLIIVCSYK-----SIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQV
                P++ + I          SIGCLFWLL RMVLQMRGTI AGH+WDVMVDLFFYREPEEAKE+EEEEAVAPPDYGIAD+G APLVASDQWAGQ+
Subjt:  --------PIKRLIIVCSYK-----SIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQV

Query:  PDAQWGAPDVVPAP----VAPPI---QWFEQ---VAADGWDAAPAPAPAPAPAVEGGAPPASGWF
         DAQWGAPD++PAP    V PP+   +W ++   +A+DGWDAA    P PAPA EGGAP AS WF
Subjt:  PDAQWGAPDVVPAP----VAPPI---QWFEQ---VAADGWDAAPAPAPAPAPAVEGGAPPASGWF

A0A6J1DEM6 40S ribosomal protein SA4.04e-10971.76Show/hide
Query:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLK---------
        GIYIINL KTWEKLQLAARVIVAIENP DIIVQSARPYGQRAVLK AQYTGA           FTNQLQTSFNEPRLLILTD RTDHQ +K         
Subjt:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLK---------

Query:  --------PIKRLIIVCSYK-----SIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQV
                P++ + I          SIGCLFWLL RMVLQMRGTI AGHKWDVMVDLFFYREPEEAKEQEEEEAVAP DYGIADFGAAPLVASDQWAGQ+
Subjt:  --------PIKRLIIVCSYK-----SIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQV

Query:  PDAQWGAPDVVPAPVAPPI---QWFEQV----AADGWDAAPAPAPAPAPAVEGGAPPASGWF
         DAQWGAPDVVPA  APP+   +W ++     AADGWDAA    P PAPAVEGGAPPASGWF
Subjt:  PDAQWGAPDVVPAPVAPPI---QWFEQV----AADGWDAAPAPAPAPAPAVEGGAPPASGWF

A0A6J1DWT5 40S ribosomal protein SA5.65e-10569.47Show/hide
Query:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLK---------
        GIYIINL KTWEKLQLAARVIVAIENP DIIVQSARPYGQRAVLK AQYTGA           FTNQLQTSFNEPRLLILTD RTDHQ +K         
Subjt:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLK---------

Query:  --------PIKRLIIVCSYK-----SIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQV
                P++ + I          SIGCLFWLL RMVLQMRGTI AGHKWDVMVDLFFYREPEEAKEQEEEEA APPDYGIADFGAAPLVASDQWAGQ+
Subjt:  --------PIKRLIIVCSYK-----SIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQV

Query:  PDAQWGAPDVV-PAPVAP--PIQWFEQVAA----DGWDAAPAPAPAPAPAVEGGAPPASGWF
        PDAQWGAPDVV PA  AP   ++W ++ AA    DGWDA     P PAPAV+  APPA+ WF
Subjt:  PDAQWGAPDVV-PAPVAP--PIQWFEQVAA----DGWDAAPAPAPAPAPAVEGGAPPASGWF

A0A6J1GCP6 40S ribosomal protein SA2.79e-10065.91Show/hide
Query:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLK---------
        GIYIINL KTWEKLQ+AARVIV IENP DIIVQSARPYGQRAVLK AQ+TGA           FTNQLQTSFNEPRLLILTD RTDHQ +K         
Subjt:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLK---------

Query:  --------PIKRLIIVCSYK-----SIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQV
                P++ + I          SIGCLFWLL RMVLQMRGTI AGHKWDVMVDLFFYREPEEAKE+EEE AVAPPDYGIAD+GAAPLVASDQWAGQ+
Subjt:  --------PIKRLIIVCSYK-----SIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQV

Query:  PDAQWGAPDVVPAPVA-------PPIQWFEQ---VAADGWDAAPAPAPAPAPAVEGGAPPASGW
         DAQWG PDVVP PVA       P ++W ++   +A+DGWD A    P PAP+ EG APPA+ W
Subjt:  PDAQWGAPDVVPAPVA-------PPIQWFEQ---VAADGWDAAPAPAPAPAPAVEGGAPPASGW

SwissProt top hitse value%identityAlignment
A5BUU4 40S ribosomal protein SA2.3e-6658.43Show/hide
Query:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLK---------
        GIYIINL KTWEKLQLAARVIVAIENP DIIVQSARPYGQRAVLK AQYTGA           FTNQLQTSF+EPRLLILTD RTDHQ +K         
Subjt:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLK---------

Query:  --------PIKRLIIVC-----SYKSIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPL--VASDQWAG
                P++ + I          SIGCLFWLL RMVLQMR TI  GHKWDVMVDLFFYREPEE KEQE +E VA PDYGI D+ A  L  +    W  
Subjt:  --------PIKRLIIVC-----SYKSIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPL--VASDQWAG

Query:  QVPDA-QWGA--PDVVPAPVAPPIQWFE--------QVAADGWDAAPAPAPAPAPAVEGGAPPASGW
         + DA QWGA  P V P P  P   W +         +A DGWDAA AP  A  P V  G PP +GW
Subjt:  QVPDA-QWGA--PDVVPAPVAPPIQWFE--------QVAADGWDAAPAPAPAPAPAVEGGAPPASGW

O22518 40S ribosomal protein SA1.2e-5957.31Show/hide
Query:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLK---------
        GIYIINL KTWEKLQLAARVIVAIENP DIIVQSARPYGQRAVLK AQYTGA           FTNQLQTSF+EPRLLILTD RTDHQ +K         
Subjt:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLK---------

Query:  --------PIKRLIIVC-----SYKSIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQV
                P++ + I          SIGCLFWLL RMVLQMRGTI  G KWDVMVDLFFYREPEEAK+QEEEEA A  DY I DF A  + A  QW G +
Subjt:  --------PIKRLIIVC-----SYKSIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQV

Query:  PDAQWGAPDVVPAPVAPPIQW---FEQVAADGWD---AAPAPAPAPAPAVEGGAPPASGW
         D  W      P P  P + W    E  AA G D   A P P   P P         SGW
Subjt:  PDAQWGAPDVVPAPVAPPIQW---FEQVAADGWD---AAPAPAPAPAPAVEGGAPPASGW

O65751 40S ribosomal protein SA3.5e-5955.47Show/hide
Query:  GIYIINLAKTWEKLQLAARVIVAIEN-PDIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLKPIK----RL
        GIYIINL KTW+KL LAAR+IVAIEN  DIIVQSARPYGQRAVLK AQYTGA           FTNQLQTSF+EPRLLILTD RTDHQ +K         
Subjt:  GIYIINLAKTWEKLQLAARVIVAIEN-PDIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLKPIK----RL

Query:  IIVC------------------SYKSIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQV
        I  C                     SIGCLFWLL RMVLQMRGTI  G KWDVMVDLFFYREPEEAK+ EE+E VA PDY IADF  + + +  QW   +
Subjt:  IIVC------------------SYKSIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQV

Query:  PDAQWGAPDVVPAPVAPPIQWF--EQVAADGWDAAPAPAPAPAPAVEGGAPPASGW
         D  W      P P  P + W   E VA D  +A P P   P   +E  + PA+GW
Subjt:  PDAQWGAPDVVPAPVAPPIQWF--EQVAADGWDAAPAPAPAPAPAVEGGAPPASGW

O80377 40S ribosomal protein SA7.6e-6258.75Show/hide
Query:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLK---------
        GIYIINL KTWEKL LAARVIV+IENP DIIVQSARPYGQRAVLK AQYTGA           FTNQLQTSF+EPRLLILTD RTDHQ +K         
Subjt:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLK---------

Query:  --------PIKRLIIVC-----SYKSIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQV
                P++ + I          SIGCLFWLL RMVLQMRG I  GHKW+VMVDLFFYREPEE K+QEEE+ +   DY +AD+ AAP+  +DQW   +
Subjt:  --------PIKRLIIVC-----SYKSIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQV

Query:  PDAQWGAPDVVPAPVAPPI-QWFE--QVAADGWDAAPAPAPAPAPAVEGGAPPASGW
        PDAQWG   V PA  A P   W +   +A DGWDAA AP P P  AV    P  +GW
Subjt:  PDAQWGAPDVVPAPVAPPI-QWFE--QVAADGWDAAPAPAPAPAPAVEGGAPPASGW

Q08682 40S ribosomal protein Sa-13.0e-5855.73Show/hide
Query:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLKPIKR-----
        GIYI NL KTWEKLQ+AARVIVAIENP DIIVQSARPYGQRAVLK AQYTGA           FTNQ+QTSF+EPRLLILTD RTDHQ   PIK      
Subjt:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLKPIKR-----

Query:  --LIIVC------------------SYKSIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQW-
          +I  C                     SIGCLFWLL RMVLQMRGTI AG KWDVMVDLFFYREPEE K ++E+EA    +YG        +V  DQW 
Subjt:  --LIIVC------------------SYKSIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQW-

Query:  AGQVPDAQWGAPDVVPAPVAP-PIQWFEQVAA---DGWDAAPAPAPAPAPAVE
          Q+PDA W      P   AP    W +  AA    GW+AA  P+ APA   E
Subjt:  AGQVPDAQWGAPDVVPAPVAP-PIQWFEQVAA---DGWDAAPAPAPAPAPAVE

Arabidopsis top hitse value%identityAlignment
AT1G72370.1 40s ribosomal protein SA2.1e-5955.73Show/hide
Query:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLKPIKR-----
        GIYI NL KTWEKLQ+AARVIVAIENP DIIVQSARPYGQRAVLK AQYTGA           FTNQ+QTSF+EPRLLILTD RTDHQ   PIK      
Subjt:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLKPIKR-----

Query:  --LIIVC------------------SYKSIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQW-
          +I  C                     SIGCLFWLL RMVLQMRGTI AG KWDVMVDLFFYREPEE K ++E+EA    +YG        +V  DQW 
Subjt:  --LIIVC------------------SYKSIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQW-

Query:  AGQVPDAQWGAPDVVPAPVAP-PIQWFEQVAA---DGWDAAPAPAPAPAPAVE
          Q+PDA W      P   AP    W +  AA    GW+AA  P+ APA   E
Subjt:  AGQVPDAQWGAPDVVPAPVAP-PIQWFEQVAA---DGWDAAPAPAPAPAPAVE

AT1G72370.2 40s ribosomal protein SA7.3e-6055.82Show/hide
Query:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLKPIKR-----
        GIYI NL KTWEKLQ+AARVIVAIENP DIIVQSARPYGQRAVLK AQYTGA           FTNQ+QTSF+EPRLLILTD RTDHQ   PIK      
Subjt:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTGA----------AFTNQLQTSFNEPRLLILTDSRTDHQVLKPIKR-----

Query:  --LIIVC------------------SYKSIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQW-
          +I  C                     SIGCLFWLL RMVLQMRGTI AG KWDVMVDLFFYREPEE K ++E+EA    +YG        +V  DQW 
Subjt:  --LIIVC------------------SYKSIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQW-

Query:  AGQVPDAQWGAPDVVPAPVAPPIQWFEQVAADGWDAAPAPAPAPAPAVE
          Q+PDA W      P   AP    +   A  GW+AA  P+ APA   E
Subjt:  AGQVPDAQWGAPDVVPAPVAPPIQWFEQVAADGWDAAPAPAPAPAPAVE

AT3G04770.1 40s ribosomal protein SA B1.0e-4062.26Show/hide
Query:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTG----------AAFTNQLQTSFNEPRLLILTDSRTDHQVLKPIKR-----
        GIYIINL KTW+KLQ+AARVIVAIENP DIIVQSARPYGQRAVLK AQYTG            FTNQ+QTSF+EPRLLILTD RTDHQ   PIK      
Subjt:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTG----------AAFTNQLQTSFNEPRLLILTDSRTDHQVLKPIKR-----

Query:  --LIIVC------------------SYKSIGCLFWLLVRMVLQMRGTIHAGHKWDVMVD
           I  C                     SIGCLFWLL RMVLQMRGTI A  KWDVMV+
Subjt:  --LIIVC------------------SYKSIGCLFWLLVRMVLQMRGTIHAGHKWDVMVD

AT3G04770.2 40s ribosomal protein SA B4.9e-5656.02Show/hide
Query:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTG----------AAFTNQLQTSFNEPRLLILTDSRTDHQVLKPIKR-----
        GIYIINL KTW+KLQ+AARVIVAIENP DIIVQSARPYGQRAVLK AQYTG            FTNQ+QTSF+EPRLLILTD RTDHQ   PIK      
Subjt:  GIYIINLAKTWEKLQLAARVIVAIENP-DIIVQSARPYGQRAVLKLAQYTG----------AAFTNQLQTSFNEPRLLILTDSRTDHQVLKPIKR-----

Query:  --LIIVC------------------SYKSIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQW-
           I  C                     SIGCLFWLL RMVLQMRGTI A  KWDVMVDLFFYREPEEAK++ +EEA    DYG        +V  DQW 
Subjt:  --LIIVC------------------SYKSIGCLFWLLVRMVLQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQW-

Query:  AGQVPDAQWGAPDVVPAPVAPPIQWFEQVAADGWDAAPAPA
          Q+ DA W      P   AP +       A GW+AA  PA
Subjt:  AGQVPDAQWGAPDVVPAPVAPPIQWFEQVAADGWDAAPAPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGAATTTACATCATCAACCTTGCTAAGACATGGGAGAAACTCCAATTGGCTGCCAGAGTAATTGTGGCTATTGAGAATCCTGATATCATTGTCCAGTCTGCTAGG
CCTTATGGTCAGAGAGCCGTTTTGAAGCTTGCTCAATACACTGGTGCGGCATTCACCAACCAGCTTCAGACCTCATTCAATGAACCACGACTTCTGATACTTACT
GATTCTAGAACTGATCATCAGGTGCTTAAACCTATTAAGAGATTAATAATAGTTTGCAGTTATAAGAGTATAGGATGTCTGTTTTGGCTTCTGGTGAGGATGGTT
CTGCAGATGCGTGGAACAATTCATGCTGGGCACAAGTGGGACGTGATGGTGGATTTATTTTTCTATCGGGAGCCTGAGGAAGCTAAGGAGCAAGAAGAAGAAGAG
GCTGTTGCGCCTCCAGATTATGGCATTGCAGATTTCGGAGCTGCTCCGCTTGTTGCTTCAGATCAATGGGCTGGACAGGTTCCTGATGCTCAGTGGGGTGCTCCT
GATGTGGTTCCAGCTCCTGTTGCTCCACCCATCCAGTGGTTCGAGCAAGTTGCAGCAGACGGATGGGATGCAGCACCAGCACCAGCGCCAGCACCAGCGCCAGCA
GTTGAAGGTGGTGCACCTCCGGCTTCCGGTTGGTTC
mRNA sequenceShow/hide mRNA sequence
GGAATTTACATCATCAACCTTGCTAAGACATGGGAGAAACTCCAATTGGCTGCCAGAGTAATTGTGGCTATTGAGAATCCTGATATCATTGTCCAGTCTGCTAGG
CCTTATGGTCAGAGAGCCGTTTTGAAGCTTGCTCAATACACTGGTGCGGCATTCACCAACCAGCTTCAGACCTCATTCAATGAACCACGACTTCTGATACTTACT
GATTCTAGAACTGATCATCAGGTGCTTAAACCTATTAAGAGATTAATAATAGTTTGCAGTTATAAGAGTATAGGATGTCTGTTTTGGCTTCTGGTGAGGATGGTT
CTGCAGATGCGTGGAACAATTCATGCTGGGCACAAGTGGGACGTGATGGTGGATTTATTTTTCTATCGGGAGCCTGAGGAAGCTAAGGAGCAAGAAGAAGAAGAG
GCTGTTGCGCCTCCAGATTATGGCATTGCAGATTTCGGAGCTGCTCCGCTTGTTGCTTCAGATCAATGGGCTGGACAGGTTCCTGATGCTCAGTGGGGTGCTCCT
GATGTGGTTCCAGCTCCTGTTGCTCCACCCATCCAGTGGTTCGAGCAAGTTGCAGCAGACGGATGGGATGCAGCACCAGCACCAGCGCCAGCACCAGCGCCAGCA
GTTGAAGGTGGTGCACCTCCGGCTTCCGGTTGGTTC
Protein sequenceShow/hide protein sequence
GIYIINLAKTWEKLQLAARVIVAIENPDIIVQSARPYGQRAVLKLAQYTGAAFTNQLQTSFNEPRLLILTDSRTDHQVLKPIKRLIIVCSYKSIGCLFWLLVRMV
LQMRGTIHAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQVPDAQWGAPDVVPAPVAPPIQWFEQVAADGWDAAPAPAPAPAPA
VEGGAPPASGWF