; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC00g0253 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC00g0253
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description30S ribosomal protein S7, chloroplastic
Genome locationscaffold25:229128..229265
RNA-Seq ExpressionMC00g0253
SyntenyMC00g0253
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000235 - Ribosomal protein S5/S7
IPR023798 - Ribosomal protein S7 domain
IPR036823 - Ribosomal protein S7 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2041368.1 hypothetical protein ES319_D02G143700v1 [Gossypium barbadense]4.17e-1884.78Show/hide
Query:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
        N +S+LRQ IRGVTPDIVV  RRVGGSTHQVPIEIGSTQGK LAIR
Subjt:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
RZC87218.1 hypothetical protein C5167_007849 [Papaver somniferum]7.80e-1886.96Show/hide
Query:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
        N +SVLRQ IRGVTPDI VT RRVGGSTHQVPIEIGSTQGK LAIR
Subjt:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
TYG79637.1 hypothetical protein ES288_D02G154200v1 [Gossypium darwinii]3.38e-1884.78Show/hide
Query:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
        N +S+LRQ IRGVTPDIVV  RRVGGSTHQVPIEIGSTQGK LAIR
Subjt:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
TYH83849.1 hypothetical protein ES332_D02G159700v1 [Gossypium tomentosum]6.61e-1884.78Show/hide
Query:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
        N +S+LRQ IRGVTPDIVV  RRVGGSTHQVPIEIGSTQGK LAIR
Subjt:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
TYJ46772.1 hypothetical protein E1A91_A02G141500v1, partial [Gossypium mustelinum]6.75e-1884.78Show/hide
Query:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
        N +SVLRQ IRGVTPDI V  RRVGGSTHQVPIEIGSTQGK LAIR
Subjt:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
TrEMBL top hitse value%identityAlignment
A0A5D2DDB5 Ribosomal_S7 domain-containing protein1.63e-1884.78Show/hide
Query:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
        N +S+LRQ IRGVTPDIVV  RRVGGSTHQVPIEIGSTQGK LAIR
Subjt:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
A0A5D2LXT0 Uncharacterized protein3.20e-1884.78Show/hide
Query:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
        N +S+LRQ IRGVTPDIVV  RRVGGSTHQVPIEIGSTQGK LAIR
Subjt:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
A0A5D3A7A7 Ribosomal_S7 domain-containing protein (Fragment)3.27e-1884.78Show/hide
Query:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
        N +SVLRQ IRGVTPDI V  RRVGGSTHQVPIEIGSTQGK LAIR
Subjt:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
A0A5J5SEM9 Uncharacterized protein2.02e-1884.78Show/hide
Query:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
        N +S+LRQ IRGVTPDIVV  RRVGGSTHQVPIEIGSTQGK LAIR
Subjt:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
A0A5J5T0K2 Ribosomal_S7 domain-containing protein5.01e-1886.96Show/hide
Query:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
        N +SVLRQ IRGVTPDI V  RRVGGSTHQVPIEIGSTQGKTLAIR
Subjt:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
SwissProt top hitse value%identityAlignment
A4QJG0 30S ribosomal protein S7, chloroplastic2.7e-1484.78Show/hide
Query:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
        N +SVLRQ IRGVTPDI V  RRVGGSTHQVPIEIGSTQGK LAIR
Subjt:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
A9L9E1 30S ribosomal protein S7, chloroplastic2.1e-1484.78Show/hide
Query:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
        N +SVLRQ IRGVTPDI V  RRVGGSTHQVPIEIGSTQGK LAIR
Subjt:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
A9LYE6 30S ribosomal protein S7, chloroplastic2.1e-1484.78Show/hide
Query:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
        N +SVLRQ IRGVTPDI V  RRVGGSTHQVPIEIGSTQGK LAIR
Subjt:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
Q9GFK8 30S ribosomal protein S7, chloroplastic9.4e-1586.96Show/hide
Query:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
        N +SVLRQ IRGVTPDIVV  RRVGGSTHQVPIEIGSTQGK LAIR
Subjt:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
Q9GFN5 30S ribosomal protein S7, chloroplastic2.1e-1484.78Show/hide
Query:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
        N +SVLRQ IRGVTPDI V  RRVGGSTHQVPIEIGSTQGK LAIR
Subjt:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
Arabidopsis top hitse value%identityAlignment
ATCG00900.1 Ribosomal protein S7p/S5e family protein1.9e-1584.78Show/hide
Query:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
        N +SVLRQ IRGVTPDI V  RRVGGSTHQVPIEIGSTQGK LAIR
Subjt:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
ATCG01240.1 ribosomal protein S71.9e-1584.78Show/hide
Query:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR
        N +SVLRQ IRGVTPDI V  RRVGGSTHQVPIEIGSTQGK LAIR
Subjt:  NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATAACATCTCTGTTTTACGTCAAGGAATACGTGGAGTAACTCCCGATATAGTAGTAACGGAAAGACGTGTAGGCGGATCAACTCATCAAGTTCCAATTGAAATAGGATC
CACACAAGGAAAAACACTTGCCATTCGT
mRNA sequenceShow/hide mRNA sequence
AATAACATCTCTGTTTTACGTCAAGGAATACGTGGAGTAACTCCCGATATAGTAGTAACGGAAAGACGTGTAGGCGGATCAACTCATCAAGTTCCAATTGAAATAGGATC
CACACAAGGAAAAACACTTGCCATTCGT
Protein sequenceShow/hide protein sequence
NNISVLRQGIRGVTPDIVVTERRVGGSTHQVPIEIGSTQGKTLAIR