CuGenDBv2

Gene ID	MC00g0334
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Eukaryotic translation initiation factor 6
Genome location	scaffold109:679893..689462
RNA-Seq Expression	MC00g0334
Synteny	MC00g0334
Gene Ontology terms	GO:0000054 - ribosomal subunit export from nucleus (biological process) GO:0000460 - maturation of 5.8S rRNA (biological process) GO:0000470 - maturation of LSU-rRNA (biological process) GO:0006413 - translational initiation (biological process) GO:0042256 - mature ribosome assembly (biological process) GO:1902626 - assembly of large subunit precursor of preribosome (biological process) GO:0005730 - nucleolus (cellular component) GO:0005829 - cytosol (cellular component) GO:0030687 - preribosome, large subunit precursor (cellular component) GO:0003743 - translation initiation factor activity (molecular function) GO:0043022 - ribosome binding (molecular function) GO:0043023 - ribosomal large subunit binding (molecular function)
InterPro domains	IPR002769 - Translation initiation factor IF6

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022147757.1 eukaryotic translation initiation factor 6-2 [Momordica charantia]

1.86e-156

93.88

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA               ELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
Subjt:  LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
        DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
Subjt:  DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV

XP_022931983.1 eukaryotic translation initiation factor 6-2-like [Cucurbita moschata]

1.71e-152

91.43

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVK SIDGTRIIGRLCA               ELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTI+CNDHVAL HTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGL AN
Subjt:  LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
        DW AFCGSDTTATELSVIESVFKLRE QPSSIVDEMRKSLIDSYV
Subjt:  DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV

XP_022973842.1 eukaryotic translation initiation factor 6-2 [Cucurbita maxima]

4.20e-153

91.84

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVK SIDGTRIIGRLCA               ELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTI+CNDHVAL HTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGL AN
Subjt:  LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
        DW AFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
Subjt:  DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV

XP_038880643.1 eukaryotic translation initiation factor 6-2-like [Benincasa hispida]

1.26e-154

92.24

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFE+ELGGVIPVVKASIDGTRIIGRLCA               ELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTIACNDHVAL HTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
Subjt:  LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
        DWIAFCGSDTTATELSVIESVFKLREAQPSSIV+EMRKSLIDSYV
Subjt:  DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV

XP_038900322.1 eukaryotic translation initiation factor 6-2 [Benincasa hispida]

2.96e-153

91.43

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS FE+ELGGVIPVVKASIDGTRIIGRLCA               ELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTIACNDHVAL HTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
Subjt:  LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
        DW AFCGSDTTATELSVIESVFKLREAQPSSIV+EMRKSLIDSYV
Subjt:  DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV

TrEMBL top hits

e value

%identity

Alignment

A0A6J1D392 Eukaryotic translation initiation factor 6

9.01e-157

93.88

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA               ELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
Subjt:  LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
        DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
Subjt:  DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV

A0A6J1F0A8 Eukaryotic translation initiation factor 6

8.28e-153

91.43

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVK SIDGTRIIGRLCA               ELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTI+CNDHVAL HTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGL AN
Subjt:  LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
        DW AFCGSDTTATELSVIESVFKLRE QPSSIVDEMRKSLIDSYV
Subjt:  DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV

A0A6J1G8F7 Eukaryotic translation initiation factor 6

1.60e-150

89.8

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER
        MA RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS+FE+EL GVIPVVK SIDGTRIIGRLCA               ELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTIACNDHVAL HTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGL  N
Subjt:  LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
        DW AFCGSDTTATELSV+ESVFKLREAQPSSIVDEMRKSLIDSYV
Subjt:  DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV

A0A6J1I8L9 Eukaryotic translation initiation factor 6

2.03e-153

91.84

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVK SIDGTRIIGRLCA               ELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTI+CNDHVAL HTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGL AN
Subjt:  LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
        DW AFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
Subjt:  DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV

A0A6J1L2F0 Eukaryotic translation initiation factor 6

1.60e-150

89.8

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER
        MA RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS+FE+EL GVIPVVK SIDGTRIIGRLCA               ELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTIACNDHVAL HTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGL  N
Subjt:  LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
        DW AFCGSDTTATELSV+ESVFKLREAQPSSIVDEMRKSLIDSYV
Subjt:  DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV

SwissProt top hits

e value

%identity

Alignment

O55135 Eukaryotic translation initiation factor 6

1.9e-92

71.19

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER
        MA R  FEN+CE+G F+KLTNAYCLVAIGGSENFYS FE EL   IPVV ASI G RIIGR+C                ELQH+RNSLPD V ++R++ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGN   CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVIAAG+  N
Subjt:  LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDS
        DW AFCG DTT+TELSV+ESVFKL EA+PS+I   MR SLIDS
Subjt:  DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDS

P56537 Eukaryotic translation initiation factor 6

1.9e-92

71.6

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER
        MA R  FEN+CEIG F+KLTN YCLVAIGGSENFYS FE EL   IPVV ASI G RIIGR+C                ELQH+RNSLPD V ++R++ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGN   CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVIAAG+  N
Subjt:  LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDS
        DW AFCG DTT+TELSV+ESVFKL EAQPS+I   MR SLIDS
Subjt:  DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDS

Q3KRD8 Eukaryotic translation initiation factor 6

5.6e-92

70.78

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER
        MA R  FEN+CE+G F+KLTN YCLVAIGGSENFYS FE EL   IPVV ASI G RIIGR+C                ELQH+RNSLPD V ++R++ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGN   CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVIAAG+  N
Subjt:  LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDS
        DW AFCG DTT+TELSV+ESVFKL EA+PS+I   MR SLIDS
Subjt:  DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDS

Q9M060 Eukaryotic translation initiation factor 6-2

9.2e-111

82.04

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER
        MATRL FEN+CE+GVFSKLTNAYCLVAIGGSENFYSAFESEL  VIP+VK SI GTRIIGRLCA               ELQHLRNSLPDQVVVQRI ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGN IACND+VALAHTDLD+ETEE+IADVLGVEVFRQT+AGN+LVGSYC+ +N+GG+VHPHTS+EDL+ELSTLLQVPLVAGTVNRGSEVIAAG+T N
Subjt:  LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
        DW +FCGSDTTATELSVI+S+FKLREAQPSSIVDEMRKSLID+YV
Subjt:  DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV

Q9TU47 Eukaryotic translation initiation factor 6

6.6e-93

71.6

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER
        MA R  FEN+CEIG F+KLTN+YCLVAIGGSENFYS FE EL G IPVV ASI G RIIGR+C                ELQH+RN LPD V ++R++ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGN   CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVIAAG+  N
Subjt:  LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDS
        DW AFCG DTT+TELSV+ESVFKL EAQPS+I   MR SLIDS
Subjt:  DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDS

Arabidopsis top hits

e value

%identity

Alignment

AT2G39820.1 Translation initiation factor IF6

2.2e-83

62.75

Show/hide

Query:  MATRLMFE-NSCEIGVFSKLTNAYCLV-AIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQ
        MATRL ++ N+CEIGVFSKLTNAYCLV A   S NF++ +ES+L GVIP+V  SI G+  IG LC                ELQHLR+SLPD+VVVQRI+
Subjt:  MATRLMFE-NSCEIGVFSKLTNAYCLV-AIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQ

Query:  ERLSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLT
        E + ALGN IACND+VAL H  L+++TEE+I+DVLGVEV+RQT+A N LVGSYCS +N GG+VH +T++E++ EL+ L+QVPLVAGTVNRGS+VI+AGLT
Subjt:  ERLSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLT

Query:  ANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
         NDW AFCGSDTTA ELSV+ ++FKL ++QP  +  EMRKSLID+YV
Subjt:  ANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV

AT3G55620.1 Translation initiation factor IF6

6.5e-112

82.04

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER
        MATRL FEN+CE+GVFSKLTNAYCLVAIGGSENFYSAFESEL  VIP+VK SI GTRIIGRLCA               ELQHLRNSLPDQVVVQRI ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGN IACND+VALAHTDLD+ETEE+IADVLGVEVFRQT+AGN+LVGSYC+ +N+GG+VHPHTS+EDL+ELSTLLQVPLVAGTVNRGSEVIAAG+T N
Subjt:  LSALGNTIACNDHVALAHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV
        DW +FCGSDTTATELSVI+S+FKLREAQPSSIVDEMRKSLID+YV
Subjt:  DWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV

Sequences

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CDS sequence

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ATGGCGACGAGGCTTATGTTTGAGAACTCATGTGAAATTGGGGTTTTCTCCAAACTCACTAATGCTTACTGTTTGGTTGCAATTGGTGGCTCTGAGAACTTCTACAGTGC
CTTCGAATCTGAATTGGGTGGTGTCATTCCGGTTGTTAAAGCATCCATTGATGGCACTCGCATTATTGGCCGCTTATGTGCTGAACTTCAGCACTTGAGGAACAGTCTAC
CCGACCAAGTTGTTGTTCAACGCATACAAGAGAGACTATCTGCTTTAGGGAATACCATTGCTTGTAATGATCATGTTGCTCTCGCACATACTGATCTTGACCGGGAAACT
GAAGAACTCATTGCTGATGTTCTCGGAGTAGAGGTCTTTAGGCAGACGGTGGCGGGTAACGTTCTTGTGGGAAGCTACTGCAGCTTCACAAATAGGGGTGGCTTGGTTCA
TCCCCATACGTCTATTGAAGATTTGGACGAATTATCAACCCTTCTTCAGGTCCCTTTAGTAGCCGGAACTGTCAATCGTGGAAGTGAAGTGATTGCTGCTGGCTTAACAG
CAAATGACTGGATTGCATTTTGTGGTTCAGACACTACTGCAACCGAGTTATCGGTGATCGAGAGCGTTTTCAAATTGAGGGAGGCTCAACCGAGTTCGATTGTTGACGAG
ATGAGGAAGTCACTAATTGACAGTTACGTTTGA

mRNA sequence

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ATGAATCCCAAATATGTAACTAAAAAAACAAAACAATTAAAAAAAAGACCTATCGTTATAACTCAAATTATATTGATTTTTTACGACTCATTATCCTTATTTTCTATATA
AAAAAACATAATAATATTAAAAAAAATCCATGATTAAAAAAAAAAATCATTTAAAAAGTAAAAAAAAAAAAAACAAAGAAACCCTAAAACATTTTTTCTCCCTCCCCTCC
GACCCTCTTCTGCTCCCTCCCTCCCTCGAATTTTCTCTTCCCCAAGCTTCAGTCTCCACCGCCGCCGCCTTCAGTTGTCGCCGTCGCCGTCGCCGTACAGTGAGTTGAGA
AAACCCTCGAGGACATTGCCGACTGTTACCACTTCGCAGAGCGCCCGCCGACCACTTTGCCGCCAACTGCTGCAGGGACTTGGAATTTATCTGTTGATTGATCAAAAATT
TATCTTGCAACTCATGGCGACGAGGCTTATGTTTGAGAACTCATGTGAAATTGGGGTTTTCTCCAAACTCACTAATGCTTACTGTTTGGTTGCAATTGGTGGCTCTGAGA
ACTTCTACAGTGCCTTCGAATCTGAATTGGGTGGTGTCATTCCGGTTGTTAAAGCATCCATTGATGGCACTCGCATTATTGGCCGCTTATGTGCTGAACTTCAGCACTTG
AGGAACAGTCTACCCGACCAAGTTGTTGTTCAACGCATACAAGAGAGACTATCTGCTTTAGGGAATACCATTGCTTGTAATGATCATGTTGCTCTCGCACATACTGATCT
TGACCGGGAAACTGAAGAACTCATTGCTGATGTTCTCGGAGTAGAGGTCTTTAGGCAGACGGTGGCGGGTAACGTTCTTGTGGGAAGCTACTGCAGCTTCACAAATAGGG
GTGGCTTGGTTCATCCCCATACGTCTATTGAAGATTTGGACGAATTATCAACCCTTCTTCAGGTCCCTTTAGTAGCCGGAACTGTCAATCGTGGAAGTGAAGTGATTGCT
GCTGGCTTAACAGCAAATGACTGGATTGCATTTTGTGGTTCAGACACTACTGCAACCGAGTTATCGGTGATCGAGAGCGTTTTCAAATTGAGGGAGGCTCAACCGAGTTC
GATTGTTGACGAGATGAGGAAGTCACTAATTGACAGTTACGTTTGAAGTTATATATTTTCTGTTACAGCTGTGAACTGCTTTGTTGTTACTTTTGCCTTTTCCTTTCATC
ATATTTAACAACTTTGTATGAATGAAATTGGGGTTTGTACTTGAAGCTTATTTGGTTGAAAATATATTTAACAATTAAGCTTGAGCAGTCCTAGAAATGT

Protein sequence

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MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCAELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTDLDRET
EELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVDE
MRKSLIDSYV

MC00g0334 (gene) of Bitter gourd (Dali-11) v1 genome