; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC00g0465 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC00g0465
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionhigh mobility group B protein 6
Genome locationscaffold196:81309..82779
RNA-Seq ExpressionMC00g0465
SyntenyMC00g0465
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025412.1 high mobility group B protein 6 [Cucumis melo var. makuwa]7.54e-9579.59Show/hide
Query:  MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKI---KPERIQISLSGDANKENLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDR
        MQ + HPLP   D+PL+SGRRPLQPKNS  LP P+P+VAKI   KPE IQISLSGDANKEN PP     T +IESCD SLADELNAVKRK+ERLRLDG+R
Subjt:  MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKI---KPERIQISLSGDANKENLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDR

Query:  TEKMFRERDAIFELQMKELLRRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESVGENSSLDSSEFVTGI
        TEKM RERD + EL+MKELL+R QEQR+LEMEVDRLFRLKELRSYCMRISPIRSLREKEREKI TDAQFPE E+GDGEESVGENSSLDSSEFVTG 
Subjt:  TEKMFRERDAIFELQMKELLRRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESVGENSSLDSSEFVTGI

XP_004142680.1 high mobility group B protein 6 [Cucumis sativus]1.07e-9480.1Show/hide
Query:  MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKI---KPERIQISLSGDANKENLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDR
        MQ + HPLP   DLPL+SGRRPLQPKNS  LP P+P+VAKI   KPE IQISLSGDANKEN PP     T +IESCD SLADELNAVKRK+ERLRLDG+R
Subjt:  MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKI---KPERIQISLSGDANKENLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDR

Query:  TEKMFRERDAIFELQMKELLRRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESVGENSSLDSSEFVTGI
        TEKM RERD + EL+MKELL+R QEQR+LEMEVDRLFRLKELRSYCMRISPIRSLREKEREKI TDAQFPE E+GDGEESVGENSSLDSSEFVTG 
Subjt:  TEKMFRERDAIFELQMKELLRRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESVGENSSLDSSEFVTGI

XP_008463266.1 PREDICTED: high mobility group B protein 6 [Cucumis melo]2.51e-9379.08Show/hide
Query:  MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKI---KPERIQISLSGDANKENLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDR
        MQ + HPLP   D+PL+SGRRPLQPKNS  LP  +P+VAKI   KPE IQISLSGDANKEN PP     T +IESCD SLADELNAVKRK+ERLRLDG+R
Subjt:  MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKI---KPERIQISLSGDANKENLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDR

Query:  TEKMFRERDAIFELQMKELLRRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESVGENSSLDSSEFVTGI
        TEKM RERD + EL+MKELL+R QEQR+LEMEVDRLFRLKELRSYCMRISPIRSLREKEREKI TDAQFPE E+GDGEESVGENSSLDSSEFVTG 
Subjt:  TEKMFRERDAIFELQMKELLRRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESVGENSSLDSSEFVTGI

XP_022144077.1 high mobility group B protein 6 [Momordica charantia]3.29e-126100Show/hide
Query:  MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKIKPERIQISLSGDANKENLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDRTEK
        MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKIKPERIQISLSGDANKENLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDRTEK
Subjt:  MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKIKPERIQISLSGDANKENLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDRTEK

Query:  MFRERDAIFELQMKELLRRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESVGENSSLDSSEFVTGI
        MFRERDAIFELQMKELLRRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESVGENSSLDSSEFVTGI
Subjt:  MFRERDAIFELQMKELLRRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESVGENSSLDSSEFVTGI

XP_038883293.1 uncharacterized protein LOC120074285 [Benincasa hispida]3.77e-9479.9Show/hide
Query:  MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKI---KPERIQISLSGDANKENLPPIPATATAT---IESCDSSLADELNAVKRKLERLRLD
        MQ + HPL    DLPL+SGRRPLQPKNS  LP   P+VAK    KPERIQISLSGDANKEN PPI ATAT T   IESCDSSLADELNAVKRKLERLRLD
Subjt:  MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKI---KPERIQISLSGDANKENLPPIPATATAT---IESCDSSLADELNAVKRKLERLRLD

Query:  GDRTEKMFRERDAIFELQMKELLRRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESVGENSSLDSSEFVTGI
        G+RTE+M RERD + EL+MKELL+R QEQR+LEMEVDRLFRLKELRSYCMRISPIRSLREKEREKI TDAQFPE E+GDGEESVGENSSLDS+ FVTG 
Subjt:  GDRTEKMFRERDAIFELQMKELLRRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESVGENSSLDSSEFVTGI

TrEMBL top hitse value%identityAlignment
A0A0A0L063 Uncharacterized protein5.19e-9580.1Show/hide
Query:  MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKI---KPERIQISLSGDANKENLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDR
        MQ + HPLP   DLPL+SGRRPLQPKNS  LP P+P+VAKI   KPE IQISLSGDANKEN PP     T +IESCD SLADELNAVKRK+ERLRLDG+R
Subjt:  MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKI---KPERIQISLSGDANKENLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDR

Query:  TEKMFRERDAIFELQMKELLRRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESVGENSSLDSSEFVTGI
        TEKM RERD + EL+MKELL+R QEQR+LEMEVDRLFRLKELRSYCMRISPIRSLREKEREKI TDAQFPE E+GDGEESVGENSSLDSSEFVTG 
Subjt:  TEKMFRERDAIFELQMKELLRRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESVGENSSLDSSEFVTGI

A0A1S3CJ78 high mobility group B protein 61.22e-9379.08Show/hide
Query:  MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKI---KPERIQISLSGDANKENLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDR
        MQ + HPLP   D+PL+SGRRPLQPKNS  LP  +P+VAKI   KPE IQISLSGDANKEN PP     T +IESCD SLADELNAVKRK+ERLRLDG+R
Subjt:  MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKI---KPERIQISLSGDANKENLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDR

Query:  TEKMFRERDAIFELQMKELLRRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESVGENSSLDSSEFVTGI
        TEKM RERD + EL+MKELL+R QEQR+LEMEVDRLFRLKELRSYCMRISPIRSLREKEREKI TDAQFPE E+GDGEESVGENSSLDSSEFVTG 
Subjt:  TEKMFRERDAIFELQMKELLRRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESVGENSSLDSSEFVTGI

A0A5A7SJQ2 High mobility group B protein 63.65e-9579.59Show/hide
Query:  MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKI---KPERIQISLSGDANKENLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDR
        MQ + HPLP   D+PL+SGRRPLQPKNS  LP P+P+VAKI   KPE IQISLSGDANKEN PP     T +IESCD SLADELNAVKRK+ERLRLDG+R
Subjt:  MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKI---KPERIQISLSGDANKENLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDR

Query:  TEKMFRERDAIFELQMKELLRRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESVGENSSLDSSEFVTGI
        TEKM RERD + EL+MKELL+R QEQR+LEMEVDRLFRLKELRSYCMRISPIRSLREKEREKI TDAQFPE E+GDGEESVGENSSLDSSEFVTG 
Subjt:  TEKMFRERDAIFELQMKELLRRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESVGENSSLDSSEFVTGI

A0A5D3CEI7 High mobility group B protein 61.22e-9379.08Show/hide
Query:  MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKI---KPERIQISLSGDANKENLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDR
        MQ + HPLP   D+PL+SGRRPLQPKNS  LP  +P+VAKI   KPE IQISLSGDANKEN PP     T +IESCD SLADELNAVKRK+ERLRLDG+R
Subjt:  MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKI---KPERIQISLSGDANKENLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDR

Query:  TEKMFRERDAIFELQMKELLRRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESVGENSSLDSSEFVTGI
        TEKM RERD + EL+MKELL+R QEQR+LEMEVDRLFRLKELRSYCMRISPIRSLREKEREKI TDAQFPE E+GDGEESVGENSSLDSSEFVTG 
Subjt:  TEKMFRERDAIFELQMKELLRRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESVGENSSLDSSEFVTGI

A0A6J1CSN6 high mobility group B protein 61.59e-126100Show/hide
Query:  MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKIKPERIQISLSGDANKENLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDRTEK
        MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKIKPERIQISLSGDANKENLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDRTEK
Subjt:  MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKIKPERIQISLSGDANKENLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDRTEK

Query:  MFRERDAIFELQMKELLRRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESVGENSSLDSSEFVTGI
        MFRERDAIFELQMKELLRRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESVGENSSLDSSEFVTGI
Subjt:  MFRERDAIFELQMKELLRRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESVGENSSLDSSEFVTGI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G23800.1 HMG (high mobility group) box protein3.8e-0427.42Show/hide
Query:  PAVAKIKPERIQISLSGDANKENLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDRTEKMFRERDAIFELQMKELLRRGQEQRELEMEVDRLFR
        PA  K KP   + +L         PP P +          S   +L  ++  LE+++++ D+TE++ +E+D I   + +EL  R  EQ +L++E+ +L +
Subjt:  PAVAKIKPERIQISLSGDANKENLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDRTEKMFRERDAIFELQMKELLRRGQEQRELEMEVDRLFR

Query:  LKELRSYCMRISPIRSLREKEREK
        +KE +          SL + E+EK
Subjt:  LKELRSYCMRISPIRSLREKEREK

AT4G23800.2 HMG (high mobility group) box protein3.8e-0427.42Show/hide
Query:  PAVAKIKPERIQISLSGDANKENLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDRTEKMFRERDAIFELQMKELLRRGQEQRELEMEVDRLFR
        PA  K KP   + +L         PP P +          S   +L  ++  LE+++++ D+TE++ +E+D I   + +EL  R  EQ +L++E+ +L +
Subjt:  PAVAKIKPERIQISLSGDANKENLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDRTEKMFRERDAIFELQMKELLRRGQEQRELEMEVDRLFR

Query:  LKELRSYCMRISPIRSLREKEREK
        +KE +          SL + E+EK
Subjt:  LKELRSYCMRISPIRSLREKEREK

AT5G01910.1 unknown protein3.7e-2345.68Show/hide
Query:  SGRRPLQPKNSNSLPTPLPAVAKIKPERIQISLSGDANKENLPPIPATATATIE-SCDSSLADELNAVKRKLERLRLDGDRTEKMFRERDAIFELQMKEL
        SGR+ LQP+  N   TP      +KP+      + +  KENL          +E S D+SLA+EL+A K+KLERLR D + TEK+ +ERD   +L M  L
Subjt:  SGRRPLQPKNSNSLPTPLPAVAKIKPERIQISLSGDANKENLPPIPATATATIE-SCDSSLADELNAVKRKLERLRLDGDRTEKMFRERDAIFELQMKEL

Query:  LRRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESV
        L+RG+ Q+ LE++VDRLFRLKEL +Y  +ISPIRSLR KE+++ +    F   E  D E SV
Subjt:  LRRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESV

AT5G01910.2 unknown protein2.4e-2247.55Show/hide
Query:  SGRRPLQPKNSNSLPTPLPAVAKIKPERIQISLSGDANKENLPPIPATATATIE-SCDSSLADELNAVKRKLERLRLDGDRTEKMFRERDAIFELQMKEL
        SGR+ LQP+  N   TP      +KP+      + +  KENL          +E S D+SLA+EL+A K+KLERLR D + TEK+ +ERD   +L M  L
Subjt:  SGRRPLQPKNSNSLPTPLPAVAKIKPERIQISLSGDANKENLPPIPATATATIE-SCDSSLADELNAVKRKLERLRLDGDRTEKMFRERDAIFELQMKEL

Query:  LRRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREK
        L+RG+ Q+ LE++VDRLFRLKEL +Y  +ISPIRSLR KE+++
Subjt:  LRRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGCCATTCTCCATCCCCTGCCCGGAGCTCACGATCTCCCTCTAAGATCCGGCCGGCGGCCTCTCCAGCCGAAGAATTCCAATTCCCTGCCAACTCCTCTACCCGC
CGTCGCCAAAATCAAGCCCGAACGCATCCAGATCTCGCTCTCCGGCGACGCCAACAAGGAGAACCTTCCGCCGATTCCAGCGACAGCGACGGCGACGATCGAGTCCTGTG
ATTCGTCACTTGCGGATGAGCTCAATGCGGTCAAGAGGAAGCTCGAGAGATTGAGATTGGACGGCGACAGGACGGAGAAGATGTTCAGAGAGAGGGATGCGATCTTCGAG
TTGCAGATGAAGGAGCTGCTGAGGAGAGGTCAAGAGCAGAGGGAACTAGAGATGGAGGTCGATAGGTTATTCAGATTGAAGGAACTCAGATCTTACTGTATGAGAATTTC
TCCGATTCGGAGTCTCAGAGAAAAAGAGCGAGAAAAGATCATCACCGATGCACAATTTCCGGAAATTGAAGTCGGCGATGGAGAAGAATCTGTTGGCGAGAATTCATCGC
TGGATTCTTCAGAATTCGTCACAGGTATATGA
mRNA sequenceShow/hide mRNA sequence
TACAAATACTAAAAGAACAAAAATTGAAAGCACAATAATCAAAATGAACCAAAATCAAAAGTAAAGGGATCAAAATAGTATTTAAACAGAAATTCTTCGTCCGCTTGGAG
CATGGCCCCGCACGCACGCGACTTGACCCGATCGAACCCGGTGGACAACTTTTGTCTTTTCCTAACTTAAATAAAGTAAGTAATACAATAAACAAAAGTCTGATTATTAT
ATCAAGTAGCCGTTGGCGCCTGTCTAGTTTCAAATTCAAAACCCTAATCTTCTGAAATCCCTCTTTTCTTTTTCTATGACTCCACTTCTCTTCCACAGCAAATCTCCAGA
TTCTCTCCCAAAATGCAGGCCATTCTCCATCCCCTGCCCGGAGCTCACGATCTCCCTCTAAGATCCGGCCGGCGGCCTCTCCAGCCGAAGAATTCCAATTCCCTGCCAAC
TCCTCTACCCGCCGTCGCCAAAATCAAGCCCGAACGCATCCAGATCTCGCTCTCCGGCGACGCCAACAAGGAGAACCTTCCGCCGATTCCAGCGACAGCGACGGCGACGA
TCGAGTCCTGTGATTCGTCACTTGCGGATGAGCTCAATGCGGTCAAGAGGAAGCTCGAGAGATTGAGATTGGACGGCGACAGGACGGAGAAGATGTTCAGAGAGAGGGAT
GCGATCTTCGAGTTGCAGATGAAGGAGCTGCTGAGGAGAGGTCAAGAGCAGAGGGAACTAGAGATGGAGGTCGATAGGTTATTCAGATTGAAGGAACTCAGATCTTACTG
TATGAGAATTTCTCCGATTCGGAGTCTCAGAGAAAAAGAGCGAGAAAAGATCATCACCGATGCACAATTTCCGGAAATTGAAGTCGGCGATGGAGAAGAATCTGTTGGCG
AGAATTCATCGCTGGATTCTTCAGAATTCGTCACAGGTATATGACGACGAATCGTTTCAGTTTTGTTCGCCGCTTTTGATTTTGCCCAACTTTCCGATTAATTTTCCTTC
TAGTTCTGGTTCTTCATCTTCTTTGGAATTCTGCTAAAAGTGGCATTCAAAGGTCAAACAAAATTCAATGTAATACCTCATTATGTTCTTCTTTTGGTTGCTGGAACGGA
AATCTTGAAGTGTAATCAACATCATTCTCCATCTTTTTCACTTCATTTATTGTCTGTAAATGAAGAAATTCCAAATCCGCATCTGTGGATTGAAGTTTAGACATTGATTC
AATCTAAACAGATTAAAATTTTCTGATTTTGAATTTTAATTTTTCAAGTGTTCATAATAAAATCTATTAGGATC
Protein sequenceShow/hide protein sequence
MQAILHPLPGAHDLPLRSGRRPLQPKNSNSLPTPLPAVAKIKPERIQISLSGDANKENLPPIPATATATIESCDSSLADELNAVKRKLERLRLDGDRTEKMFRERDAIFE
LQMKELLRRGQEQRELEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIITDAQFPEIEVGDGEESVGENSSLDSSEFVTGI