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MC00g0320 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC00g0320
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold109:125537..125683
RNA-Seq ExpressionMC00g0320
SyntenyMC00g0320
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7053093.1 unnamed protein product [Microthlaspi erraticum]7.72e-0853.33Show/hide
Query:  SFLSWLVIRDRLPIHDRIRSWCPYSPGYCVIYSDGIEIWDHIFFD
        SF+SWLV++ RLP  DR+R+W    P  CV+ S GIE  DH+FF+
Subjt:  SFLSWLVIRDRLPIHDRIRSWCPYSPGYCVIYSDGIEIWDHIFFD
KAG7591594.1 Reverse transcriptase zinc-binding domain [Arabidopsis thaliana x Arabidopsis arenosa]1.44e-0748.89Show/hide
Query:  SFLSWLVIRDRLPIHDRIRSWCPYSPGYCVIYSDGIEIWDHIFFD
        SF++WL  + RLP  DR+RSW    P  CV+ S+G+E  DH+FF+
Subjt:  SFLSWLVIRDRLPIHDRIRSWCPYSPGYCVIYSDGIEIWDHIFFD
XP_019092669.1 PREDICTED: uncharacterized protein LOC104744616 [Camelina sativa]3.58e-0853.33Show/hide
Query:  HSFLSWLVIRDRLPIHDRIRSWCPYSPGYCVIYSDGIEIWDHIFF
        +SF+ WL I+ RLP  DR+R+W    P  CV+ SDGIE  DH+FF
Subjt:  HSFLSWLVIRDRLPIHDRIRSWCPYSPGYCVIYSDGIEIWDHIFF
XP_020887742.1 uncharacterized protein LOC110230094 [Arabidopsis lyrata subsp. lyrata]9.88e-1054.35Show/hide
Query:  HSFLSWLVIRDRLPIHDRIRSWCPYSPGYCVIYSDGIEIWDHIFFD
        +SF++WL ++ RLP  DR+RSW    P  CVI S G+EI DH+FFD
Subjt:  HSFLSWLVIRDRLPIHDRIRSWCPYSPGYCVIYSDGIEIWDHIFFD
XP_033129480.1 uncharacterized protein LOC117126158 [Brassica rapa]5.17e-0846.94Show/hide
Query:  HSFLSWLVIRDRLPIHDRIRSWCPYSPGYCVIYSDGIEIWDHIFFDYMF
        +SF+SWL +  RLP  DR+RSW    P  CV+YS  +E + H+FF+  F
Subjt:  HSFLSWLVIRDRLPIHDRIRSWCPYSPGYCVIYSDGIEIWDHIFFDYMF
TrEMBL top hitse value%identityAlignment
A0A1J3E3A1 zf-RVT domain-containing protein (Fragment)5.91e-0851.11Show/hide
Query:  SFLSWLVIRDRLPIHDRIRSWCPYSPGYCVIYSDGIEIWDHIFFD
        SF++WLV++ RLP  DR+R W    P  CV+ S GIE  DH+FF+
Subjt:  SFLSWLVIRDRLPIHDRIRSWCPYSPGYCVIYSDGIEIWDHIFFD
A0A1J3GJS3 LINE-1 retrotransposable element ORF2 protein1.79e-0751.11Show/hide
Query:  SFLSWLVIRDRLPIHDRIRSWCPYSPGYCVIYSDGIEIWDHIFFD
        SF++WLV++ RLP  DR+R W    P  CV+ S GIE  DH+FF+
Subjt:  SFLSWLVIRDRLPIHDRIRSWCPYSPGYCVIYSDGIEIWDHIFFD
A0A3N6RE04 zf-RVT domain-containing protein (Fragment)4.36e-0743.48Show/hide
Query:  HSFLSWLVIRDRLPIHDRIRSWCPYSPGYCVIYSDGIEIWDHIFFD
        HSF++WL++R+RL   DR+RSW    P  C++    +E  +H+FFD
Subjt:  HSFLSWLVIRDRLPIHDRIRSWCPYSPGYCVIYSDGIEIWDHIFFD
A0A6D2IGT6 zf-RVT domain-containing protein2.25e-0746.67Show/hide
Query:  SFLSWLVIRDRLPIHDRIRSWCPYSPGYCVIYSDGIEIWDHIFFD
        SF++WL +++RLP  DR+R+W    P  CV+   G E  DH+FFD
Subjt:  SFLSWLVIRDRLPIHDRIRSWCPYSPGYCVIYSDGIEIWDHIFFD
A0A6D2KVH3 Reverse transcriptase domain-containing protein3.74e-0853.33Show/hide
Query:  SFLSWLVIRDRLPIHDRIRSWCPYSPGYCVIYSDGIEIWDHIFFD
        SF+SWLV++ RLP  DR+R+W    P  CV+ S GIE  DH+FF+
Subjt:  SFLSWLVIRDRLPIHDRIRSWCPYSPGYCVIYSDGIEIWDHIFFD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G16486.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.3e-0640.82Show/hide
Query:  HSFLSWLVIRDRLPIHDRIRSWCPYSPGYCVIYSDGIEIWDHIFFDYMF
        H+F+SW+ IR RLP  D++ SW  + P  C++ +   E   H+FFD +F
Subjt:  HSFLSWLVIRDRLPIHDRIRSWCPYSPGYCVIYSDGIEIWDHIFFDYMF
AT5G18880.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.6e-0437.5Show/hide
Query:  SFLSWLVIRDRLPIHDRIRSWCPYSPGYCVIYSDGIEIWDHIFFDYMF
        S ++W+   +RLP  DR+R W    P   V+ S+G E   H+FF+  F
Subjt:  SFLSWLVIRDRLPIHDRIRSWCPYSPGYCVIYSDGIEIWDHIFFDYMF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CATTCTTTTTTGAGCTGGTTGGTTATTCGTGATCGTCTACCAATTCATGATCGTATTCGTTCTTGGTGTCCTTATAGTCCAGGTTATTGTGTCATTTATTCTGATGGGAT
TGAAATCTGGGACCACATTTTCTTTGATTATATGTTT
mRNA sequenceShow/hide mRNA sequence
CATTCTTTTTTGAGCTGGTTGGTTATTCGTGATCGTCTACCAATTCATGATCGTATTCGTTCTTGGTGTCCTTATAGTCCAGGTTATTGTGTCATTTATTCTGATGGGAT
TGAAATCTGGGACCACATTTTCTTTGATTATATGTTT
Protein sequenceShow/hide protein sequence
HSFLSWLVIRDRLPIHDRIRSWCPYSPGYCVIYSDGIEIWDHIFFDYMF