; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC00g0307 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC00g0307
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionA2L_zn_ribbon domain-containing protein
Genome locationscaffold113:181559..182944
RNA-Seq ExpressionMC00g0307
SyntenyMC00g0307
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596745.1 hypothetical protein SDJN03_09925, partial [Cucurbita argyrosperma subsp. sororia]1.01e-4964.44Show/hide
Query:  MEALAPISNSLFRFT-------KPLNSIP--------NRRPKT-TIAAINDA--ASQQQADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCE
        MEAL PIS S FRF        +P++S P        N+R +T T AAI+ A  A+   ADP+Q++ITWQI VGAIAGVTPFVVAGIEF+KRIVAQ+RC+
Subjt:  MEALAPISNSLFRFT-------KPLNSIP--------NRRPKT-TIAAINDA--ASQQQADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCE

Query:  ECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG
        ECGGSGLVLM+ DYFRCP+CGGFLPWQSW+RFF G
Subjt:  ECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG

XP_022154992.1 uncharacterized protein LOC111022135 [Momordica charantia]1.15e-81100Show/hide
Query:  MEALAPISNSLFRFTKPLNSIPNRRPKTTIAAINDAASQQQADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCP
        MEALAPISNSLFRFTKPLNSIPNRRPKTTIAAINDAASQQQADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCP
Subjt:  MEALAPISNSLFRFTKPLNSIPNRRPKTTIAAINDAASQQQADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCP

Query:  QCGGFLPWQSWKRFFWG
        QCGGFLPWQSWKRFFWG
Subjt:  QCGGFLPWQSWKRFFWG

XP_022935718.1 uncharacterized protein LOC111442262 [Cucurbita moschata]3.96e-4963.43Show/hide
Query:  MEALAPISNSLFRFTKPLNSIP---------------NRRPKT-TIAAINDAA-SQQQADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEE
        MEAL PIS S FRF    N+ P               N+R +T T AAI+ A+ +   ADP+Q++ITWQI VGAIAGVTPFVVAGIEF+KRIVAQ+RC+E
Subjt:  MEALAPISNSLFRFTKPLNSIP---------------NRRPKT-TIAAINDAA-SQQQADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEE

Query:  CGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG
        CGGSGLVLM+ DYFRCP+CGGFLPWQSW+RFF G
Subjt:  CGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG

XP_023005598.1 uncharacterized protein LOC111498537 [Cucurbita maxima]3.96e-4963.43Show/hide
Query:  MEALAPISNSLFRFTKPLNSIP---------------NRRPKT-TIAAINDAA-SQQQADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEE
        MEAL PIS S FRF    N+ P               N+R +T T AAI+ A+ +   ADP+Q++ITWQI VGAIAGVTPFVVAGIEF+KRIVAQ+RC+E
Subjt:  MEALAPISNSLFRFTKPLNSIP---------------NRRPKT-TIAAINDAA-SQQQADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEE

Query:  CGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG
        CGGSGLVLM+ DYFRCP+CGGFLPWQSW+RFF G
Subjt:  CGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG

XP_038903334.1 uncharacterized protein LOC120089955 [Benincasa hispida]5.18e-5069.29Show/hide
Query:  MEALA--PISNSLFRF----TKPL----NSIPNRRPKTTIAAINDAASQQQADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLV
        MEAL   PISN LF F    T PL    NSI NRR   T AAI+ A+    AD  Q++ITWQI VGAIAGVTPFVVAGIEF+KRI+AQ+RC+ECGGSGLV
Subjt:  MEALA--PISNSLFRF----TKPL----NSIPNRRPKTTIAAINDAASQQQADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLV

Query:  LMEDDYFRCPQCGGFLPWQSWKRFFWG
        L +DDYFRCP+CGGFLPWQSW+RFFWG
Subjt:  LMEDDYFRCPQCGGFLPWQSWKRFFWG

TrEMBL top hitse value%identityAlignment
A0A0A0L7H1 Uncharacterized protein2.76e-4775.76Show/hide
Query:  NSIPNRRPKTTIAAINDAASQQQADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG
        NSI NRR     AAI D AS   AD +Q+QITWQI VGAIAGVTPFVVAGIEF+KRI  Q+RC+ECGGSGLVL +DDYFRCP+CGGFLPWQSW+RFFWG
Subjt:  NSIPNRRPKTTIAAINDAASQQQADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG

A0A1S3BLU9 uncharacterized protein LOC1034910511.01e-4869.11Show/hide
Query:  MEALAPISNSLF-----RFTKPL-NSIPNRRPKTTIAAINDAASQQQADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMED
        MEAL  ISN L      R +KP  NS+ NRR     AAI D AS   AD +Q++ITWQI VGAIAGVTPFVVAGIEF+KRI+AQ+RC+ECGGSGLVL +D
Subjt:  MEALAPISNSLF-----RFTKPL-NSIPNRRPKTTIAAINDAASQQQADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMED

Query:  DYFRCPQCGGFLPWQSWKRFFWG
        DYFRCP CGGFLPWQSW+RFFWG
Subjt:  DYFRCPQCGGFLPWQSWKRFFWG

A0A6J1DN65 uncharacterized protein LOC1110221355.58e-82100Show/hide
Query:  MEALAPISNSLFRFTKPLNSIPNRRPKTTIAAINDAASQQQADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCP
        MEALAPISNSLFRFTKPLNSIPNRRPKTTIAAINDAASQQQADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCP
Subjt:  MEALAPISNSLFRFTKPLNSIPNRRPKTTIAAINDAASQQQADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCP

Query:  QCGGFLPWQSWKRFFWG
        QCGGFLPWQSWKRFFWG
Subjt:  QCGGFLPWQSWKRFFWG

A0A6J1FBA7 uncharacterized protein LOC1114422621.92e-4963.43Show/hide
Query:  MEALAPISNSLFRFTKPLNSIP---------------NRRPKT-TIAAINDAA-SQQQADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEE
        MEAL PIS S FRF    N+ P               N+R +T T AAI+ A+ +   ADP+Q++ITWQI VGAIAGVTPFVVAGIEF+KRIVAQ+RC+E
Subjt:  MEALAPISNSLFRFTKPLNSIP---------------NRRPKT-TIAAINDAA-SQQQADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEE

Query:  CGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG
        CGGSGLVLM+ DYFRCP+CGGFLPWQSW+RFF G
Subjt:  CGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG

A0A6J1L2M2 uncharacterized protein LOC1114985371.92e-4963.43Show/hide
Query:  MEALAPISNSLFRFTKPLNSIP---------------NRRPKT-TIAAINDAA-SQQQADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEE
        MEAL PIS S FRF    N+ P               N+R +T T AAI+ A+ +   ADP+Q++ITWQI VGAIAGVTPFVVAGIEF+KRIVAQ+RC+E
Subjt:  MEALAPISNSLFRFTKPLNSIP---------------NRRPKT-TIAAINDAA-SQQQADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEE

Query:  CGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG
        CGGSGLVLM+ DYFRCP+CGGFLPWQSW+RFF G
Subjt:  CGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G55570.1 unknown protein6.1e-3162.24Show/hide
Query:  SIPNRRPKTTIAAINDAASQQQADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG
        ++ NRR KTT +A+++ A    A+  + +ITWQI VG IAG+ PFVVAG+EF+KRI+AQ+RCEECGG+GLV  +  YFRCP+CGGFLPWQSW+RFF G
Subjt:  SIPNRRPKTTIAAINDAASQQQADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACGACGTGTCGCATCTGAGAACGGCTCATTTAATTGCCCCTCCCTTCTCCAAACTCCAAACTCCAAACTCCAAATTTCAGCAATGGAAGCTTTAGCCCCAATCTC
CAACTCTCTCTTCCGATTCACAAAACCTTTAAATTCGATCCCAAATCGGAGACCAAAAACCACGATTGCCGCCATAAACGACGCCGCTTCGCAGCAGCAAGCTGATCCCT
CCCAACTCCAGATTACTTGGCAAATAGCCGTCGGCGCCATTGCTGGAGTAACCCCGTTTGTGGTGGCCGGAATTGAGTTCACCAAGAGAATTGTGGCACAGCAAAGATGT
GAAGAATGTGGAGGTTCGGGGCTTGTTCTTATGGAGGACGACTACTTCCGTTGCCCACAATGCGGTGGGTTTTTGCCTTGGCAGTCATGGAAGCGATTCTTTTGGGGCTA
A
mRNA sequenceShow/hide mRNA sequence
GAACATTCTCGTTCGTGACGAACAAGCCATGGTAAATGAACTTAAAATTTTTTATCAATGAACTCAAAGACCATGAGAAGCGAGATCTAGTTAGAAACCGACCACCCACC
TTGAGTTAAGGATGCTACCACCAAAGATCCACTTTTCCTTTAATTTCTTTTGTTTTGCTTTGAAAACTCTTCAATAACCTAAAAGAATAGGTAAAAAAGAATTAAAGATA
TTTCACATTTTGATGAAGTGAGTGGTGAACATGGGACGACGTGTCGCATCTGAGAACGGCTCATTTAATTGCCCCTCCCTTCTCCAAACTCCAAACTCCAAACTCCAAAT
TTCAGCAATGGAAGCTTTAGCCCCAATCTCCAACTCTCTCTTCCGATTCACAAAACCTTTAAATTCGATCCCAAATCGGAGACCAAAAACCACGATTGCCGCCATAAACG
ACGCCGCTTCGCAGCAGCAAGCTGATCCCTCCCAACTCCAGATTACTTGGCAAATAGCCGTCGGCGCCATTGCTGGAGTAACCCCGTTTGTGGTGGCCGGAATTGAGTTC
ACCAAGAGAATTGTGGCACAGCAAAGATGTGAAGAATGTGGAGGTTCGGGGCTTGTTCTTATGGAGGACGACTACTTCCGTTGCCCACAATGCGGTGGGTTTTTGCCTTG
GCAGTCATGGAAGCGATTCTTTTGGGGCTAAACATCTAAAAAAACAACAAAAAGCACTTCATTTAAGCACTTCTATTCCTTGATTGTATTACATGTAATTATGGTACTAA
AGATGTGTTTACATAAATTAAATGCTCAATCAAATGGAATGGTAACATATTGCTCATTGGTTTGTAATTGTTACAGCCCTAAACTGTGAATATCCTACCACTTTTAAACT
TATGGGTTTACAGAGTGTTTAATATGATATAAGAATAGGAGGTGATCCAATTCTATAATGTTATTTTTTTTTGAATTAATATTCATATTCAATTTTGAG
Protein sequenceShow/hide protein sequence
MGRRVASENGSFNCPSLLQTPNSKLQISAMEALAPISNSLFRFTKPLNSIPNRRPKTTIAAINDAASQQQADPSQLQITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRC
EECGGSGLVLMEDDYFRCPQCGGFLPWQSWKRFFWG