; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC00g0304 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC00g0304
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRNA polymerase II elongation factor ELL3 isoform 1
Genome locationscaffold113:78838..79476
RNA-Seq ExpressionMC00g0304
SyntenyMC00g0304
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015562.1 hypothetical protein SDJN02_23198, partial [Cucurbita argyrosperma subsp. argyrosperma]4.31e-8661.97Show/hide
Query:  AHVVEIQIPIPAGQEDDENKKLICMAIEQHPLREISERPGHLLLLKLWQREERLLGVRMAGREARMESQKQQIFHLCCFFLLFHALALTLLFTAPEDGGA
        AHVVEI    PA     EN+ ++   IEQHPLR+ISE  GHLLLLKLWQREE L G+R+  RE ++ES KQQIF LCC+F LFHAL+LTLLFT+  D   
Subjt:  AHVVEIQIPIPAGQEDDENKKLICMAIEQHPLREISERPGHLLLLKLWQREERLLGVRMAGREARMESQKQQIFHLCCFFLLFHALALTLLFTAPEDGGA

Query:  CRRWWAAGVAVGATSAVMAVLVQARVWAYWKAAGRLQRDRDSNRALLRCVQELRMKGGSFNLNKQPIVGKRMKSSSVEIKWGPLTWCSRNLPAVSLLCSA
        C +WW  GVA+GATS V  ++VQ ++W YWKA+ +LQR++  NRAL RCVQELRMKG  FNL+K+P +G RMKSSSVEIKWGPLTW SRN   + LLC +
Subjt:  CRRWWAAGVAVGATSAVMAVLVQARVWAYWKAAGRLQRDRDSNRALLRCVQELRMKGGSFNLNKQPIVGKRMKSSSVEIKWGPLTWCSRNLPAVSLLCSA

Query:  GAVVAASRFLLCG
        G V  AS+F+LCG
Subjt:  GAVVAASRFLLCG
XP_008449068.1 PREDICTED: uncharacterized protein LOC103491049 [Cucumis melo]3.56e-8358.69Show/hide
Query:  AHVVEIQIPIPAGQEDDENKKLICMAIEQHPLREISERPGHLLLLKLWQREERLLGVRMAGREARMESQKQQIFHLCCFFLLFHALALTLLFTAPEDGGA
        AH+VEI +     ++++  + L+   I+ HPLR+ISE  GHLLLLKLWQR+E L G+R+  RE +MES KQQIF LCCFF LFHAL+LTLL+T+  D   
Subjt:  AHVVEIQIPIPAGQEDDENKKLICMAIEQHPLREISERPGHLLLLKLWQREERLLGVRMAGREARMESQKQQIFHLCCFFLLFHALALTLLFTAPEDGGA

Query:  CRRWWAAGVAVGATSAVMAVLVQARVWAYWKAAGRLQRDRDSNRALLRCVQELRMKGGSFNLNKQPIVGKRMKSSSVEIKWGPLTWCSRNLPAVSLLCSA
        C++WW   V +GATS V  ++VQ ++W YWKA G+LQR++  NRAL RC QELRMKG  FNL+K+P +G RMKSSSVEIKWGPLTW SRN  A+SLL  +
Subjt:  CRRWWAAGVAVGATSAVMAVLVQARVWAYWKAAGRLQRDRDSNRALLRCVQELRMKGGSFNLNKQPIVGKRMKSSSVEIKWGPLTWCSRNLPAVSLLCSA

Query:  GAVVAASRFLLCG
          V AAS+F+LCG
Subjt:  GAVVAASRFLLCG
XP_022932317.1 uncharacterized protein LOC111438709 [Cucurbita moschata]4.08e-8461.5Show/hide
Query:  AHVVEIQIPIPAGQEDDENKKLICMAIEQHPLREISERPGHLLLLKLWQREERLLGVRMAGREARMESQKQQIFHLCCFFLLFHALALTLLFTAPEDGGA
        AHVVEI    PA     EN+ ++   IEQHPLR+ISE  GHLLLLKLWQREE L G+R+  RE ++ES KQQIF LCC+F LFHAL+LTLLFT+  D   
Subjt:  AHVVEIQIPIPAGQEDDENKKLICMAIEQHPLREISERPGHLLLLKLWQREERLLGVRMAGREARMESQKQQIFHLCCFFLLFHALALTLLFTAPEDGGA

Query:  CRRWWAAGVAVGATSAVMAVLVQARVWAYWKAAGRLQRDRDSNRALLRCVQELRMKGGSFNLNKQPIVGKRMKSSSVEIKWGPLTWCSRNLPAVSLLCSA
        C +WW  GVA+GATS V  ++VQ ++W YWKA+ +LQR++  NRAL RCVQELRMKG  FNL+K+P +G RMKSSSVEIKWGPLT  SRN   + LLC +
Subjt:  CRRWWAAGVAVGATSAVMAVLVQARVWAYWKAAGRLQRDRDSNRALLRCVQELRMKGGSFNLNKQPIVGKRMKSSSVEIKWGPLTWCSRNLPAVSLLCSA

Query:  GAVVAASRFLLCG
        G V  AS+F+LCG
Subjt:  GAVVAASRFLLCG
XP_022965180.1 uncharacterized protein LOC111465114 [Cucurbita maxima]5.79e-8460.85Show/hide
Query:  HVVEIQIPIPAGQEDDENKKLICMAIEQHPLREISERPGHLLLLKLWQREERLLGVRMAGREARMESQKQQIFHLCCFFLLFHALALTLLFTAPEDGGAC
        H+VEI    PA     EN+ ++   IEQHPLR+ISE  GHLLLLKLWQREE L G+R+  RE ++ES KQQIF LCC+F LFHAL+LTLLFT+  D   C
Subjt:  HVVEIQIPIPAGQEDDENKKLICMAIEQHPLREISERPGHLLLLKLWQREERLLGVRMAGREARMESQKQQIFHLCCFFLLFHALALTLLFTAPEDGGAC

Query:  RRWWAAGVAVGATSAVMAVLVQARVWAYWKAAGRLQRDRDSNRALLRCVQELRMKGGSFNLNKQPIVGKRMKSSSVEIKWGPLTWCSRNLPAVSLLCSAG
         +WW  GVA+GATS V  ++VQ ++W YWKA+ +LQR++  NRAL R VQELRMKG  FNL+K+P +G RMKSSSVEIKWGPLTW SRN   + LLC +G
Subjt:  RRWWAAGVAVGATSAVMAVLVQARVWAYWKAAGRLQRDRDSNRALLRCVQELRMKGGSFNLNKQPIVGKRMKSSSVEIKWGPLTWCSRNLPAVSLLCSAG

Query:  AVVAASRFLLCG
         V  AS+F+LCG
Subjt:  AVVAASRFLLCG
XP_023553388.1 uncharacterized protein LOC111810817 [Cucurbita pepo subsp. pepo]1.46e-8662.44Show/hide
Query:  AHVVEIQIPIPAGQEDDENKKLICMAIEQHPLREISERPGHLLLLKLWQREERLLGVRMAGREARMESQKQQIFHLCCFFLLFHALALTLLFTAPEDGGA
        AHVVEI    PA     EN+ ++   IEQHPLR+ISE  GHLLLLKLWQREE L G+R+  RE +MES KQQIF LCC+F LFHAL+LTLLFT+  D   
Subjt:  AHVVEIQIPIPAGQEDDENKKLICMAIEQHPLREISERPGHLLLLKLWQREERLLGVRMAGREARMESQKQQIFHLCCFFLLFHALALTLLFTAPEDGGA

Query:  CRRWWAAGVAVGATSAVMAVLVQARVWAYWKAAGRLQRDRDSNRALLRCVQELRMKGGSFNLNKQPIVGKRMKSSSVEIKWGPLTWCSRNLPAVSLLCSA
        C +WW  GVA+GATS V  ++VQ ++W YWKA+ +LQR++  NRAL RCVQELRMKG  FNL+K+P +G RMKSSSVEIKWGPLTW SRN   + LLC +
Subjt:  CRRWWAAGVAVGATSAVMAVLVQARVWAYWKAAGRLQRDRDSNRALLRCVQELRMKGGSFNLNKQPIVGKRMKSSSVEIKWGPLTWCSRNLPAVSLLCSA

Query:  GAVVAASRFLLCG
        G V  AS+F+LCG
Subjt:  GAVVAASRFLLCG
TrEMBL top hitse value%identityAlignment
A0A0A0L2U7 Uncharacterized protein1.63e-8156.81Show/hide
Query:  AHVVEIQIPIPAGQEDDENKKLICMAIEQHPLREISERPGHLLLLKLWQREERLLGVRMAGREARMESQKQQIFHLCCFFLLFHALALTLLFTAPEDGGA
        AH+VEI +     ++++  + L+   I+ HPLR+ISE  GHLLLLKLWQR+E L G+R+  RE +MES KQQIF LCCFF LFHAL+LTLL+T+  D   
Subjt:  AHVVEIQIPIPAGQEDDENKKLICMAIEQHPLREISERPGHLLLLKLWQREERLLGVRMAGREARMESQKQQIFHLCCFFLLFHALALTLLFTAPEDGGA

Query:  CRRWWAAGVAVGATSAVMAVLVQARVWAYWKAAGRLQRDRDSNRALLRCVQELRMKGGSFNLNKQPIVGKRMKSSSVEIKWGPLTWCSRNLPAVSLLCSA
        C++WW   V +GATS V  ++VQ ++W YWKA G+LQ+++  NRAL RCVQELRMKG  FNL+K+P +G RMKSSSVEIKWGPLTW SRN   +SLL  +
Subjt:  CRRWWAAGVAVGATSAVMAVLVQARVWAYWKAAGRLQRDRDSNRALLRCVQELRMKGGSFNLNKQPIVGKRMKSSSVEIKWGPLTWCSRNLPAVSLLCSA

Query:  GAVVAASRFLLCG
          +   S+F+LCG
Subjt:  GAVVAASRFLLCG
A0A1S3BL81 uncharacterized protein LOC1034910491.72e-8358.69Show/hide
Query:  AHVVEIQIPIPAGQEDDENKKLICMAIEQHPLREISERPGHLLLLKLWQREERLLGVRMAGREARMESQKQQIFHLCCFFLLFHALALTLLFTAPEDGGA
        AH+VEI +     ++++  + L+   I+ HPLR+ISE  GHLLLLKLWQR+E L G+R+  RE +MES KQQIF LCCFF LFHAL+LTLL+T+  D   
Subjt:  AHVVEIQIPIPAGQEDDENKKLICMAIEQHPLREISERPGHLLLLKLWQREERLLGVRMAGREARMESQKQQIFHLCCFFLLFHALALTLLFTAPEDGGA

Query:  CRRWWAAGVAVGATSAVMAVLVQARVWAYWKAAGRLQRDRDSNRALLRCVQELRMKGGSFNLNKQPIVGKRMKSSSVEIKWGPLTWCSRNLPAVSLLCSA
        C++WW   V +GATS V  ++VQ ++W YWKA G+LQR++  NRAL RC QELRMKG  FNL+K+P +G RMKSSSVEIKWGPLTW SRN  A+SLL  +
Subjt:  CRRWWAAGVAVGATSAVMAVLVQARVWAYWKAAGRLQRDRDSNRALLRCVQELRMKGGSFNLNKQPIVGKRMKSSSVEIKWGPLTWCSRNLPAVSLLCSA

Query:  GAVVAASRFLLCG
          V AAS+F+LCG
Subjt:  GAVVAASRFLLCG
A0A6J1EWB5 uncharacterized protein LOC1114387091.97e-8461.5Show/hide
Query:  AHVVEIQIPIPAGQEDDENKKLICMAIEQHPLREISERPGHLLLLKLWQREERLLGVRMAGREARMESQKQQIFHLCCFFLLFHALALTLLFTAPEDGGA
        AHVVEI    PA     EN+ ++   IEQHPLR+ISE  GHLLLLKLWQREE L G+R+  RE ++ES KQQIF LCC+F LFHAL+LTLLFT+  D   
Subjt:  AHVVEIQIPIPAGQEDDENKKLICMAIEQHPLREISERPGHLLLLKLWQREERLLGVRMAGREARMESQKQQIFHLCCFFLLFHALALTLLFTAPEDGGA

Query:  CRRWWAAGVAVGATSAVMAVLVQARVWAYWKAAGRLQRDRDSNRALLRCVQELRMKGGSFNLNKQPIVGKRMKSSSVEIKWGPLTWCSRNLPAVSLLCSA
        C +WW  GVA+GATS V  ++VQ ++W YWKA+ +LQR++  NRAL RCVQELRMKG  FNL+K+P +G RMKSSSVEIKWGPLT  SRN   + LLC +
Subjt:  CRRWWAAGVAVGATSAVMAVLVQARVWAYWKAAGRLQRDRDSNRALLRCVQELRMKGGSFNLNKQPIVGKRMKSSSVEIKWGPLTWCSRNLPAVSLLCSA

Query:  GAVVAASRFLLCG
        G V  AS+F+LCG
Subjt:  GAVVAASRFLLCG
A0A6J1HN07 uncharacterized protein LOC1114651142.80e-8460.85Show/hide
Query:  HVVEIQIPIPAGQEDDENKKLICMAIEQHPLREISERPGHLLLLKLWQREERLLGVRMAGREARMESQKQQIFHLCCFFLLFHALALTLLFTAPEDGGAC
        H+VEI    PA     EN+ ++   IEQHPLR+ISE  GHLLLLKLWQREE L G+R+  RE ++ES KQQIF LCC+F LFHAL+LTLLFT+  D   C
Subjt:  HVVEIQIPIPAGQEDDENKKLICMAIEQHPLREISERPGHLLLLKLWQREERLLGVRMAGREARMESQKQQIFHLCCFFLLFHALALTLLFTAPEDGGAC

Query:  RRWWAAGVAVGATSAVMAVLVQARVWAYWKAAGRLQRDRDSNRALLRCVQELRMKGGSFNLNKQPIVGKRMKSSSVEIKWGPLTWCSRNLPAVSLLCSAG
         +WW  GVA+GATS V  ++VQ ++W YWKA+ +LQR++  NRAL R VQELRMKG  FNL+K+P +G RMKSSSVEIKWGPLTW SRN   + LLC +G
Subjt:  RRWWAAGVAVGATSAVMAVLVQARVWAYWKAAGRLQRDRDSNRALLRCVQELRMKGGSFNLNKQPIVGKRMKSSSVEIKWGPLTWCSRNLPAVSLLCSAG

Query:  AVVAASRFLLCG
         V  AS+F+LCG
Subjt:  AVVAASRFLLCG
V4UTR0 Uncharacterized protein6.49e-7755.71Show/hide
Query:  AHVVEIQIPIPAGQEDDENKKLICM----AIEQHPLREISERPGHLLLLKLWQREERLLGVRMAGREARMESQKQQIFHLCCFFLLFHALALTLLFTA--
        AHVVEI +      E+ + K L CM    AI+ HPL EIS+ PGHLLLLKLWQREE L G R++ +E+RM+S K++IF LCCFFL+FH   LTLLFT+  
Subjt:  AHVVEIQIPIPAGQEDDENKKLICM----AIEQHPLREISERPGHLLLLKLWQREERLLGVRMAGREARMESQKQQIFHLCCFFLLFHALALTLLFTA--

Query:  -PEDGGACRRWWAAGVAVGATSAVMAVLVQARVWAYWKAAGRLQRDRDSNRALLRCVQELRMKGGSFNLNKQPIVGKRMKSSSVEIKWGPLTWCSRNLPA
         P+    CR+WW   +   +TS V   LVQ +++ YWK   +LQR+++ NRAL RC+QELRMKG SF+L+K+P+ GKRMKSSSVEIKW PLTWCS+N+  
Subjt:  -PEDGGACRRWWAAGVAVGATSAVMAVLVQARVWAYWKAAGRLQRDRDSNRALLRCVQELRMKGGSFNLNKQPIVGKRMKSSSVEIKWGPLTWCSRNLPA

Query:  VSLLCSAGAVVAASRFLLC
        + LLC +G V  AS+F+LC
Subjt:  VSLLCSAGAVVAASRFLLC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G12870.1 unknown protein2.1e-1931.55Show/hide
Query:  DDENKKLICMAIEQHPLREISERPGHLLLLKLWQREERLLGVRMAGREARMESQKQQIFHLCCFFLLFHALALTLLFTAPE------DGGACRRWWAAGV
        D      I  A  +HPL +I++ P H LLLK W +EE L+  R++ +E++++S +++I  L  FF LFH+++L LLF A           AC+R W   +
Subjt:  DDENKKLICMAIEQHPLREISERPGHLLLLKLWQREERLLGVRMAGREARMESQKQQIFHLCCFFLLFHALALTLLFTAPE------DGGACRRWWAAGV

Query:  A--VGATSAVMAVLVQARVWAYWKAAGRLQRDRDSNRALLRCVQELRMKGGSFNLNKQPIVGKRMKSSSVEIKWGPL-TWCSRNLPAVSLLCSAGAVVAA
           + +   + AV  ++ V ++ +    L+R+++  + L +CV+EL+ KG  F+L K+    +R KS  VE K  P+  W +R+   +     +  V+A 
Subjt:  A--VGATSAVMAVLVQARVWAYWKAAGRLQRDRDSNRALLRCVQELRMKGGSFNLNKQPIVGKRMKSSSVEIKWGPL-TWCSRNLPAVSLLCSAGAVVAA

Query:  SRFLLC
         R +LC
Subjt:  SRFLLC
AT5G56120.1 unknown protein5.8e-5447.83Show/hide
Query:  AHVVEIQIPIPAGQEDDENKKLICMA---------IEQHPLREISERPGHLLLLKLWQREERLLGVRMAGREARMESQKQQIFHLCCFFLLFHALALTLL
        +HVVEI +     +E  + ++L+ ++         I+QHPL EISE PGHLLLLKLWQREE L   R+  +E+R+ES K++IF LCCFFL+FH    TL+
Subjt:  AHVVEIQIPIPAGQEDDENKKLICMA---------IEQHPLREISERPGHLLLLKLWQREERLLGVRMAGREARMESQKQQIFHLCCFFLLFHALALTLL

Query:  FTAP--------EDGGACRRWWAAGVAVGATSAVMAVLVQARVWAYWKAAGRLQRDRDSNRALLRCVQELRMKGGSFNLNKQPIVGKRMKSSSVEIKWGP
        +++         +    C++WW       ATS V+  LVQA+++ +WK    + R+R+ NR L RCV ELRMKG SF+L+K+P+ GKRMKSSSVEIKW P
Subjt:  FTAP--------EDGGACRRWWAAGVAVGATSAVMAVLVQARVWAYWKAAGRLQRDRDSNRALLRCVQELRMKGGSFNLNKQPIVGKRMKSSSVEIKWGP

Query:  LTWCSRNLPAVSLLCSAGAVVAASRFLLCG
        +TW S+ L  + LLCSAG     S+F+LCG
Subjt:  LTWCSRNLPAVSLLCSAGAVVAASRFLLCG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCCCACGTCGTGGAAATCCAAATTCCAATCCCAGCGGGGCAAGAAGATGACGAGAATAAGAAGCTAATTTGTATGGCCATCGAACAGCACCCGTTAAGGGAAATCTCCGA
GAGGCCAGGGCATCTGCTCCTGCTGAAGCTATGGCAGCGAGAGGAGCGTCTGTTGGGGGTCCGAATGGCGGGCCGGGAAGCCAGAATGGAGTCTCAGAAGCAGCAGATCT
TCCACCTCTGCTGCTTCTTCCTGCTCTTCCACGCCCTCGCCCTCACGCTCCTGTTCACGGCCCCGGAAGACGGCGGAGCGTGCAGGCGGTGGTGGGCTGCGGGGGTGGCG
GTGGGGGCGACGTCGGCCGTGATGGCGGTGCTGGTGCAGGCGCGGGTGTGGGCGTACTGGAAGGCGGCGGGGCGGCTGCAGAGGGACAGAGACTCCAACAGGGCTCTCCT
CAGATGCGTGCAGGAGCTGAGGATGAAAGGAGGCTCCTTCAATTTGAACAAACAGCCCATCGTCGGGAAGAGGATGAAGAGCTCCAGCGTGGAGATTAAGTGGGGCCCGC
TCACTTGGTGCTCCAGGAATTTGCCTGCGGTTTCTCTGCTCTGCTCTGCTGGGGCTGTTGTTGCGGCTTCCAGGTTCCTCCTCTGTGGA
mRNA sequenceShow/hide mRNA sequence
GCCCACGTCGTGGAAATCCAAATTCCAATCCCAGCGGGGCAAGAAGATGACGAGAATAAGAAGCTAATTTGTATGGCCATCGAACAGCACCCGTTAAGGGAAATCTCCGA
GAGGCCAGGGCATCTGCTCCTGCTGAAGCTATGGCAGCGAGAGGAGCGTCTGTTGGGGGTCCGAATGGCGGGCCGGGAAGCCAGAATGGAGTCTCAGAAGCAGCAGATCT
TCCACCTCTGCTGCTTCTTCCTGCTCTTCCACGCCCTCGCCCTCACGCTCCTGTTCACGGCCCCGGAAGACGGCGGAGCGTGCAGGCGGTGGTGGGCTGCGGGGGTGGCG
GTGGGGGCGACGTCGGCCGTGATGGCGGTGCTGGTGCAGGCGCGGGTGTGGGCGTACTGGAAGGCGGCGGGGCGGCTGCAGAGGGACAGAGACTCCAACAGGGCTCTCCT
CAGATGCGTGCAGGAGCTGAGGATGAAAGGAGGCTCCTTCAATTTGAACAAACAGCCCATCGTCGGGAAGAGGATGAAGAGCTCCAGCGTGGAGATTAAGTGGGGCCCGC
TCACTTGGTGCTCCAGGAATTTGCCTGCGGTTTCTCTGCTCTGCTCTGCTGGGGCTGTTGTTGCGGCTTCCAGGTTCCTCCTCTGTGGA
Protein sequenceShow/hide protein sequence
AHVVEIQIPIPAGQEDDENKKLICMAIEQHPLREISERPGHLLLLKLWQREERLLGVRMAGREARMESQKQQIFHLCCFFLLFHALALTLLFTAPEDGGACRRWWAAGVA
VGATSAVMAVLVQARVWAYWKAAGRLQRDRDSNRALLRCVQELRMKGGSFNLNKQPIVGKRMKSSSVEIKWGPLTWCSRNLPAVSLLCSAGAVVAASRFLLCG