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MC00g0651 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC00g0651
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionIST1 homolog
Genome locationscaffold191:249426..249698
RNA-Seq ExpressionMC00g0651
SyntenyMC00g0651
Gene Ontology termsGO:0015031 - protein transport (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155211.1 IST1 homolog [Momordica charantia]5.43e-5198.9Show/hide
Query:  GKQEPDRHHTFSPINNTMINEIKPASKNFNFKPEVDAKLDTIPPPSDILEKARAAIASAERATAAARVAAELTNVNLGAMKLEGGAQASDC
        GKQEPDRHHTFSPINNT INEIKPASKNFNFKPEVDAKLDTIPPPSDILEKARAAIASAERATAAARVAAELTNVNLGAMKLEGGAQASDC
Subjt:  GKQEPDRHHTFSPINNTMINEIKPASKNFNFKPEVDAKLDTIPPPSDILEKARAAIASAERATAAARVAAELTNVNLGAMKLEGGAQASDC
XP_022971810.1 IST1 homolog isoform X2 [Cucurbita maxima]3.18e-3274.44Show/hide
Query:  KQEPDRHHTFSPINNTMINEIKPASKNFNFKPEVDAKLDTIPPPSDILEKARAAIASAERATAAARVAAELTNVNLGAMKLEGGAQASDC
        KQEP+ HHTF+  +N+  ++IKP  KNF+ KPEV +KLD  PPPSD+LEKARAAIASAERATAAARVAAEL NVNLGAMKLEGG QAS+C
Subjt:  KQEPDRHHTFSPINNTMINEIKPASKNFNFKPEVDAKLDTIPPPSDILEKARAAIASAERATAAARVAAELTNVNLGAMKLEGGAQASDC
XP_023538831.1 IST1 homolog isoform X1 [Cucurbita pepo subsp. pepo]1.94e-3275.56Show/hide
Query:  KQEPDRHHTFSPINNTMINEIKPASKNFNFKPEVDAKLDTIPPPSDILEKARAAIASAERATAAARVAAELTNVNLGAMKLEGGAQASDC
        KQEP+ HHTF+ I+N+  ++IKP  KNF+ KPEV +KLDT PPP D+LEKARAAIASAERATAAARVAAEL NVNLGAMKLEGG QAS+C
Subjt:  KQEPDRHHTFSPINNTMINEIKPASKNFNFKPEVDAKLDTIPPPSDILEKARAAIASAERATAAARVAAELTNVNLGAMKLEGGAQASDC
XP_023538839.1 IST1 homolog isoform X2 [Cucurbita pepo subsp. pepo]8.22e-3375.56Show/hide
Query:  KQEPDRHHTFSPINNTMINEIKPASKNFNFKPEVDAKLDTIPPPSDILEKARAAIASAERATAAARVAAELTNVNLGAMKLEGGAQASDC
        KQEP+ HHTF+ I+N+  ++IKP  KNF+ KPEV +KLDT PPP D+LEKARAAIASAERATAAARVAAEL NVNLGAMKLEGG QAS+C
Subjt:  KQEPDRHHTFSPINNTMINEIKPASKNFNFKPEVDAKLDTIPPPSDILEKARAAIASAERATAAARVAAELTNVNLGAMKLEGGAQASDC
XP_038875452.1 IST1 homolog [Benincasa hispida]3.69e-3275.82Show/hide
Query:  GKQEPDRHHTFSPINNTMINEIKPASKNFNFKPEVDAKLDTIPPPSDILEKARAAIASAERATAAARVAAELTNVNLGAMKLEGGAQASDC
        GKQEP+RHHTFSPI+N + +EIK   K F+ KPEV AKLDT PPPSD+LEKA+AAIASAERATAAARVAAEL NV LGAMK EGG Q S+C
Subjt:  GKQEPDRHHTFSPINNTMINEIKPASKNFNFKPEVDAKLDTIPPPSDILEKARAAIASAERATAAARVAAELTNVNLGAMKLEGGAQASDC
TrEMBL top hitse value%identityAlignment
A0A6J1DR13 IST1 homolog2.63e-5198.9Show/hide
Query:  GKQEPDRHHTFSPINNTMINEIKPASKNFNFKPEVDAKLDTIPPPSDILEKARAAIASAERATAAARVAAELTNVNLGAMKLEGGAQASDC
        GKQEPDRHHTFSPINNT INEIKPASKNFNFKPEVDAKLDTIPPPSDILEKARAAIASAERATAAARVAAELTNVNLGAMKLEGGAQASDC
Subjt:  GKQEPDRHHTFSPINNTMINEIKPASKNFNFKPEVDAKLDTIPPPSDILEKARAAIASAERATAAARVAAELTNVNLGAMKLEGGAQASDC
A0A6J1E1A6 IST1 homolog isoform X21.23e-3173.33Show/hide
Query:  KQEPDRHHTFSPINNTMINEIKPASKNFNFKPEVDAKLDTIPPPSDILEKARAAIASAERATAAARVAAELTNVNLGAMKLEGGAQASDC
        KQEP+ HHT + I+N+ +++IKP  KNF+ K E  +KLDT PPPSD+LEKARAAIASAERATAAARVAAEL NVNLGAMKLEGG QAS+C
Subjt:  KQEPDRHHTFSPINNTMINEIKPASKNFNFKPEVDAKLDTIPPPSDILEKARAAIASAERATAAARVAAELTNVNLGAMKLEGGAQASDC
A0A6J1E6L9 IST1 homolog isoform X12.84e-3173.33Show/hide
Query:  KQEPDRHHTFSPINNTMINEIKPASKNFNFKPEVDAKLDTIPPPSDILEKARAAIASAERATAAARVAAELTNVNLGAMKLEGGAQASDC
        KQEP+ HHT + I+N+ +++IKP  KNF+ K E  +KLDT PPPSD+LEKARAAIASAERATAAARVAAEL NVNLGAMKLEGG QAS+C
Subjt:  KQEPDRHHTFSPINNTMINEIKPASKNFNFKPEVDAKLDTIPPPSDILEKARAAIASAERATAAARVAAELTNVNLGAMKLEGGAQASDC
A0A6J1I6R9 IST1 homolog isoform X21.54e-3274.44Show/hide
Query:  KQEPDRHHTFSPINNTMINEIKPASKNFNFKPEVDAKLDTIPPPSDILEKARAAIASAERATAAARVAAELTNVNLGAMKLEGGAQASDC
        KQEP+ HHTF+  +N+  ++IKP  KNF+ KPEV +KLD  PPPSD+LEKARAAIASAERATAAARVAAEL NVNLGAMKLEGG QAS+C
Subjt:  KQEPDRHHTFSPINNTMINEIKPASKNFNFKPEVDAKLDTIPPPSDILEKARAAIASAERATAAARVAAELTNVNLGAMKLEGGAQASDC
A0A6J1I9L3 IST1 homolog isoform X13.61e-3274.44Show/hide
Query:  KQEPDRHHTFSPINNTMINEIKPASKNFNFKPEVDAKLDTIPPPSDILEKARAAIASAERATAAARVAAELTNVNLGAMKLEGGAQASDC
        KQEP+ HHTF+  +N+  ++IKP  KNF+ KPEV +KLD  PPPSD+LEKARAAIASAERATAAARVAAEL NVNLGAMKLEGG QAS+C
Subjt:  KQEPDRHHTFSPINNTMINEIKPASKNFNFKPEVDAKLDTIPPPSDILEKARAAIASAERATAAARVAAELTNVNLGAMKLEGGAQASDC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G25420.1 Regulator of Vps4 activity in the MVB pathway protein1.8e-0445Show/hide
Query:  NEIKPASKNFNFKPEVDAKLDTIPPPSDILEKARAAIASAERATAAARVAAELTNVNLGA
        N +  +  +        A  DT    +D++E ARAA+ASA+RATAAAR AA+L NV+ GA
Subjt:  NEIKPASKNFNFKPEVDAKLDTIPPPSDILEKARAAIASAERATAAARVAAELTNVNLGA
AT1G25420.2 Regulator of Vps4 activity in the MVB pathway protein1.8e-0445Show/hide
Query:  NEIKPASKNFNFKPEVDAKLDTIPPPSDILEKARAAIASAERATAAARVAAELTNVNLGA
        N +  +  +        A  DT    +D++E ARAA+ASA+RATAAAR AA+L NV+ GA
Subjt:  NEIKPASKNFNFKPEVDAKLDTIPPPSDILEKARAAIASAERATAAARVAAELTNVNLGA
AT1G25420.3 Regulator of Vps4 activity in the MVB pathway protein1.8e-0445Show/hide
Query:  NEIKPASKNFNFKPEVDAKLDTIPPPSDILEKARAAIASAERATAAARVAAELTNVNLGA
        N +  +  +        A  DT    +D++E ARAA+ASA+RATAAAR AA+L NV+ GA
Subjt:  NEIKPASKNFNFKPEVDAKLDTIPPPSDILEKARAAIASAERATAAARVAAELTNVNLGA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGAAAGCAAGAACCTGATCGCCACCATACATTCAGCCCAATTAACAATACTATGATAAATGAAATAAAACCAGCATCGAAGAATTTTAATTTCAAACCAGAAGTTGATGC
TAAATTAGACACAATACCACCTCCATCCGACATATTAGAGAAAGCCAGAGCTGCCATCGCTTCAGCTGAACGTGCCACTGCAGCAGCCCGTGTAGCTGCCGAGCTAACTA
ATGTCAACCTTGGAGCAATGAAGCTTGAAGGAGGAGCACAAGCTTCTGATTGT
mRNA sequenceShow/hide mRNA sequence
GGAAAGCAAGAACCTGATCGCCACCATACATTCAGCCCAATTAACAATACTATGATAAATGAAATAAAACCAGCATCGAAGAATTTTAATTTCAAACCAGAAGTTGATGC
TAAATTAGACACAATACCACCTCCATCCGACATATTAGAGAAAGCCAGAGCTGCCATCGCTTCAGCTGAACGTGCCACTGCAGCAGCCCGTGTAGCTGCCGAGCTAACTA
ATGTCAACCTTGGAGCAATGAAGCTTGAAGGAGGAGCACAAGCTTCTGATTGT
Protein sequenceShow/hide protein sequence
GKQEPDRHHTFSPINNTMINEIKPASKNFNFKPEVDAKLDTIPPPSDILEKARAAIASAERATAAARVAAELTNVNLGAMKLEGGAQASDC