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MC00g0467 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC00g0467
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRING-H2 finger protein ATL74-like
Genome locationscaffold196:113309..113452
RNA-Seq ExpressionMC00g0467
SyntenyMC00g0467
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025403.1 RING-H2 finger protein ATL74 [Cucumis melo var. makuwa]3.37e-2382.98Show/hide
Query:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSL
        ECAICLGEFE G+DLRILP C+HGFHV+CID W VSHSSCPNCRHS+
Subjt:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSL

XP_008463261.1 PREDICTED: RING-H2 finger protein ATL74 [Cucumis melo]3.37e-2382.98Show/hide
Query:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSL
        ECAICLGEFE G+DLRILP C+HGFHV+CID W VSHSSCPNCRHS+
Subjt:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSL

XP_011653722.1 RING-H2 finger protein ATL74 isoform X1 [Cucumis sativus]3.29e-2280.85Show/hide
Query:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSL
        ECAICLGEFE G+ LRI+P C+HGFHV+CID W VSHSSCPNCRHSL
Subjt:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSL

XP_022144089.1 RING-H2 finger protein ATL74-like [Momordica charantia]3.00e-30100Show/hide
Query:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSLL
        ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSLL
Subjt:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSLL

XP_022930638.1 RING-H2 finger protein ATL74-like [Cucurbita moschata]2.67e-2379.17Show/hide
Query:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSLL
        +CAICLGEFE+GD +R+LPNC+HGFHV CID W +SHSSCPNCRHSLL
Subjt:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSLL

TrEMBL top hitse value%identityAlignment
A0A1S3CKD5 RING-H2 finger protein ATL741.63e-2382.98Show/hide
Query:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSL
        ECAICLGEFE G+DLRILP C+HGFHV+CID W VSHSSCPNCRHS+
Subjt:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSL

A0A5A7SL64 RING-H2 finger protein ATL741.63e-2382.98Show/hide
Query:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSL
        ECAICLGEFE G+DLRILP C+HGFHV+CID W VSHSSCPNCRHS+
Subjt:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSL

A0A5D3CEJ5 RING-H2 finger protein ATL741.63e-2382.98Show/hide
Query:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSL
        ECAICLGEFE G+DLRILP C+HGFHV+CID W VSHSSCPNCRHS+
Subjt:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSL

A0A6J1CR99 RING-H2 finger protein ATL74-like1.45e-30100Show/hide
Query:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSLL
        ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSLL
Subjt:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSLL

A0A6J1EVU3 RING-H2 finger protein ATL74-like1.29e-2379.17Show/hide
Query:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSLL
        +CAICLGEFE+GD +R+LPNC+HGFHV CID W +SHSSCPNCRHSLL
Subjt:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSLL

SwissProt top hitse value%identityAlignment
Q8LC69 RING-H2 finger protein ATL88.9e-1668.75Show/hide
Query:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSLL
        ECAICL EF  GD+LR+LP C HGFHV+CID W  SHSSCP+CR  L+
Subjt:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSLL

Q9FLC6 RING-H2 finger protein ATL731.2e-1566.67Show/hide
Query:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSLL
        EC ICLG+F  G+ +R+LP C+HGFHV CID W +SHSSCP CR SLL
Subjt:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSLL

Q9LM69 RING-H2 finger protein ATL808.9e-1668.75Show/hide
Query:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSLL
        ECAICL EF  GD+LR+LP C HGFHV CID W  SHSSCP+CR  L+
Subjt:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSLL

Q9LZV8 RING-H2 finger protein ATL743.6e-1770.83Show/hide
Query:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSLL
        ECAICLGEF  G+ +R+LP C+H FH++CID W VSHSSCPNCRHSL+
Subjt:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSLL

Q9SG96 RING-H2 finger protein ATL721.5e-1566.67Show/hide
Query:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSLL
        EC ICLG+FE G+ +R+LP C+HGFHV CID W +S SSCP CR SLL
Subjt:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSLL

Arabidopsis top hitse value%identityAlignment
AT1G20823.1 RING/U-box superfamily protein6.3e-1768.75Show/hide
Query:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSLL
        ECAICL EF  GD+LR+LP C HGFHV CID W  SHSSCP+CR  L+
Subjt:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSLL

AT1G76410.1 RING/U-box superfamily protein6.3e-1768.75Show/hide
Query:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSLL
        ECAICL EF  GD+LR+LP C HGFHV+CID W  SHSSCP+CR  L+
Subjt:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSLL

AT3G10910.1 RING/U-box superfamily protein1.1e-1666.67Show/hide
Query:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSLL
        EC ICLG+FE G+ +R+LP C+HGFHV CID W +S SSCP CR SLL
Subjt:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSLL

AT5G01880.1 RING/U-box superfamily protein2.6e-1870.83Show/hide
Query:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSLL
        ECAICLGEF  G+ +R+LP C+H FH++CID W VSHSSCPNCRHSL+
Subjt:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSLL

AT5G05280.1 RING/U-box superfamily protein8.2e-1766.67Show/hide
Query:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSLL
        EC ICLG+F  G+ +R+LP C+HGFHV CID W +SHSSCP CR SLL
Subjt:  ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAATGCGCGATTTGTTTGGGGGAATTTGAAATTGGCGACGATTTGAGGATTTTGCCCAATTGCAGCCATGGATTCCATGTGAATTGTATCGATCATTGGTTCGTCTCCCA
CTCTTCGTGCCCTAATTGCCGGCATTCTCTGCTG
mRNA sequenceShow/hide mRNA sequence
GAATGCGCGATTTGTTTGGGGGAATTTGAAATTGGCGACGATTTGAGGATTTTGCCCAATTGCAGCCATGGATTCCATGTGAATTGTATCGATCATTGGTTCGTCTCCCA
CTCTTCGTGCCCTAATTGCCGGCATTCTCTGCTG
Protein sequenceShow/hide protein sequence
ECAICLGEFEIGDDLRILPNCSHGFHVNCIDHWFVSHSSCPNCRHSLL