; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC00g0343 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC00g0343
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionprotein SDE2 homolog
Genome locationscaffold7:28986..29811
RNA-Seq ExpressionMC00g0343
SyntenyMC00g0343
Gene Ontology termsGO:0007049 - cell cycle (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140590.1 replication stress response regulator SDE2 [Cucumis sativus]1.69e-8570.12Show/hide
Query:  SDEDNTDNEEESEKSVILNSGCQSDL-KDTEGSSDSVSCGKQGDVSGEASCESRFEEEKDMAMQESMALVGCSSEKAPHSEWIDVVEMNNHTTQGADVPF
        SDED+ +NEEESEKSVILN G +SDL KD EGSSDSV+ GK GD SG +SCES  EEEKDMA QE+M LVG SSEK   SE +D VEMN+ TTQ A +  
Subjt:  SDEDNTDNEEESEKSVILNSGCQSDL-KDTEGSSDSVSCGKQGDVSGEASCESRFEEEKDMAMQESMALVGCSSEKAPHSEWIDVVEMNNHTTQGADVPF

Query:  AKAVVVSVDQEIEAVKQDADKVAIVNSES----RQDTSGPNNGETIEDLSTLLEPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEVLGLERL
         +AV +S  QE E VKQDA +V IVNSE+     QDTS PN+GE IEDLST  EPNGSPVSKLS   ET A+  N  E  LNFDDFSSA EMEVLGLERL
Subjt:  AKAVVVSVDQEIEAVKQDADKVAIVNSES----RQDTSGPNNGETIEDLSTLLEPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEVLGLERL

Query:  KSELQARGLKCGGTLQERAAKFSFLKSTPLDKLPKKLLAAK
        KSELQARGLKCGGTLQERAA+   LKSTPLDKLPKKLLA K
Subjt:  KSELQARGLKCGGTLQERAAKFSFLKSTPLDKLPKKLLAAK

XP_022154619.1 protein SDE2 homolog [Momordica charantia]3.18e-13289.87Show/hide
Query:  SDEDNTDNEEESEKSVILNSGCQSDL-KDTEGSSDSVSCGKQGDVSGEASCESRFEEEKDMAMQESMALVGCSSEKAPHSEWIDVVEMNNHTTQGADVPF
        SDEDNTDNEEES+KSVILNSGC+ DL KDTEGSSDSVSCGKQGDVSGEASCES  EEEKDMA+QE MALVGCSSEKAPHSE IDVVEMNNHTTQGADVP 
Subjt:  SDEDNTDNEEESEKSVILNSGCQSDL-KDTEGSSDSVSCGKQGDVSGEASCESRFEEEKDMAMQESMALVGCSSEKAPHSEWIDVVEMNNHTTQGADVPF

Query:  AKAVVVSVDQEIEAVKQDADKVAIVNSESRQDTSGPNNGETIEDLSTLLEPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEVLGLERLKSEL
        A+AV +S DQEIEAVKQDAD+VAIVNSE+RQDTSGPNNGETIEDLSTL EPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEV+GLERLKSEL
Subjt:  AKAVVVSVDQEIEAVKQDADKVAIVNSESRQDTSGPNNGETIEDLSTLLEPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEVLGLERLKSEL

Query:  QARGLKCGGTLQERAAKFSFLKSTPLDKLPKKLLAAK
        QARGLKCGGTLQERAA+   LKSTPLD LPKKLLA K
Subjt:  QARGLKCGGTLQERAAKFSFLKSTPLDKLPKKLLAAK

XP_022156550.1 protein SDE2 homolog [Momordica charantia]5.11e-8972.15Show/hide
Query:  SDEDNTDNEEESEKSVILNSGCQSDLKD-TEGSSDSVSCGKQGDVSGEASCESRFEEEKDMAMQESMALVGCSSEKAPHSEWIDVVEMNNHTTQGADVPF
        SDED+ DNEEESEKSVILNSGCQ DL + TEGSSDSVSCGKQGDVSG ASCES  EEEKDMA                                  DVP 
Subjt:  SDEDNTDNEEESEKSVILNSGCQSDLKD-TEGSSDSVSCGKQGDVSGEASCESRFEEEKDMAMQESMALVGCSSEKAPHSEWIDVVEMNNHTTQGADVPF

Query:  AKAVVVSVDQEIEAVKQDADKVAIVNSESRQDTSGPNNGETIEDLSTLLEPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEVLGLERLKSEL
        A+AV VS DQEIEAVKQDAD+VAIVNSE+RQDTSGPN GETIEDLS     NGSPVSKL   KETAASRCNSEEATLNFDDFSSAAEMEV+GLERLK EL
Subjt:  AKAVVVSVDQEIEAVKQDADKVAIVNSESRQDTSGPNNGETIEDLSTLLEPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEVLGLERLKSEL

Query:  QARGLKCGGTLQERAAKFSFLKSTPLDKLPKKLLAAK
        QARGLKCGGTLQERAA+   LKSTPLD LPKKLLA K
Subjt:  QARGLKCGGTLQERAAKFSFLKSTPLDKLPKKLLAAK

XP_022156565.1 protein SDE2 homolog [Momordica charantia]9.66e-156100Show/hide
Query:  SDEDNTDNEEESEKSVILNSGCQSDLKDTEGSSDSVSCGKQGDVSGEASCESRFEEEKDMAMQESMALVGCSSEKAPHSEWIDVVEMNNHTTQGADVPFA
        SDEDNTDNEEESEKSVILNSGCQSDLKDTEGSSDSVSCGKQGDVSGEASCESRFEEEKDMAMQESMALVGCSSEKAPHSEWIDVVEMNNHTTQGADVPFA
Subjt:  SDEDNTDNEEESEKSVILNSGCQSDLKDTEGSSDSVSCGKQGDVSGEASCESRFEEEKDMAMQESMALVGCSSEKAPHSEWIDVVEMNNHTTQGADVPFA

Query:  KAVVVSVDQEIEAVKQDADKVAIVNSESRQDTSGPNNGETIEDLSTLLEPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEVLGLERLKSELQ
        KAVVVSVDQEIEAVKQDADKVAIVNSESRQDTSGPNNGETIEDLSTLLEPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEVLGLERLKSELQ
Subjt:  KAVVVSVDQEIEAVKQDADKVAIVNSESRQDTSGPNNGETIEDLSTLLEPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEVLGLERLKSELQ

Query:  ARGLKCGGTLQERAAKFSFLKSTPLDKLPKKLLAAK
        ARGLKCGGTLQERAAKFSFLKSTPLDKLPKKLLAAK
Subjt:  ARGLKCGGTLQERAAKFSFLKSTPLDKLPKKLLAAK

XP_038875299.1 replication stress response regulator SDE2 [Benincasa hispida]5.77e-8769.58Show/hide
Query:  SDEDNTDNEEESEKSVILNSGCQSDLKDTEGSSDSVSCGKQGDVSGEASCESRFEEEKDMAMQESMALVGCSSEKAPHSEWIDVVEMNNHTTQGADVPFA
        SDED+T+NEE SEKSVILN G QSDLKDTEGSSDSV+ GK G+ SG +SCES  EEEKD+A++E+M LVG SSEKA  SE +D+VEMN+ TTQ A VP +
Subjt:  SDEDNTDNEEESEKSVILNSGCQSDLKDTEGSSDSVSCGKQGDVSGEASCESRFEEEKDMAMQESMALVGCSSEKAPHSEWIDVVEMNNHTTQGADVPFA

Query:  KAVVVSVDQEIEAVKQDADKVAIVNSES----RQDTSGPNNGETIEDLSTLLEPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEVLGLERLK
        + V  S  QE E VKQDA +V I NSE+     QD S PNNGE IEDLST  EPNG PVSKL   ++T A+  +S EA LNFDDFSSAAEMEVLGLERLK
Subjt:  KAVVVSVDQEIEAVKQDADKVAIVNSES----RQDTSGPNNGETIEDLSTLLEPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEVLGLERLK

Query:  SELQARGLKCGGTLQERAAKFSFLKSTPLDKLPKKLLAAK
        SELQ RGLKCGGTLQERAA+   LKSTPLDKLPKKLLA K
Subjt:  SELQARGLKCGGTLQERAAKFSFLKSTPLDKLPKKLLAAK

TrEMBL top hitse value%identityAlignment
A0A0A0KEZ6 Ubiquitin-like domain-containing protein8.19e-8670.12Show/hide
Query:  SDEDNTDNEEESEKSVILNSGCQSDL-KDTEGSSDSVSCGKQGDVSGEASCESRFEEEKDMAMQESMALVGCSSEKAPHSEWIDVVEMNNHTTQGADVPF
        SDED+ +NEEESEKSVILN G +SDL KD EGSSDSV+ GK GD SG +SCES  EEEKDMA QE+M LVG SSEK   SE +D VEMN+ TTQ A +  
Subjt:  SDEDNTDNEEESEKSVILNSGCQSDL-KDTEGSSDSVSCGKQGDVSGEASCESRFEEEKDMAMQESMALVGCSSEKAPHSEWIDVVEMNNHTTQGADVPF

Query:  AKAVVVSVDQEIEAVKQDADKVAIVNSES----RQDTSGPNNGETIEDLSTLLEPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEVLGLERL
         +AV +S  QE E VKQDA +V IVNSE+     QDTS PN+GE IEDLST  EPNGSPVSKLS   ET A+  N  E  LNFDDFSSA EMEVLGLERL
Subjt:  AKAVVVSVDQEIEAVKQDADKVAIVNSES----RQDTSGPNNGETIEDLSTLLEPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEVLGLERL

Query:  KSELQARGLKCGGTLQERAAKFSFLKSTPLDKLPKKLLAAK
        KSELQARGLKCGGTLQERAA+   LKSTPLDKLPKKLLA K
Subjt:  KSELQARGLKCGGTLQERAAKFSFLKSTPLDKLPKKLLAAK

A0A6J1DMN6 protein SDE2 homolog1.54e-13289.87Show/hide
Query:  SDEDNTDNEEESEKSVILNSGCQSDL-KDTEGSSDSVSCGKQGDVSGEASCESRFEEEKDMAMQESMALVGCSSEKAPHSEWIDVVEMNNHTTQGADVPF
        SDEDNTDNEEES+KSVILNSGC+ DL KDTEGSSDSVSCGKQGDVSGEASCES  EEEKDMA+QE MALVGCSSEKAPHSE IDVVEMNNHTTQGADVP 
Subjt:  SDEDNTDNEEESEKSVILNSGCQSDL-KDTEGSSDSVSCGKQGDVSGEASCESRFEEEKDMAMQESMALVGCSSEKAPHSEWIDVVEMNNHTTQGADVPF

Query:  AKAVVVSVDQEIEAVKQDADKVAIVNSESRQDTSGPNNGETIEDLSTLLEPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEVLGLERLKSEL
        A+AV +S DQEIEAVKQDAD+VAIVNSE+RQDTSGPNNGETIEDLSTL EPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEV+GLERLKSEL
Subjt:  AKAVVVSVDQEIEAVKQDADKVAIVNSESRQDTSGPNNGETIEDLSTLLEPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEVLGLERLKSEL

Query:  QARGLKCGGTLQERAAKFSFLKSTPLDKLPKKLLAAK
        QARGLKCGGTLQERAA+   LKSTPLD LPKKLLA K
Subjt:  QARGLKCGGTLQERAAKFSFLKSTPLDKLPKKLLAAK

A0A6J1DQL5 protein SDE2 homolog2.47e-8972.15Show/hide
Query:  SDEDNTDNEEESEKSVILNSGCQSDLKD-TEGSSDSVSCGKQGDVSGEASCESRFEEEKDMAMQESMALVGCSSEKAPHSEWIDVVEMNNHTTQGADVPF
        SDED+ DNEEESEKSVILNSGCQ DL + TEGSSDSVSCGKQGDVSG ASCES  EEEKDMA                                  DVP 
Subjt:  SDEDNTDNEEESEKSVILNSGCQSDLKD-TEGSSDSVSCGKQGDVSGEASCESRFEEEKDMAMQESMALVGCSSEKAPHSEWIDVVEMNNHTTQGADVPF

Query:  AKAVVVSVDQEIEAVKQDADKVAIVNSESRQDTSGPNNGETIEDLSTLLEPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEVLGLERLKSEL
        A+AV VS DQEIEAVKQDAD+VAIVNSE+RQDTSGPN GETIEDLS     NGSPVSKL   KETAASRCNSEEATLNFDDFSSAAEMEV+GLERLK EL
Subjt:  AKAVVVSVDQEIEAVKQDADKVAIVNSESRQDTSGPNNGETIEDLSTLLEPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEVLGLERLKSEL

Query:  QARGLKCGGTLQERAAKFSFLKSTPLDKLPKKLLAAK
        QARGLKCGGTLQERAA+   LKSTPLD LPKKLLA K
Subjt:  QARGLKCGGTLQERAAKFSFLKSTPLDKLPKKLLAAK

A0A6J1DQN2 protein SDE2 homolog4.68e-156100Show/hide
Query:  SDEDNTDNEEESEKSVILNSGCQSDLKDTEGSSDSVSCGKQGDVSGEASCESRFEEEKDMAMQESMALVGCSSEKAPHSEWIDVVEMNNHTTQGADVPFA
        SDEDNTDNEEESEKSVILNSGCQSDLKDTEGSSDSVSCGKQGDVSGEASCESRFEEEKDMAMQESMALVGCSSEKAPHSEWIDVVEMNNHTTQGADVPFA
Subjt:  SDEDNTDNEEESEKSVILNSGCQSDLKDTEGSSDSVSCGKQGDVSGEASCESRFEEEKDMAMQESMALVGCSSEKAPHSEWIDVVEMNNHTTQGADVPFA

Query:  KAVVVSVDQEIEAVKQDADKVAIVNSESRQDTSGPNNGETIEDLSTLLEPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEVLGLERLKSELQ
        KAVVVSVDQEIEAVKQDADKVAIVNSESRQDTSGPNNGETIEDLSTLLEPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEVLGLERLKSELQ
Subjt:  KAVVVSVDQEIEAVKQDADKVAIVNSESRQDTSGPNNGETIEDLSTLLEPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEVLGLERLKSELQ

Query:  ARGLKCGGTLQERAAKFSFLKSTPLDKLPKKLLAAK
        ARGLKCGGTLQERAAKFSFLKSTPLDKLPKKLLAAK
Subjt:  ARGLKCGGTLQERAAKFSFLKSTPLDKLPKKLLAAK

A0A6J1H6Y8 protein SDE2 homolog1.57e-8368.44Show/hide
Query:  DEDNTDNEEESEKSVILNSGCQSDL-KDTEGSSDSVSCGKQGDVSGEASCESRFEEEKDMAMQESMALVGCSSEKAPHSEWIDVVEMNNHTTQGADVPF-
        D D++D+EEE+EKSVILN GCQSDL KD EGSSDSV+ GK G  SGEAS ES  EEEK++A+QE+M LVG SSEKA  SE  + VE+NN TTQGA V   
Subjt:  DEDNTDNEEESEKSVILNSGCQSDL-KDTEGSSDSVSCGKQGDVSGEASCESRFEEEKDMAMQESMALVGCSSEKAPHSEWIDVVEMNNHTTQGADVPF-

Query:  ---AKAVVVSVDQEIEAVKQDADKVAIVNSE----SRQDTSGPNNGETIEDLSTLLEPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEVLGL
           A+AV VS DQE E  +Q A  V I N E    + QD S PNNGET+EDLS+L EPNGSPV+KLS  +ET+AS+ NSE A LNF+DFSSAAEMEVLGL
Subjt:  ---AKAVVVSVDQEIEAVKQDADKVAIVNSE----SRQDTSGPNNGETIEDLSTLLEPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEVLGL

Query:  ERLKSELQARGLKCGGTLQERAAKFSFLKSTPLDKLPKKLLAAK
        ERLKSELQARGLKCGGTLQERAA+   LKSTPLDK+PKKLLA K
Subjt:  ERLKSELQARGLKCGGTLQERAAKFSFLKSTPLDKLPKKLLAAK

SwissProt top hitse value%identityAlignment
Q12874 Splicing factor 3A subunit 39.7e-0747.3Show/hide
Query:  PKETAASRCNSEEATLNFDDFSSAAEMEVLGLERLKSELQARGLKCGGTLQERAAKFSFLKSTPLDKLPKKLLA
        PKET+++  ++  A L+   FSS  E+  LGL+RLKS L A GLKCGGTL+ERA +    K   L+ L   L A
Subjt:  PKETAASRCNSEEATLNFDDFSSAAEMEVLGLERLKSELQARGLKCGGTLQERAAKFSFLKSTPLDKLPKKLLA

Q5RET9 Replication stress response regulator SDE23.3e-0736.19Show/hide
Query:  QDTSGPNNGETIEDLSTLLEPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEVLGLERLKSELQARGLKCGGTLQERAAKFSFLKSTPLDKLP
        ++T    +GE + +++   E     V+KL   +E+       ++ T++   F+S AE+E+LGLE+LK EL A GLKCGGTLQERAA+   ++    +++ 
Subjt:  QDTSGPNNGETIEDLSTLLEPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEVLGLERLKSELQARGLKCGGTLQERAAKFSFLKSTPLDKLP

Query:  KKLLA
          L A
Subjt:  KKLLA

Q6IQ49 Replication stress response regulator SDE24.4e-0736.19Show/hide
Query:  QDTSGPNNGETIEDLSTLLEPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEVLGLERLKSELQARGLKCGGTLQERAAKFSFLKSTPLDKLP
        ++T    +GE + +++   E     V+KL   +E+       ++ T++   F+S AE+E+LGLE+LK EL A GLKCGGTLQERAA+   ++    +++ 
Subjt:  QDTSGPNNGETIEDLSTLLEPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEVLGLERLKSELQARGLKCGGTLQERAAKFSFLKSTPLDKLP

Query:  KKLLA
          L A
Subjt:  KKLLA

Q7T293 Replication stress response regulator SDE21.4e-0828.34Show/hide
Query:  ASCESRFEEEKDMAMQESMALVGCSSEKAPHSEWIDVVEMNNHTTQGADVPFAKAVVVSVDQEIEAVKQDADKVAIVNSESRQDTSGPNNGETIEDLSTL
        +S  S     + +  +E+  +   SS  AP    ++  EM       A +  + +     +   E V+Q A++V  +  E +         +T E++   
Subjt:  ASCESRFEEEKDMAMQESMALVGCSSEKAPHSEWIDVVEMNNHTTQGADVPFAKAVVVSVDQEIEAVKQDADKVAIVNSESRQDTSGPNNGETIEDLSTL

Query:  LEPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEVLGLERLKSELQARGLKCGGTLQERAAKFSFLKSTPLDKLPKKLLA
         E + + +S  S+  E  +   +  E  L+    S   ++E LGLERLK EL  RG+KCGGTLQERAA+   +K    D++   LLA
Subjt:  LEPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEVLGLERLKSELQARGLKCGGTLQERAAKFSFLKSTPLDKLPKKLLA

Q8K1J5 Replication stress response regulator SDE22.0e-0757.41Show/hide
Query:  FSSAAEMEVLGLERLKSELQARGLKCGGTLQERAAKFSFLKSTPLDKLPKKLLA
        FSSAAE+E LGLERLK EL   GLKCGGTLQERAA+   ++    + +   L A
Subjt:  FSSAAEMEVLGLERLKSELQARGLKCGGTLQERAAKFSFLKSTPLDKLPKKLLA

Arabidopsis top hitse value%identityAlignment
AT3G06455.1 ubiquitin family protein5.7e-1844.62Show/hide
Query:  VDQEIEAVKQDADKVAIVNSESRQDTSGPNNGETIEDLSTLLEPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEVLGLERLKSELQARGLKC
        V Q  + VK +   V  +N E   D +  +  + +E +      +   V +    KE     C      LNF +F +A +MEVLG+ERLK+ELQ+RGLKC
Subjt:  VDQEIEAVKQDADKVAIVNSESRQDTSGPNNGETIEDLSTLLEPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEVLGLERLKSELQARGLKC

Query:  GGTLQERAAKFSFLKSTPLDKLPKKLLAAK
         GTL+ERAA+   LKSTPLDKLPKKLLA K
Subjt:  GGTLQERAAKFSFLKSTPLDKLPKKLLAAK

AT4G01000.1 Ubiquitin-like superfamily protein1.3e-2740.34Show/hide
Query:  SDEDNTDNEEESEKSVILNSGCQSDLKDTEGSSDSVSCGKQGDVSGEASCESRFEEEKDMAMQESMALVGCSSEKAPHSEWIDVVEMNNHTTQGADVPFA
        SD D++D+EE+ EKSV+LN+G                 G  GD SG++SC S  EEE D  M  S  +V    E+    + I   EMN       D+P +
Subjt:  SDEDNTDNEEESEKSVILNSGCQSDLKDTEGSSDSVSCGKQGDVSGEASCESRFEEEKDMAMQESMALVGCSSEKAPHSEWIDVVEMNNHTTQGADVPFA

Query:  KAVVVSVDQEIEAVKQDADKVAIVNSESRQDTSGPNNGETIEDLSTLLEPNGSPVSKLSAPKETAA--SRCNSEEATLNFDDFSSAAEMEVLGLERLKSE
         AV      +   V  + D++       + + S  + G+ + D++       + V +    KET +  + C      LNFDDF+S A+MEVLG+ERLK+E
Subjt:  KAVVVSVDQEIEAVKQDADKVAIVNSESRQDTSGPNNGETIEDLSTLLEPNGSPVSKLSAPKETAA--SRCNSEEATLNFDDFSSAAEMEVLGLERLKSE

Query:  LQARGLKCGGTLQERAAKFSFLKSTPLDKLPKKLLAAK
        LQ+RGLKCGGTL+ERAA+   LKSTPLDKLPKKLLA K
Subjt:  LQARGLKCGGTLQERAAKFSFLKSTPLDKLPKKLLAAK

AT5G06160.1 splicing factor-related1.7e-0643.75Show/hide
Query:  SEEATLNFDDFSSAAEMEVLGLERLKSELQARGLKCGGTLQERAAKFSFLKSTPLDKLPKKLLA
        S+   ++ D +S+  E+  +G E+LK  L A GLK GGT Q+RA +    K TPL+KL KK  A
Subjt:  SEEATLNFDDFSSAAEMEVLGLERLKSELQARGLKCGGTLQERAAKFSFLKSTPLDKLPKKLLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCGGATGAGGACAACACTGATAATGAAGAGGAAAGCGAGAAATCAGTCATCTTGAACAGTGGTTGTCAATCTGATTTGAAGGACACCGAAGGGAGCTCAGACTCTGTTAG
CTGTGGTAAACAAGGCGATGTTTCTGGTGAAGCCTCGTGCGAAAGCCGTTTCGAGGAAGAAAAGGACATGGCAATGCAGGAAAGCATGGCATTAGTTGGATGCTCCAGTG
AAAAAGCTCCTCATTCTGAATGGATTGATGTGGTTGAAATGAACAACCATACTACTCAGGGTGCAGATGTACCTTTTGCAAAGGCTGTTGTTGTTTCTGTCGATCAAGAA
ATCGAGGCTGTAAAACAGGATGCTGACAAGGTTGCGATTGTAAACTCAGAAAGCCGTCAAGACACGTCAGGTCCAAATAATGGTGAAACTATTGAAGATTTATCCACACT
TCTTGAACCAAATGGCTCTCCAGTGTCCAAGTTGAGTGCTCCCAAAGAAACAGCTGCAAGTAGATGCAATTCAGAAGAAGCAACACTGAATTTTGATGATTTTAGTTCTG
CAGCAGAAATGGAGGTTCTTGGATTGGAAAGGCTAAAGAGTGAACTGCAAGCAAGAGGGTTAAAATGTGGAGGGACCTTGCAAGAGAGGGCAGCCAAGTTTTCCTTTCTC
AAGTCTACCCCTTTAGACAAGCTTCCAAAGAAGCTTCTTGCCGCAAAG
mRNA sequenceShow/hide mRNA sequence
TCGGATGAGGACAACACTGATAATGAAGAGGAAAGCGAGAAATCAGTCATCTTGAACAGTGGTTGTCAATCTGATTTGAAGGACACCGAAGGGAGCTCAGACTCTGTTAG
CTGTGGTAAACAAGGCGATGTTTCTGGTGAAGCCTCGTGCGAAAGCCGTTTCGAGGAAGAAAAGGACATGGCAATGCAGGAAAGCATGGCATTAGTTGGATGCTCCAGTG
AAAAAGCTCCTCATTCTGAATGGATTGATGTGGTTGAAATGAACAACCATACTACTCAGGGTGCAGATGTACCTTTTGCAAAGGCTGTTGTTGTTTCTGTCGATCAAGAA
ATCGAGGCTGTAAAACAGGATGCTGACAAGGTTGCGATTGTAAACTCAGAAAGCCGTCAAGACACGTCAGGTCCAAATAATGGTGAAACTATTGAAGATTTATCCACACT
TCTTGAACCAAATGGCTCTCCAGTGTCCAAGTTGAGTGCTCCCAAAGAAACAGCTGCAAGTAGATGCAATTCAGAAGAAGCAACACTGAATTTTGATGATTTTAGTTCTG
CAGCAGAAATGGAGGTTCTTGGATTGGAAAGGCTAAAGAGTGAACTGCAAGCAAGAGGGTTAAAATGTGGAGGGACCTTGCAAGAGAGGGCAGCCAAGTTTTCCTTTCTC
AAGTCTACCCCTTTAGACAAGCTTCCAAAGAAGCTTCTTGCCGCAAAG
Protein sequenceShow/hide protein sequence
SDEDNTDNEEESEKSVILNSGCQSDLKDTEGSSDSVSCGKQGDVSGEASCESRFEEEKDMAMQESMALVGCSSEKAPHSEWIDVVEMNNHTTQGADVPFAKAVVVSVDQE
IEAVKQDADKVAIVNSESRQDTSGPNNGETIEDLSTLLEPNGSPVSKLSAPKETAASRCNSEEATLNFDDFSSAAEMEVLGLERLKSELQARGLKCGGTLQERAAKFSFL
KSTPLDKLPKKLLAAK