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MC00g0470 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC00g0470
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionSAUR-like auxin-responsive protein family
Genome locationscaffold196:128700..128897
RNA-Seq ExpressionMC00g0470
SyntenyMC00g0470
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8399813.1 hypothetical protein HHK36_015684 [Tetracentron sinense]8.66e-1459.38Show/hide
Query:  GASEGHFV-VYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRDGEDGKLMLPCSIQLFEWVLD
        G   G F+ +YVGEE+KR+VVPL YLSS +FQALL QFE+ I     G + LPCS Q+FE VLD
Subjt:  GASEGHFV-VYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRDGEDGKLMLPCSIQLFEWVLD

KAF8402501.1 hypothetical protein HHK36_010586 [Tetracentron sinense]5.24e-1858.73Show/hide
Query:  EGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRDGEDGKLMLPCSIQLFEWVLDLVN
        EG   +YVGEE+ + VVPLK LSS MFQALLNQFE+ I    +G + +PCS Q+F+WVLDL  
Subjt:  EGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRDGEDGKLMLPCSIQLFEWVLDLVN

KAF9591132.1 hypothetical protein IFM89_002087 [Coptis chinensis]5.26e-1450Show/hide
Query:  EGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRD---------GEDGKLMLPCSIQLFEWVLDL
        EG+ ++YVGEE K ++V L+YLS  MFQALLNQFE  +R+           +G ++LPCS++LFE VL+L
Subjt:  EGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRD---------GEDGKLMLPCSIQLFEWVLDL

KDO87260.1 hypothetical protein CISIN_1g041682mg [Citrus sinensis]4.55e-1244.44Show/hide
Query:  EGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRDGEDGKLMLPCSIQLFEWVLDLVN
        +G  V+Y+GE +++ VVP++ LSS+MF+ALLNQFE   +      ++LPCS  +F+W+L+L +
Subjt:  EGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRDGEDGKLMLPCSIQLFEWVLDLVN

PON94429.1 Small auxin-up RNA [Trema orientale]5.70e-1552.38Show/hide
Query:  EGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRDGEDGKLMLPCSIQLFEWVLDLVN
        EG F +YVGEE KR+VVPL +LS+ +FQALLNQF   IR   D  + +PCS ++FE +L  ++
Subjt:  EGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRDGEDGKLMLPCSIQLFEWVLDLVN

TrEMBL top hitse value%identityAlignment
A0A067H8G4 Uncharacterized protein2.20e-1244.44Show/hide
Query:  EGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRDGEDGKLMLPCSIQLFEWVLDLVN
        +G  V+Y+GE +++ VVP++ LSS+MF+ALLNQFE   +      ++LPCS  +F+W+L+L +
Subjt:  EGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRDGEDGKLMLPCSIQLFEWVLDLVN

A0A2N9G5D1 Uncharacterized protein6.00e-1453.45Show/hide
Query:  VYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRDGEDGKLMLPCSIQLFEWVLDLVN
        ++VGEE+K +V+P   LSS MFQAL NQFE+ I  G+   + LPCS Q+FEW+L+L  
Subjt:  VYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRDGEDGKLMLPCSIQLFEWVLDLVN

A0A2N9G647 Uncharacterized protein5.25e-1451.61Show/hide
Query:  GHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRDGEDGKLMLPCSIQLFEWVLDLVN
        G   ++VGEE+K +V+P   LSS MFQAL NQFE  I   +   +MLPCS Q+FEW+L+L  
Subjt:  GHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRDGEDGKLMLPCSIQLFEWVLDLVN

A0A2N9J801 Uncharacterized protein2.88e-1451.61Show/hide
Query:  GHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRDGEDGKLMLPCSIQLFEWVLDLVN
        G   ++VGEE+K +V+P   LSS MFQAL NQFE+ I  G+   + LPCS Q+FEW+L+L  
Subjt:  GHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRDGEDGKLMLPCSIQLFEWVLDLVN

A0A2P5F9G2 Small auxin-up RNA2.76e-1552.38Show/hide
Query:  EGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRDGEDGKLMLPCSIQLFEWVLDLVN
        EG F +YVGEE KR+VVPL +LS+ +FQALLNQF   IR   D  + +PCS ++FE +L  ++
Subjt:  EGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRDGEDGKLMLPCSIQLFEWVLDLVN

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR502.3e-0635.48Show/hide
Query:  EGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRDGEDGKLMLPCSIQLFEWVLDLV
        +GHF VYVGE + R++VP+ +L+   FQ+LL + E       D  L +PC   +F+ +  ++
Subjt:  EGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRDGEDGKLMLPCSIQLFEWVLDLV

P32295 Indole-3-acetic acid-induced protein ARG71.4e-0642.62Show/hide
Query:  ASEGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNI-RDGEDGKLMLPCSIQLFEWV
        A +G+  VYVGE  KR V+P+ +L+  +FQ LL+Q E     D   G L +PCS  LF+ +
Subjt:  ASEGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNI-RDGEDGKLMLPCSIQLFEWV

P33081 Auxin-induced protein 15A4.6e-0740.91Show/hide
Query:  ASEGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNI-RDGEDGKLMLPCSIQLFEWVLDLVN
        A +G+  VYVGE+ KR V+P+ YL+   FQ LL+Q E     D   G L +PCS  +F+ +   +N
Subjt:  ASEGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNI-RDGEDGKLMLPCSIQLFEWVLDLVN

P33082 Auxin-induced protein X151.0e-0639.39Show/hide
Query:  ASEGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNI-RDGEDGKLMLPCSIQLFEWVLDLVN
        A +G+  VYVGE+ KR V+P+ Y++   FQ LL Q E     D   G L +PCS ++F+ +   +N
Subjt:  ASEGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNI-RDGEDGKLMLPCSIQLFEWVLDLVN

P33083 Auxin-induced protein 6B3.0e-0637.5Show/hide
Query:  EGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNI-RDGEDGKLMLPCSIQLFEWVLDLVN
        +G+  VYVGE+ +R V+P+ YL+   FQ LL+Q E        +G L +PCS  +F+ +   +N
Subjt:  EGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNI-RDGEDGKLMLPCSIQLFEWVLDLVN

Arabidopsis top hitse value%identityAlignment
AT1G75580.1 SAUR-like auxin-responsive protein family9.6e-0845.45Show/hide
Query:  EGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRDGEDGKLMLPCSIQLF
        +GHFVVYVGE + R+VVP+ +L+   FQ LL Q E       D  L +PC   +F
Subjt:  EGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRDGEDGKLMLPCSIQLF

AT2G37030.1 SAUR-like auxin-responsive protein family1.3e-0743.55Show/hide
Query:  EGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRDGEDGKLMLPCSIQLFEWVLDLV
        +GH VVYVGEE KR V+ +  L   +FQALL+Q ++      D +L +PC+   F   LD+V
Subjt:  EGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRDGEDGKLMLPCSIQLFEWVLDLV

AT5G20810.1 SAUR-like auxin-responsive protein family5.6e-0835.59Show/hide
Query:  EGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRDGEDGKLMLPCSIQLFEWVL
        +G+  VYVG E +R ++P  YLS  +F+ LL + E      + G L +PC ++ F+++L
Subjt:  EGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRDGEDGKLMLPCSIQLFEWVL

AT5G20810.2 SAUR-like auxin-responsive protein family5.6e-0835.59Show/hide
Query:  EGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRDGEDGKLMLPCSIQLFEWVL
        +G+  VYVG E +R ++P  YLS  +F+ LL + E      + G L +PC ++ F+++L
Subjt:  EGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRDGEDGKLMLPCSIQLFEWVL

AT5G66260.1 SAUR-like auxin-responsive protein family2.7e-1039.39Show/hide
Query:  GASEGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRDGEDGKLMLPCSIQLFEWVLDLVN
        G  +GHFVVYVG  + RHV+P+ +L+  +FQ LL Q E      +D  L +PC    F  ++  +N
Subjt:  GASEGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRDGEDGKLMLPCSIQLFEWVLDLVN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGAGCTTCGGAAGGCCATTTTGTAGTCTATGTGGGGGAAGAGCAAAAACGACATGTTGTTCCATTAAAGTACTTGTCGTCGATCATGTTTCAAGCATTACTGAACCAATT
TGAAAACAACATTCGGGACGGAGAAGATGGGAAGTTGATGCTACCTTGCTCCATCCAACTATTTGAATGGGTCTTGGATTTGGTGAAC
mRNA sequenceShow/hide mRNA sequence
GGAGCTTCGGAAGGCCATTTTGTAGTCTATGTGGGGGAAGAGCAAAAACGACATGTTGTTCCATTAAAGTACTTGTCGTCGATCATGTTTCAAGCATTACTGAACCAATT
TGAAAACAACATTCGGGACGGAGAAGATGGGAAGTTGATGCTACCTTGCTCCATCCAACTATTTGAATGGGTCTTGGATTTGGTGAAC
Protein sequenceShow/hide protein sequence
GASEGHFVVYVGEEQKRHVVPLKYLSSIMFQALLNQFENNIRDGEDGKLMLPCSIQLFEWVLDLVN