; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC00g0328 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC00g0328
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationscaffold109:368950..369099
RNA-Seq ExpressionMC00g0328
SyntenyMC00g0328
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEZ00971.1 Ty3/gypsy retrotransposon protein [Tanacetum cinerariifolium]2.12e-0956.25Show/hide
Query:  KFSVYDWVYLKIWQYHQTSRTKRRNEKLSAIFFSPYQILEKVGSIAYN
        +F V DWVY+K+  Y Q S   RRNEKLS  +F PYQ+LE VG +AY 
Subjt:  KFSVYDWVYLKIWQYHQTSRTKRRNEKLSAIFFSPYQILEKVGSIAYN

KAA0040959.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]6.50e-0956.25Show/hide
Query:  KFSVYDWVYLKIWQYHQTSRTKRRNEKLSAIFFSPYQILEKVGSIAYN
        ++ V +WV+LKI  Y Q S  K+RNEKLS+ +F PY+ILEKVG++AY 
Subjt:  KFSVYDWVYLKIWQYHQTSRTKRRNEKLSAIFFSPYQILEKVGSIAYN

KYP64727.1 hypothetical protein KK1_019332 [Cajanus cajan]5.94e-0954.17Show/hide
Query:  KFSVYDWVYLKIWQYHQTSRTKRRNEKLSAIFFSPYQILEKVGSIAYN
        KF V DWVYLK   Y   S  KRRNEKLS  ++ P+Q++ KVG +AY 
Subjt:  KFSVYDWVYLKIWQYHQTSRTKRRNEKLSAIFFSPYQILEKVGSIAYN

XP_021658877.1 uncharacterized protein LOC110648829 [Hevea brasiliensis]6.55e-0953.06Show/hide
Query:  FSVYDWVYLKIWQYHQTSRTKRRNEKLSAIFFSPYQILEKVGSIAYNSK
        F + DWVYLK+  Y Q+S   R+N KLSA F+SPYQ+L ++G++AY  K
Subjt:  FSVYDWVYLKIWQYHQTSRTKRRNEKLSAIFFSPYQILEKVGSIAYNSK

XP_026396852.1 uncharacterized protein LOC113291544 [Papaver somniferum]4.28e-0961.22Show/hide
Query:  FSVYDWVYLKIWQYHQTSRTKRRNEKLSAIFFSPYQILEKVGSIAYNSK
        F V DWVYL++  Y QTS  +RRN KLSA FF PYQI  KVG +AY  K
Subjt:  FSVYDWVYLKIWQYHQTSRTKRRNEKLSAIFFSPYQILEKVGSIAYNSK

TrEMBL top hitse value%identityAlignment
A0A151RRB5 Chromo domain-containing protein7.36e-0962.79Show/hide
Query:  DWVYLKIWQYHQTSRTKRRNEKLSAIFFSPYQILEKVGSIAYN
        DWVYLK   Y   S  KRRNEKLS  F+ P+Q+LEKVGS+AY 
Subjt:  DWVYLKIWQYHQTSRTKRRNEKLSAIFFSPYQILEKVGSIAYN

A0A151TCG1 Uncharacterized protein2.87e-0954.17Show/hide
Query:  KFSVYDWVYLKIWQYHQTSRTKRRNEKLSAIFFSPYQILEKVGSIAYN
        KF V DWVYLK   Y   S  KRRNEKLS  ++ P+Q++ KVG +AY 
Subjt:  KFSVYDWVYLKIWQYHQTSRTKRRNEKLSAIFFSPYQILEKVGSIAYN

A0A5A7TI22 Transposon Ty3-G Gag-Pol polyprotein3.15e-0956.25Show/hide
Query:  KFSVYDWVYLKIWQYHQTSRTKRRNEKLSAIFFSPYQILEKVGSIAYN
        ++ V +WV+LKI  Y Q S  K+RNEKLS+ +F PY+ILEKVG++AY 
Subjt:  KFSVYDWVYLKIWQYHQTSRTKRRNEKLSAIFFSPYQILEKVGSIAYN

A0A5D3BSJ2 Putative retroelement pol polyprotein7.78e-0954.17Show/hide
Query:  KFSVYDWVYLKIWQYHQTSRTKRRNEKLSAIFFSPYQILEKVGSIAYN
        ++ V DWV+LKI  Y Q S  K+RNEKLS  FF PY+I+++VG++AY 
Subjt:  KFSVYDWVYLKIWQYHQTSRTKRRNEKLSAIFFSPYQILEKVGSIAYN

A0A6P6S3S2 uncharacterized protein LOC1136874204.75e-0956Show/hide
Query:  KFSVYDWVYLKIWQYHQTSRTKRRNEKLSAIFFSPYQILEKVGSIAYNSK
        KF   DWVYLK+  Y Q+S   RRN KLSA ++ PYQ+ +KVGS+AY  K
Subjt:  KFSVYDWVYLKIWQYHQTSRTKRRNEKLSAIFFSPYQILEKVGSIAYNSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGTTCTCAGTGTATGATTGGGTCTATTTGAAGATTTGGCAATACCACCAAACATCCCGCACCAAGCGTCGCAATGAAAAACTATCAGCCATATTCTTCAGCCCCTACCA
AATTTTGGAAAAGGTGGGTTCAATAGCCTATAATTCTAAG
mRNA sequenceShow/hide mRNA sequence
AAGTTCTCAGTGTATGATTGGGTCTATTTGAAGATTTGGCAATACCACCAAACATCCCGCACCAAGCGTCGCAATGAAAAACTATCAGCCATATTCTTCAGCCCCTACCA
AATTTTGGAAAAGGTGGGTTCAATAGCCTATAATTCTAAG
Protein sequenceShow/hide protein sequence
KFSVYDWVYLKIWQYHQTSRTKRRNEKLSAIFFSPYQILEKVGSIAYNSK