CuGenDBv2

Gene ID	MC00g0317
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	tRNA_int_end_N2 domain-containing protein
Genome location	scaffold109:14477..17627
RNA-Seq Expression	MC00g0317
Synteny	MC00g0317
Gene Ontology terms	GO:0000379 - tRNA-type intron splice site recognition and cleavage (biological process) GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process) GO:0000214 - tRNA-intron endonuclease complex (cellular component) GO:0004519 - endonuclease activity (molecular function)
InterPro domains	IPR024336 - tRNA-splicing endonuclease, subunit Sen54, N-terminal IPR024337 - tRNA-splicing endonuclease, subunit Sen54

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7028441.1 tRNA-splicing endonuclease subunit Sen54 [Cucurbita argyrosperma subsp. argyrosperma]

2.04e-167

83.4

Show/hide

Query:  MEATDWESSSGGASGDDEIYEQDVEDEEECLCASGNMRKLQFRKHASTARWNDQMGMAEVLENRGSLWTTTGIVRCGKIYCSFEETLFLMEVGALHLLDH
        MEATDWE SSGGAS DD+ +EQD+++EEECLC+SGNMRKLQFRKHASTARWND+MGMAEVLEN+GSLWTT+GIVRCGKIYCS EETLFL+EVGALHLLDH
Subjt:  MEATDWESSSGGASGDDEIYEQDVEDEEECLCASGNMRKLQFRKHASTARWNDQMGMAEVLENRGSLWTTTGIVRCGKIYCSFEETLFLMEVGALHLLDH

Query:  DNSSLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGSDISPQSSIENEGAWDLESKDERSISELLSSIQLDQVMPIFDVFLP
        DNSSLSLKDVYKKVAEGK+ C+WEQFEVYRHLKSLG+IVGKHKVPWSVKG RNG DIS QSSIEN+G+ D  S+DE+SI EL+ +IQL++V PIFDV+LP
Subjt:  DNSSLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGSDISPQSSIENEGAWDLESKDERSISELLSSIQLDQVMPIFDVFLP

Query:  HSKFRKSSPGDPNFMVCLTRGYPPPKKDIEFLERTSRGIHIKYCHVEHGRVCFFSFDKLELPVLP
        HSKFRKSSPGDPNFMVCLTRGYPPPK DIE +ER S GI +KYCHVEHGRVCFFSFDK+ELPVLP
Subjt:  HSKFRKSSPGDPNFMVCLTRGYPPPKKDIEFLERTSRGIHIKYCHVEHGRVCFFSFDKLELPVLP

XP_022156818.1 uncharacterized protein LOC111023660 [Momordica charantia]

8.07e-199

100

Show/hide

Query:  MEATDWESSSGGASGDDEIYEQDVEDEEECLCASGNMRKLQFRKHASTARWNDQMGMAEVLENRGSLWTTTGIVRCGKIYCSFEETLFLMEVGALHLLDH
        MEATDWESSSGGASGDDEIYEQDVEDEEECLCASGNMRKLQFRKHASTARWNDQMGMAEVLENRGSLWTTTGIVRCGKIYCSFEETLFLMEVGALHLLDH
Subjt:  MEATDWESSSGGASGDDEIYEQDVEDEEECLCASGNMRKLQFRKHASTARWNDQMGMAEVLENRGSLWTTTGIVRCGKIYCSFEETLFLMEVGALHLLDH

Query:  DNSSLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGSDISPQSSIENEGAWDLESKDERSISELLSSIQLDQVMPIFDVFLP
        DNSSLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGSDISPQSSIENEGAWDLESKDERSISELLSSIQLDQVMPIFDVFLP
Subjt:  DNSSLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGSDISPQSSIENEGAWDLESKDERSISELLSSIQLDQVMPIFDVFLP

Query:  HSKFRKSSPGDPNFMVCLTRGYPPPKKDIEFLERTSRGIHIKYCHVEHGRVCFFSFDKLELPVLP
        HSKFRKSSPGDPNFMVCLTRGYPPPKKDIEFLERTSRGIHIKYCHVEHGRVCFFSFDKLELPVLP
Subjt:  HSKFRKSSPGDPNFMVCLTRGYPPPKKDIEFLERTSRGIHIKYCHVEHGRVCFFSFDKLELPVLP

XP_022940787.1 tRNA-splicing endonuclease subunit Sen54 [Cucurbita moschata]

5.86e-167

83.02

Show/hide

Query:  MEATDWESSSGGASGDDEIYEQDVEDEEECLCASGNMRKLQFRKHASTARWNDQMGMAEVLENRGSLWTTTGIVRCGKIYCSFEETLFLMEVGALHLLDH
        MEATDWE SSGGAS DD+ +EQD+++EEECLC+SGNMRKLQFRKHASTARWND+MGMAEVLEN+GSLWTT+GIVRCGKIYCS EETLFL+EVGALHLLDH
Subjt:  MEATDWESSSGGASGDDEIYEQDVEDEEECLCASGNMRKLQFRKHASTARWNDQMGMAEVLENRGSLWTTTGIVRCGKIYCSFEETLFLMEVGALHLLDH

Query:  DNSSLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGSDISPQSSIENEGAWDLESKDERSISELLSSIQLDQVMPIFDVFLP
        DNSSLSLKDVYKKVAEGK+ C+WEQFEVYRHLKSLG+IVGKHKVPWSVKG +NG DIS QSSIEN+G+ D  S+DE+SI EL+ +IQL++V PIFDV+LP
Subjt:  DNSSLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGSDISPQSSIENEGAWDLESKDERSISELLSSIQLDQVMPIFDVFLP

Query:  HSKFRKSSPGDPNFMVCLTRGYPPPKKDIEFLERTSRGIHIKYCHVEHGRVCFFSFDKLELPVLP
        HSKFRKSSPGDPNFMVCLTRGYPPPK DIE +ER S GI +KYCHVEHGRVCFFSFDK+ELPVLP
Subjt:  HSKFRKSSPGDPNFMVCLTRGYPPPKKDIEFLERTSRGIHIKYCHVEHGRVCFFSFDKLELPVLP

XP_023538818.1 tRNA-splicing endonuclease subunit Sen54-like [Cucurbita pepo subsp. pepo]

8.32e-167

83.02

Show/hide

Query:  MEATDWESSSGGASGDDEIYEQDVEDEEECLCASGNMRKLQFRKHASTARWNDQMGMAEVLENRGSLWTTTGIVRCGKIYCSFEETLFLMEVGALHLLDH
        MEATDWE SSGGAS DD+ +EQD+++EEECLC+SGNMRKLQFRKHASTARWND+MGMAEVLEN+GSLWTT+GIVRCGKIYCS EETLFL+EVGALHLLDH
Subjt:  MEATDWESSSGGASGDDEIYEQDVEDEEECLCASGNMRKLQFRKHASTARWNDQMGMAEVLENRGSLWTTTGIVRCGKIYCSFEETLFLMEVGALHLLDH

Query:  DNSSLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGSDISPQSSIENEGAWDLESKDERSISELLSSIQLDQVMPIFDVFLP
        DNSSLSLKDVYKKVAEGK+ C+WEQFEVYRHLKSLG+IVGKHKVPWSVKG RNG DIS +SSIEN+G+ D  S+DE+SI EL+ +IQL++V PIFDV+LP
Subjt:  DNSSLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGSDISPQSSIENEGAWDLESKDERSISELLSSIQLDQVMPIFDVFLP

Query:  HSKFRKSSPGDPNFMVCLTRGYPPPKKDIEFLERTSRGIHIKYCHVEHGRVCFFSFDKLELPVLP
        HSKFRKSSPGDPNFMVCLTRGYPPPK DIE +ER S GI +KYCHVEHGRVCFFSFDK+ELPVLP
Subjt:  HSKFRKSSPGDPNFMVCLTRGYPPPKKDIEFLERTSRGIHIKYCHVEHGRVCFFSFDKLELPVLP

XP_038883355.1 uncharacterized protein LOC120074337 [Benincasa hispida]

7.13e-168

84.15

Show/hide

Query:  MEATDWESSSGGASGDDEIYEQDVEDEEECLCASGNMRKLQFRKHASTARWNDQMGMAEVLENRGSLWTTTGIVRCGKIYCSFEETLFLMEVGALHLLDH
        MEA DWESSSGGASGD++ YE+D+ +EEECLCASG +RKLQFRKHASTARWND+MGMAEVLEN+GSLWTTTGIVRCGKIYCS EETLFL+EVGALHLLDH
Subjt:  MEATDWESSSGGASGDDEIYEQDVEDEEECLCASGNMRKLQFRKHASTARWNDQMGMAEVLENRGSLWTTTGIVRCGKIYCSFEETLFLMEVGALHLLDH

Query:  DNSSLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGSDISPQSSIENEGAWDLESKDERSISELLSSIQLDQVMPIFDVFLP
        DNSSLSL+DVYKK+AEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWS+K VR+GS+IS  SSIEN+GA D++S+DERSISELL  IQL++VMPIFDVFLP
Subjt:  DNSSLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGSDISPQSSIENEGAWDLESKDERSISELLSSIQLDQVMPIFDVFLP

Query:  HSKFRKSSPGDPNFMVCLTRGYPPPKKDIEFLERTSRGIHIKYCHVEHGRVCFFSFDKLELPVLP
        H+KFRKSSPGDPNFMV LTRGYPP KKD+E L RTSRGI +KYCHVEHGRVCFFSFD +ELP+LP
Subjt:  HSKFRKSSPGDPNFMVCLTRGYPPPKKDIEFLERTSRGIHIKYCHVEHGRVCFFSFDKLELPVLP

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DRN3 uncharacterized protein LOC111023660

3.91e-199

100

Show/hide

Query:  MEATDWESSSGGASGDDEIYEQDVEDEEECLCASGNMRKLQFRKHASTARWNDQMGMAEVLENRGSLWTTTGIVRCGKIYCSFEETLFLMEVGALHLLDH
        MEATDWESSSGGASGDDEIYEQDVEDEEECLCASGNMRKLQFRKHASTARWNDQMGMAEVLENRGSLWTTTGIVRCGKIYCSFEETLFLMEVGALHLLDH
Subjt:  MEATDWESSSGGASGDDEIYEQDVEDEEECLCASGNMRKLQFRKHASTARWNDQMGMAEVLENRGSLWTTTGIVRCGKIYCSFEETLFLMEVGALHLLDH

Query:  DNSSLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGSDISPQSSIENEGAWDLESKDERSISELLSSIQLDQVMPIFDVFLP
        DNSSLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGSDISPQSSIENEGAWDLESKDERSISELLSSIQLDQVMPIFDVFLP
Subjt:  DNSSLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGSDISPQSSIENEGAWDLESKDERSISELLSSIQLDQVMPIFDVFLP

Query:  HSKFRKSSPGDPNFMVCLTRGYPPPKKDIEFLERTSRGIHIKYCHVEHGRVCFFSFDKLELPVLP
        HSKFRKSSPGDPNFMVCLTRGYPPPKKDIEFLERTSRGIHIKYCHVEHGRVCFFSFDKLELPVLP
Subjt:  HSKFRKSSPGDPNFMVCLTRGYPPPKKDIEFLERTSRGIHIKYCHVEHGRVCFFSFDKLELPVLP

A0A6J1FKK4 tRNA-splicing endonuclease subunit Sen54

2.84e-167

83.02

Show/hide

Query:  MEATDWESSSGGASGDDEIYEQDVEDEEECLCASGNMRKLQFRKHASTARWNDQMGMAEVLENRGSLWTTTGIVRCGKIYCSFEETLFLMEVGALHLLDH
        MEATDWE SSGGAS DD+ +EQD+++EEECLC+SGNMRKLQFRKHASTARWND+MGMAEVLEN+GSLWTT+GIVRCGKIYCS EETLFL+EVGALHLLDH
Subjt:  MEATDWESSSGGASGDDEIYEQDVEDEEECLCASGNMRKLQFRKHASTARWNDQMGMAEVLENRGSLWTTTGIVRCGKIYCSFEETLFLMEVGALHLLDH

Query:  DNSSLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGSDISPQSSIENEGAWDLESKDERSISELLSSIQLDQVMPIFDVFLP
        DNSSLSLKDVYKKVAEGK+ C+WEQFEVYRHLKSLG+IVGKHKVPWSVKG +NG DIS QSSIEN+G+ D  S+DE+SI EL+ +IQL++V PIFDV+LP
Subjt:  DNSSLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGSDISPQSSIENEGAWDLESKDERSISELLSSIQLDQVMPIFDVFLP

Query:  HSKFRKSSPGDPNFMVCLTRGYPPPKKDIEFLERTSRGIHIKYCHVEHGRVCFFSFDKLELPVLP
        HSKFRKSSPGDPNFMVCLTRGYPPPK DIE +ER S GI +KYCHVEHGRVCFFSFDK+ELPVLP
Subjt:  HSKFRKSSPGDPNFMVCLTRGYPPPKKDIEFLERTSRGIHIKYCHVEHGRVCFFSFDKLELPVLP

A0A6J1I794 tRNA-splicing endonuclease subunit Sen54 isoform X1

2.24e-165

82.26

Show/hide

Query:  MEATDWESSSGGASGDDEIYEQDVEDEEECLCASGNMRKLQFRKHASTARWNDQMGMAEVLENRGSLWTTTGIVRCGKIYCSFEETLFLMEVGALHLLDH
        MEATDWE SSGGAS DD+ +EQD+++EEECL +SGNMRKLQFRKHASTARWND+MGMAEVLEN+GSLWTT+GIVRCGKIYCS EETLFL+EVGALHLLDH
Subjt:  MEATDWESSSGGASGDDEIYEQDVEDEEECLCASGNMRKLQFRKHASTARWNDQMGMAEVLENRGSLWTTTGIVRCGKIYCSFEETLFLMEVGALHLLDH

Query:  DNSSLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGSDISPQSSIENEGAWDLESKDERSISELLSSIQLDQVMPIFDVFLP
        DNSSLSLKDVYKKVAEGK+ C+WEQFEVYRHLKSLG+IVGKHKVPWSVKG RNG DIS +SSIEN+G+ D ES+DE+SI ELL+++QL+++ PIFDV+LP
Subjt:  DNSSLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGSDISPQSSIENEGAWDLESKDERSISELLSSIQLDQVMPIFDVFLP

Query:  HSKFRKSSPGDPNFMVCLTRGYPPPKKDIEFLERTSRGIHIKYCHVEHGRVCFFSFDKLELPVLP
        HSKFRKSSPGDPNFMVCLTRGYPPPK DIE +ER S GI +KYCHVEHGRVCFFSFDK++LPVLP
Subjt:  HSKFRKSSPGDPNFMVCLTRGYPPPKKDIEFLERTSRGIHIKYCHVEHGRVCFFSFDKLELPVLP

A0A6J1I8D9 tRNA-splicing endonuclease subunit Sen54 isoform X3

1.35e-165

82.26

Show/hide

Query:  MEATDWESSSGGASGDDEIYEQDVEDEEECLCASGNMRKLQFRKHASTARWNDQMGMAEVLENRGSLWTTTGIVRCGKIYCSFEETLFLMEVGALHLLDH
        MEATDWE SSGGAS DD+ +EQD+++EEECL +SGNMRKLQFRKHASTARWND+MGMAEVLEN+GSLWTT+GIVRCGKIYCS EETLFL+EVGALHLLDH
Subjt:  MEATDWESSSGGASGDDEIYEQDVEDEEECLCASGNMRKLQFRKHASTARWNDQMGMAEVLENRGSLWTTTGIVRCGKIYCSFEETLFLMEVGALHLLDH

Query:  DNSSLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGSDISPQSSIENEGAWDLESKDERSISELLSSIQLDQVMPIFDVFLP
        DNSSLSLKDVYKKVAEGK+ C+WEQFEVYRHLKSLG+IVGKHKVPWSVKG RNG DIS +SSIEN+G+ D ES+DE+SI ELL+++QL+++ PIFDV+LP
Subjt:  DNSSLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGSDISPQSSIENEGAWDLESKDERSISELLSSIQLDQVMPIFDVFLP

Query:  HSKFRKSSPGDPNFMVCLTRGYPPPKKDIEFLERTSRGIHIKYCHVEHGRVCFFSFDKLELPVLP
        HSKFRKSSPGDPNFMVCLTRGYPPPK DIE +ER S GI +KYCHVEHGRVCFFSFDK++LPVLP
Subjt:  HSKFRKSSPGDPNFMVCLTRGYPPPKKDIEFLERTSRGIHIKYCHVEHGRVCFFSFDKLELPVLP

A0A6J1ICR8 tRNA-splicing endonuclease subunit Sen54 isoform X2

1.56e-165

82.26

Show/hide

Query:  MEATDWESSSGGASGDDEIYEQDVEDEEECLCASGNMRKLQFRKHASTARWNDQMGMAEVLENRGSLWTTTGIVRCGKIYCSFEETLFLMEVGALHLLDH
        MEATDWE SSGGAS DD+ +EQD+++EEECL +SGNMRKLQFRKHASTARWND+MGMAEVLEN+GSLWTT+GIVRCGKIYCS EETLFL+EVGALHLLDH
Subjt:  MEATDWESSSGGASGDDEIYEQDVEDEEECLCASGNMRKLQFRKHASTARWNDQMGMAEVLENRGSLWTTTGIVRCGKIYCSFEETLFLMEVGALHLLDH

Query:  DNSSLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGSDISPQSSIENEGAWDLESKDERSISELLSSIQLDQVMPIFDVFLP
        DNSSLSLKDVYKKVAEGK+ C+WEQFEVYRHLKSLG+IVGKHKVPWSVKG RNG DIS +SSIEN+G+ D ES+DE+SI ELL+++QL+++ PIFDV+LP
Subjt:  DNSSLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGSDISPQSSIENEGAWDLESKDERSISELLSSIQLDQVMPIFDVFLP

Query:  HSKFRKSSPGDPNFMVCLTRGYPPPKKDIEFLERTSRGIHIKYCHVEHGRVCFFSFDKLELPVLP
        HSKFRKSSPGDPNFMVCLTRGYPPPK DIE +ER S GI +KYCHVEHGRVCFFSFDK++LPVLP
Subjt:  HSKFRKSSPGDPNFMVCLTRGYPPPKKDIEFLERTSRGIHIKYCHVEHGRVCFFSFDKLELPVLP

SwissProt top hits

e value

%identity

Alignment

O74908 Probable tRNA-splicing endonuclease subunit sen54

1.2e-05

34.29

Show/hide

Query:  NMRKLQFRKHASTARWNDQMGMAEVLENRGSLWTTTGIVRC-GKIYCSFEETLFLMEVGALHLLDHDNSSLSLKDVYKKVAEGKNGCLWEQFEVYRHLKS
        ++ +L   KHA  A WN Q GM+ V +  G L+ T G      +++   EETL+L+E G++     +   +SL+ VY   +    G L E + VY HL+ 
Subjt:  NMRKLQFRKHASTARWNDQMGMAEVLENRGSLWTTTGIVRC-GKIYCSFEETLFLMEVGALHLLDHDNSSLSLKDVYKKVAEGKNGCLWEQFEVYRHLKS

Query:  LGFIV
         GF V
Subjt:  LGFIV

Q74ZJ5 tRNA-splicing endonuclease subunit SEN54

1.3e-04

31.37

Show/hide

Query:  ARWNDQMGMAEVLENRGSLWTTTGIV-RCGKIYCSFEETLFLMEVGAL----------HLLDHDNSSLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGF
        A W ++  MA +   RGS   T G V + G+ +    E ++L+E G +             +H++  LS++DVY   +  +     ++F VY HLK LGF
Subjt:  ARWNDQMGMAEVLENRGSLWTTTGIV-RCGKIYCSFEETLFLMEVGAL----------HLLDHDNSSLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGF

Query:  IV
        IV
Subjt:  IV

Arabidopsis top hits

e value

%identity

Alignment

AT3G02370.1 unknown protein

2.2e-42

Show/hide

Query:  MAEVLENRGSLWTTTGIVRCGKIYCSFEETLFLMEVGALHLL-DHDNSSLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGS
        MAEV   RG LWTTTGI+R GK YC  EE L+L E+G L LL D D+  +SLKD+Y ++AEGK GC WE +EVYR+LK LG+I+G+H VPW+ K   N  
Subjt:  MAEVLENRGSLWTTTGIVRCGKIYCSFEETLFLMEVGALHLL-DHDNSSLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGS

Query:  DISPQSSIENEGAWDLESKDERSISELLSSIQLDQVMPIFDVFLPHSKFRKSSPGDPNFMVCLT
          +P    E+  A +   +D  S+++LLS + +    P+FDV+LP+S+F+KSSPG+P+F+ C +
Subjt:  DISPQSSIENEGAWDLESKDERSISELLSSIQLDQVMPIFDVFLPHSKFRKSSPGDPNFMVCLT

AT3G02370.2 unknown protein

6.1e-45

49.14

Show/hide

Query:  MAEVLENRGSLWTTTGIVRCGKIYCSFEETLFLMEVGALHLL-DHDNSSLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGS
        MAEV   RG LWTTTGI+R GK YC  EE L+L E+G L LL D D+  +SLKD+Y ++AEGK GC WE +EVYR+LK LG+I+G+H VPW+ K   N  
Subjt:  MAEVLENRGSLWTTTGIVRCGKIYCSFEETLFLMEVGALHLL-DHDNSSLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGS

Query:  DISPQSSIENEGAWDLESKDERSISELLSSIQLDQVMPIFDVFLPHSKFRKSSPGDPNFMVCLTRGYPPPKKDIE
          +P    E+  A +   +D  S+++LLS + +    P+FDV+LP+S+F+KSSPG+P+F+ C +   PP K++I+
Subjt:  DISPQSSIENEGAWDLESKDERSISELLSSIQLDQVMPIFDVFLPHSKFRKSSPGDPNFMVCLTRGYPPPKKDIE

AT3G57360.1 unknown protein

3.3e-59

43.77

Show/hide

Query:  MEATDWESSSGGASGDDEIYEQDVEDEEECLCASGNMRKLQFRKHASTARWNDQMGMAEVLENRGSLWTTTGIVRCGKIYCSFEETLFLMEVGALHLL-D
        ME  DWE+SS   S ++E    + +DEE    + G++ KLQFR  +S ARW  ++GMAEV   RG LWTTTGI+R GK YC  EE L+L E+G L +L +
Subjt:  MEATDWESSSGGASGDDEIYEQDVEDEEECLCASGNMRKLQFRKHASTARWNDQMGMAEVLENRGSLWTTTGIVRCGKIYCSFEETLFLMEVGALHLL-D

Query:  HDNSSLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGSDISPQSSIENEGAWDLESKDERSISELLSSIQLDQVMPIFDVFL
         D+  + LKD+Y+K+AE K+GC WE +EVYR+LK LG+I+G+H V W++K         P    E+  A +  + D  ++++LL  +Q+     +FDV+L
Subjt:  HDNSSLSLKDVYKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGSDISPQSSIENEGAWDLESKDERSISELLSSIQLDQVMPIFDVFL

Query:  PHSKFRKSSPGDPNFMVCLTRGYPPPKKDIEFLERTSRGIHIKYCHVEHGRVCFFSFDKLELPVL
        P+S+F+KSSPG+P+F+ C +   PP K+DI+ L++      + +CH+  GR  FFSF  ++LPVL
Subjt:  PHSKFRKSSPGDPNFMVCLTRGYPPPKKDIEFLERTSRGIHIKYCHVEHGRVCFFSFDKLELPVL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGGCTACGGATTGGGAAAGCTCTTCGGGAGGAGCTAGTGGTGATGATGAAATTTACGAGCAAGATGTAGAAGATGAAGAAGAATGTCTGTGTGCATCTGGGAACAT
GCGCAAGTTGCAATTTAGGAAGCATGCTTCAACTGCTCGATGGAATGATCAAATGGGAATGGCAGAAGTTTTAGAGAACAGGGGTAGCCTTTGGACGACAACTGGCATTG
TACGTTGTGGCAAGATTTATTGCTCCTTTGAGGAAACTTTATTTCTTATGGAAGTTGGGGCCTTGCATCTTCTGGATCATGATAATTCAAGTCTTTCTTTGAAAGATGTA
TATAAGAAGGTAGCTGAAGGAAAAAACGGATGTCTTTGGGAGCAGTTTGAGGTTTATAGACACCTCAAGTCTCTTGGTTTCATTGTTGGAAAGCATAAAGTTCCTTGGTC
TGTGAAGGGTGTTAGGAATGGCAGTGACATTTCTCCTCAAAGTTCTATTGAGAACGAAGGAGCATGGGATTTGGAATCAAAAGATGAGAGGTCGATCTCTGAACTATTAA
GTTCCATTCAGCTCGATCAAGTGATGCCCATTTTTGATGTTTTTCTTCCACATAGCAAGTTTAGAAAGTCTTCTCCTGGTGACCCAAATTTTATGGTCTGCTTGACCAGG
GGATATCCACCTCCAAAGAAAGATATTGAGTTTCTTGAGAGAACATCCAGAGGCATTCATATAAAATATTGTCATGTAGAACATGGGCGTGTCTGTTTCTTTTCATTTGA
TAAGTTGGAGCTTCCTGTCTTACCTTAG

mRNA sequence

Show/hide mRNA sequence

GGGGTATATTCGTAATACAGACTCTCTGAAATGTCAGAAAAGTTAAAATTAGATCAATTGAGTCTATTTTTATAATTTAGGTCATTTGAACGAAATAGAAACTTTTTCGG
GTCAATTCAGCTCCATTTCCCACCGAACCGTGAACGCCACTGAACGTTATCGGCTGAATTGGGTTTGATCGGTTCATTCTTCAATCTCTTCGCCGCCGCCTGTCGCCGCT
CCTCTTACCCTAAGTCTTCCCTCGACGGAATCAGCCTAAATCGAACTAAATCCAACCTTGTACCCCTCCTGATCTTTGAATTAAGTAGGGGGTTTTCACATCTCAAATCT
CTGAGAAACTTGCAGCTTCTTCCTTATTCCAGCATAACTAAGGTTGCATAACTTGAGTAGGAGTTCTCTGATGGAGGCTACGGATTGGGAAAGCTCTTCGGGAGGAGCTA
GTGGTGATGATGAAATTTACGAGCAAGATGTAGAAGATGAAGAAGAATGTCTGTGTGCATCTGGGAACATGCGCAAGTTGCAATTTAGGAAGCATGCTTCAACTGCTCGA
TGGAATGATCAAATGGGAATGGCAGAAGTTTTAGAGAACAGGGGTAGCCTTTGGACGACAACTGGCATTGTACGTTGTGGCAAGATTTATTGCTCCTTTGAGGAAACTTT
ATTTCTTATGGAAGTTGGGGCCTTGCATCTTCTGGATCATGATAATTCAAGTCTTTCTTTGAAAGATGTATATAAGAAGGTAGCTGAAGGAAAAAACGGATGTCTTTGGG
AGCAGTTTGAGGTTTATAGACACCTCAAGTCTCTTGGTTTCATTGTTGGAAAGCATAAAGTTCCTTGGTCTGTGAAGGGTGTTAGGAATGGCAGTGACATTTCTCCTCAA
AGTTCTATTGAGAACGAAGGAGCATGGGATTTGGAATCAAAAGATGAGAGGTCGATCTCTGAACTATTAAGTTCCATTCAGCTCGATCAAGTGATGCCCATTTTTGATGT
TTTTCTTCCACATAGCAAGTTTAGAAAGTCTTCTCCTGGTGACCCAAATTTTATGGTCTGCTTGACCAGGGGATATCCACCTCCAAAGAAAGATATTGAGTTTCTTGAGA
GAACATCCAGAGGCATTCATATAAAATATTGTCATGTAGAACATGGGCGTGTCTGTTTCTTTTCATTTGATAAGTTGGAGCTTCCTGTCTTACCTTAGGCATTGTTGTGG
ATTGGTCATGTAAACTACTATGGTAAAGCATCCCTCTAGAGCTGAAGCTCTGCTATTCCAAGATTTACTTCTTTGGATTTGTTTGGTATGTGATTTTAAATCCTCTTTTA
TGTTTTCAGATGTGTAGAATTAAATGAATCTGGAGGTAGAATGTTTGGTGGGCATATTTTTTAAAACAAAATTCTGAAGTTGTTAACTTGGAAATTATTTATTTTGAAAA
CTGATTTTAGGTATTTCCAATGTTTTCAG

Protein sequence

Show/hide protein sequence

MEATDWESSSGGASGDDEIYEQDVEDEEECLCASGNMRKLQFRKHASTARWNDQMGMAEVLENRGSLWTTTGIVRCGKIYCSFEETLFLMEVGALHLLDHDNSSLSLKDV
YKKVAEGKNGCLWEQFEVYRHLKSLGFIVGKHKVPWSVKGVRNGSDISPQSSIENEGAWDLESKDERSISELLSSIQLDQVMPIFDVFLPHSKFRKSSPGDPNFMVCLTR
GYPPPKKDIEFLERTSRGIHIKYCHVEHGRVCFFSFDKLELPVLP

MC00g0317 (gene) of Bitter gourd (Dali-11) v1 genome